Array 1 4277-5750 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRGD010000003.1 Prevotella copri strain HDC01 HDC01_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 4277 36 100.0 28 .................................... TGGCAAGAGACTGGAAGCTGAGCATCAA 4341 36 100.0 30 .................................... TTTTTATTTCTTCGGCTGTGGTTATATTTC 4407 36 100.0 30 .................................... AAAAGGCTACGTGGTACCAGCTATTCTTTT 4473 36 100.0 32 .................................... CCTTTGTTTTTGCCTCGTGGTCGTTGCATTAT 4541 36 100.0 28 .................................... AACTCAACCCGCTAGGCTTCTATACCAT 4605 36 100.0 30 .................................... CTTTGAGTGAAGTCCCTTGTGCTGCTTGAT 4671 36 100.0 30 .................................... CTGTTTAACCAAAATAGGCACGTTCCCGTC 4737 36 100.0 30 .................................... CGAAAAAGTGCAAAACTTTATTCTAACATA 4803 36 100.0 29 .................................... CAGCGTTATTCTCCTGCTGGTCAAGATTT 4868 36 100.0 29 .................................... CCCCACCAGCCTACTGTGGCATTCTTCCA 4933 36 100.0 30 .................................... AGGTCTTCGTATCTCGGACATCAGGAAGCT 4999 36 100.0 30 .................................... CCTTGTTACTACTAGTTTCTTTATTGATGG 5065 36 100.0 27 .................................... CCCTTCTCAAAAACACAATATTTCGCC 5128 36 100.0 28 .................................... CGCACGATGTGGTAGATCAGCTTCGCTA 5192 36 100.0 29 .................................... AAAGATGTGCCACCGATGGATCCGCAGAT 5257 36 100.0 29 .................................... GTTTATACTTTGTTTCTGTTTTACGTTTG 5322 36 100.0 29 .................................... AGCAGAATAAGCAATACGCAATTGAACCC 5387 36 100.0 29 .................................... TTCTTAAAATATTTAACACAATACAGACA 5452 36 100.0 28 .................................... CCTCACCTTTTAACCTAGAACCATAACC 5516 36 100.0 28 .................................... ATAGTTCATTCTCGGGTTGCTCAACATT 5580 36 100.0 31 .................................... TCCTTGCGAAGCTCTGAGAGTACATTTGCTG 5647 36 100.0 32 .................................... CCTCCTGAAGAGAAGAATTATAAACTTGTTGA 5715 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 23 36 100.0 29 ATCTACAATAGTAGAAATTATTGAAGCATACTAGCC # Left flank : ATGAGACTCTTGATTAGCCCCACCTTATCCAATCGCTTTCTCATTTCAGACGGCGATATACCCATTTTTTGTGCCGAAGCCTCGATAGCCAACACCGTAAAGGCGAGGCGGTCAAACTCTGGGTCACTTTTCAGCAACAGTTCTCTATCTTCCATTCTTTACAAAATATTGTATTTAAATGCAAATTTAAAGATTTTCTCTGATATTCCACTCAATTTCGGAGTTAAATAAAGAAAAATAGACTGATTTTGCCAAAATCTTTGCTGGTGATGGAAGAAGAATCATAAAAGTAGGAGTAAACTTCTCTCTAGAGGCAGAAGAATCTTGGTGAGTTGGAAGGTAGAATAAGCCGTTCCCCTTCTCCTAAGTTTTTACTCTCTAAAACATAGCAAAAGTGGTTGTTCGAAATTTCCGAGCAACCACTTTTTTCTTTACCCCATCTTCAACAAGATGTAACTTCTGCCTTCAGGCTATAAACCAAATCGCACCTTTATGGAATT # Right flank : CTCTTATCGATTGCAAAGATACAAAAAATCCTTTAAATAAAGGCATCTTCTGCATATCTTTTTAAAGAGTATTACCACCCCTTCCCATAATATTGGGTACAATATTTCAAAGAACGCCTTGTAAATAAGCAAGTTACACGCTTTATTACAAAAGCATAAAGACCAAGGTTTGCAAAGTCAAAAATAGACTATAGCTTGGTCCCTATGAATCGCATTACCATACTTAGTAAGCTTATCAGGATCTACATTAAAGAGGATTACACTATCATCTGCTGTGAAATGTTTGGCATAAGCCTCTATCTTCGCAACAAGATTGTCAACAATTCTCTTCGTATTACTAATCTCATAAACAGAATACTGAAGCCGAATGGCACCATTACTTTTCAGCATTTTAGAAAAGTTGGTACGCATCTTGTCATCCGATATGTCATAACTAACAATTATCATTTAAAACTCAAATATTGGATACTCTTTTACAGACTTACAACCCATAAAACAAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTACAATAGTAGAAATTATTGAAGCATACTAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //