Array 1 373502-373709 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP052132.1 Burkholderia glumae strain HN2 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 373502 28 100.0 32 ............................ GTAGGTTTCCTCGGGCTCCGTGGCGCCGCGCA 373562 28 100.0 32 ............................ ATCAGCGCGAACTGTGGGCCGTGGCGGCTCGT 373622 28 100.0 32 ............................ GCGCGCCGCGTCATCATGCGCCGCGACGGCGA 373682 28 92.9 0 ..........................GG | ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTTTGCTGCCGGGTAGGCAGCTTAGAAA # Left flank : TTCCGAGGCGGTTTTCACCAGCGTGCGGAACGCCGCCGCGTCGAGCGGCTTCGGATTCTTCTTGTCGCGCCCCATCGTCCAGGGGCCGACCAGCGCCGGCTCTGCCTCGCCGTCCTTGATCATCGCGACGGCCCAGCCGTCGTCGTCCTCGTTCTTGATCACGCGCGCGGTCCAGCCGCTGTCGTGCCAGAGGCCGTCCTCGTGGATCGGGCTGTCGTCCTGGGCTGGGTCGGTATCGGTGGCGTGGTCGGTCATGAGGCGTCGGGCGCGGGTTCGGGGGCTTGGGTGGGCGGCTATTGTAAACGTTTCGATCGGCGGCAATGGTGCGCGCCGCCGCAGCTGGCCGTGCGGCCGGGTGGTGGCTGCTGAACCCTTTTTTCGGCAGAATGCGCGAGGGGCTGCAAAATCAATGGGTTAGCGAGAGGCGGGAAATTTGGGGTGTGCGAGGTGTCGGGCGGGAATTGGTTTTTGAATCAAGGGGGTAGGTGGGTTTTTGTTCA # Right flank : GCCAGTTCAAAAACCCTGCTCAGCTCGTCTGAAGATGTTCCAACAGATGATCGAGCAGCCAAGTTTGAGGAATGCTTCGTGAATGTAGGCACGTCGCTCGAAGCGAGTGCGTAGGCGCCGGAAATTGTGGAGCCAGGAATGCGTACGTTCGACCACCCAACGATACTTGCCCAGACCACTGCCATGCTCGGTCCGGCGCTTGGCGATCACGGGCTTGATACCGCGTTCGCGCAACGCGCGACGATGTCGGGTGGAATCGTAGCCGCGATCGGCGTAGACGACGCCGGGCTTCTGAAGCGGTCGGCCACGAACGCCGCGAATGGGTGGAATCGCATCAACGAGCGGCAGCAACTGCGTGACGTCGTTGGTGTTCGCGCCAGTCAGGATCGCAACGAGAGGAACGCCGTTGGCGTCTACGAGGACGTGGTGCTTGGAACCGGGTCGCGCGCGATCGGTGGGGTTCGGGCCAGTTTTTCGCCCGCCCCAACGGCGCGCACGGA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTGCCGGGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTGCTGCCGGATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 374944-374616 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP052132.1 Burkholderia glumae strain HN2 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 374943 28 100.0 32 ............................ ACCGTCTCGCCGTGGAAAGTGATCTTGTCATC 374883 28 100.0 32 ............................ AGTTCACGGCGCACACGGCGCGCATTCGCAGA 374823 28 100.0 32 ............................ AGTTCACGGCGCACACGGCGCGCATTCGCAGA 374763 28 100.0 32 ............................ TTCATAGGGCTCCCGAATGGTTAGGTTGCAGG 374703 28 100.0 32 ............................ TGCGCCGGGGCTCGCTCGTTGTTCGCGAAACC 374643 28 92.9 0 ..........................GG | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.8 32 GTTCGCTGCCGTGTAGGCAGCTTAGAAA # Left flank : GATCGGTGGGGTTCGGGCCAGTTTTTCGCCCGCCCCAACGGCGCGCACGGACGACGAATCGACCGCAGCGTATGACAGATCGATTTGGCCGGCCGCACGCAACTTGTCGAGTAGCAACTCGTGCAGTTGGTCCCATACACCAGCCTTTTGCCAGTCGCCAATCGCCGCCAGCATGTGGCGCCCGAGCCAAAGCCCAGACGAGTCGGCAAGTGGTTCCAACGAATTCCCGTTTTGAACACGAACAGGATGCCGTTGAGAGCCGCACGGTCGGACACGCGCGGGCGACCAGGATCGCTCTTCGCTCGAAGCTTCGCAGGTGGCAGCAATGGTTCGATCAGTATCCACAGTTCGTCGTCAATGATTGGCGCTTCCATCCTTGGACTTCCGTTGTTCTGATGCCCAAGGTTAACAGCTTGCCGAGGAAGTAAACAGCCCCTCTCGGGAGTTTTTGAACTGGCCTCTTAGAAATTGACGACTGCAAACGCGCCGGGCGCGAGCCA # Right flank : CCAGTTCAAAAACTCCCGAGAGGGGCTGTTTACTTCCTCGGCAAGCTGTTAACCTTGGGCATCAGAACAACGGAAGTCCAAGGATGGAAGCGCCAATCATTGACGACGAACTGTGGATACTGATCGAACCATTGCTGCCACCTGCGAAGCTTCGAGCGAAGAGCGATCCTGGTCGCCCGCGCGTGTCCGACCGTGCGGCTCTCAACGGCATCCTGTTCGTGTTCAAAACGGGAATTCGTTGGAACCACTTGCCGACTCGTCTGGGCTTTGGCTCGGGCGCCACATGCTGGCGGCGATTGAGCGACTGGCAAAAGGCTGGTGTATGGGACCAACTGCACGAGTTGCTTCTCGACAAGTTGCGTGCGGCCGGCCAAATCGATCTGTCATACGCTGCGGTCGATTCGTCGTCCGTGCGCGCCGTTGGGGCGGGCGAAAAACTGGCCCGAACCCCACCGATCGCGCGCGACCCGGTTCCAAGCACCACGTCCTCGTAGACGCCA # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGTGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //