Array 1 17253-17045 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIHMA010000034.1 Enterobacter hormaechei strain ECL-14-60 NODE_34_length_38491_cov_139.030406, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 17252 28 96.4 32 ............A............... TTCAAGTCTTCCACAACAACCATGCGTTACAT 17192 28 100.0 32 ............................ ATGTTTTACATTGCGAGCGATGATGCTTTGTA 17132 28 96.4 32 ........T................... TGACCGATGTAAGGAACTGCCGGGACCTGACT 17072 28 92.9 0 ....G.......A............... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 96.4 32 GTGCACTGCCGTTCAGGCAGCTTAGAAA # Left flank : AAACGCGCCACACGTTCGCTTTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATCCCCATAACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTAAGATATTCAATCAACCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCAAAGTGTGTTATCAGCTGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCAGGGTGATGTCATTTGTCATGGTTAAGTATAGTTATTTGTCATGAGATAGGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGTATTTGATCCTAATTTTGGGAAGGAATGTAATGTATTGATTTTTCGGTTAAATATCCTGGGGCGCAAAAAAGGGTTTGAGCAGGGATTTTAACTTTTTTTGTATGAAAATCATGATGTTGAGAAGGTACTATTTC # Right flank : TCATCAAGTGTGAGGCTGTGTGATTTTATTGTGTGCACCACCGTACAACCAACACAAAAGCCGAAACTAAACCCAACCAACCGTTCAAATAATCGACTGTCCTGACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCG # Questionable array : NO Score: 3.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTTCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 28159-27110 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIHMA010000034.1 Enterobacter hormaechei strain ECL-14-60 NODE_34_length_38491_cov_139.030406, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 28158 28 100.0 32 ............................ GAAATTGTTGTTGGCAAGCTGGCACGGCGTAT 28098 28 100.0 32 ............................ GTTTGCGTTTACCGCGCTCGACGATTTAAGCA 28038 28 100.0 32 ............................ GTACCGGCCAACAACGACGGGTATGCCGAACT 27978 28 100.0 32 ............................ ATCCCCTGGGCCACATCATTACGCCCGTCATA 27918 28 100.0 32 ............................ TGAGGGTGACTGGACTTCGTAACCGTCGTAAA 27858 28 100.0 32 ............................ AGCTACCGGCAAGGTTATTTGAACCATCCGTA 27798 28 100.0 32 ............................ TTCCGGTAGAGAAGGTCTTCGTTTAAGTCTGT 27738 28 100.0 32 ............................ GCAACGAGATTAAAAAGATGAGCGGCCAATGA 27678 28 100.0 32 ............................ TGCATGTCGAGCTTCATCGAGTCGGGAATGGC 27618 28 96.4 32 ............C............... TGCAAATTCTGGCGGCCGAGGCTGTCATTGAC 27558 28 100.0 32 ............................ CATCACACGGGCTTTGTGCCACTCGCCGCGCG 27498 28 100.0 32 ............................ GGCGGGCGCGGTTCAGTGCCGGTGCCGCCAGC 27438 28 100.0 32 ............................ ACATTCTCAAGATGCGGCTGCGGGTATGTGCG 27378 28 100.0 32 ............................ GTGAGTCGATGGTCGCAATAGCGGTTGAGGAT 27318 28 100.0 33 ............................ CTGTTCAAACGCTTCCTCGTCGTATTCGCACGA 27257 28 100.0 32 ............................ AGCCGGCGAAACTCCCGCAGGGGGATCAGTTC 27197 28 100.0 32 ............................ GTGAAATGGACGTATGGTGTCTGACGGTAGTT 27137 28 75.0 0 ......C..............AC.CCCC | ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTTTCGCAAACGCAGCCCATTTGCCGTTGTCTCGGTGCTTATCTGGACGTAGTTAAAACCGAACTCGCAGAATCAATGTGTGACTTTCAGGTGGTTGAATTTGACGATGAGGCGGAACGGCCGAAAGGAAAAGAATGGCTTCTGGAAGATACCGAAACCAAGTGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACCGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAACCTGCAATTCATATCATTAATTGACAGTGGTGTAGCGCGTCGGGGGAGGGACTCCGGCGCGGCATGGCGAAACCCTTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTGTGCTAATAAAGGCCGCAGAAAAAGGGTTTCAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTGTTTCA # Right flank : CAAACATTCATCCCAGCTATTTAAAAACCATAATCATCACCACAATCCTCGTTGTATTTTAAATAAACAAAATATTCATTCACCCGACAACCATATTTTCTCATATATATTATTCATAAAAATAATACATTAAATACGGCAGAGTTTTTTCATTTCGACATTACGGTATTTATTATTCATTTGATACACGTCACATTTGTCTTCGTCTTATCTCCGATAACATACCCCGCATTCAACACATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCGTCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTCAATGGGGGCCGTGTTGAATATGTCACTCAGGAAGGTAAGGCGTCGTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTCATGTTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAATTTGCGCGAGCGGG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5126-4738 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIHMA010000009.1 Enterobacter hormaechei strain ECL-14-60 NODE_9_length_173739_cov_140.837938, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5125 28 100.0 32 ............................ CTAAAAGTGAGTATTTGACCCAACATTACAGA 5065 28 100.0 32 ............................ TTTGCCTCCAGCTACTGCCATCGATAGAGTCA 5005 28 100.0 32 ............................ AGCAAAGACATTTAAGCCCCCACGCGCGATTT 4945 28 100.0 32 ............................ CGCATCGAGAAGAAGTAAACGCGCCAACGGAG 4885 28 96.4 32 ............A............... TGATCAATGCCTCGGAAATTGAACCCCTGAAT 4825 28 96.4 32 ............A............... AATCGACGACATCCCACGCGAAGAAATGCTGA 4765 28 71.4 0 ............A.......TAGGCTC. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 94.9 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CAGCTTGCTCAAGGGTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCATCTCCTTTATGTGATATCGCTTACAAGCTTAGAAGAAAGTGACTGTATTGCCTGCTCTATACCCCTCAATTAAAAGTGGTTTTCCTGCGCTATTATTCAGCATGATCTGGTCATCGACTGGATGAAAACAGATATTATTTCAACGGGTTATGTGTTTTTTGAACGCTATTAATGAAAAGCTATAGCACGACGATTTTGGCAAACTCTTTTTACCCCTTGCCTTCGGCGGGCTGATGCTGGCGTTTTCAGGGGCAGGGCGGTTTGCGCGGGGAAAGGCCCGGCGTGGAAGTGAATGTTGGATGCTGGAATGCAGGAAGGGCGCCGCGGACCCTTTTTTATTGGTGGATTTTATTGTGCTGAATGGTAAGTGGTAAAAAAGGGTTTTTGAGAGATTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCTG # Right flank : ACGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCGAAAGGCAACTGAGCTGGCCTGCACGGGCAAAAAAAGCCCGGTAGCGTTAACGCTTACCGGGCCTGCGGGTGAACAGCGACAGTTTATGCCAGAACAAGATCGCCCTGTGGATGGCATGAACACGCCAGCACATAACCCTCTGCAATTTCGGCGTCGGTCAGCGTCATGGTGCTGGTGACTGTATATTCACCGGAAACCACTTTGGTCTTACAGCAACCGCACACCCCGGCACGACAGGCCGCCACCACCGGTACGTTGTTGCTTTCCAGCGCTTCAAGCAGCGTGGTGCCCACGCGGCCAAAGAAGGTCTGCGCCGGTTGCAGCTTCGTGAACTTCATCCCGCTGGTCGCCGCTTCCGAGACCGGCGTGAAGAACTGCTCTTTGAAAAAGCGCGTCACGCCGAGCGCTTTCACTTCTTTCTC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //