Array 1 192097-190030 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMNV010000021.1 Serratia marcescens isolate MGYG-HGUT-02518, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 192096 28 100.0 32 ............................ AAAAAGTGGAAAGGCGTTGGTTATGACTTCGA 192036 28 100.0 32 ............................ CTGAGAAATCTGCAGCGATGATGTACCACCTC 191976 28 100.0 32 ............................ AATGCGCGATGACGCTTGACCAGCTCCGCTAT 191916 28 100.0 32 ............................ ACGGTATTGGAGCATAACCATGGACAACATCG 191856 28 100.0 32 ............................ AGTTTGGGATTCTGTTGAACTATGGAATACCT 191796 28 100.0 32 ............................ AGACCGCAACGCGTTTCATTGAGTACGGGTTG 191736 28 100.0 32 ............................ TTGTCGCACAGGAAGCGGCCCCAAGAAGGCTC 191676 28 100.0 32 ............................ TCACTGGTATGGAGTTCAGCAAAGCGCTCTAC 191616 28 100.0 32 ............................ GATTAACGACGGCATTGGGCGCCGCTCTGCTG 191556 28 100.0 32 ............................ TTATGGGTTGAGTGCCTCCGCCACGGTACCTT 191496 28 100.0 32 ............................ ATCATCAGCGAAGGGAAAGCAACGCTGAAAGA 191436 28 100.0 32 ............................ AAAACGTTGACGGGTTTCTTGCAGCCATCATC 191376 28 100.0 32 ............................ AGCTGGATAGCGAACTGCTGTGATACCGGCGT 191316 28 100.0 32 ............................ TCCAATAAAAAAACCCGCCACTGGGGCGGGTT 191256 28 100.0 32 ............................ GTTGATGCGGCGCTCGCATTCGACTTTGCCAC 191196 28 100.0 32 ............................ AAAACGCTCTAAATTCGACGCCGGCGCCGTTG 191136 28 100.0 32 ............................ ACAGGCGATCGAAATCCTTGTTTACGGTATCC 191076 28 100.0 32 ............................ AACCATGCGGCACGTGCTTCGGGATACTTCTT 191016 28 100.0 32 ............................ ATTCGCGAAGCCAAGCAGGCGTTAGACCTGTT 190956 28 100.0 32 ............................ TGGAGTGGTCGGTGGTCTTGCCCTGGCGTATG 190896 28 100.0 32 ............................ GCTGAAGGCGATGCAACTGGAGAATACGCTCA 190836 28 100.0 32 ............................ ACGAAATCCTGCCAGAAGCGAAATCGGTCAGA 190776 28 96.4 32 ............G............... GTGGAGGAATACGCTGAATTATTGTTCGTTCA 190716 28 100.0 32 ............................ CGTTCGTGTGGCTGGGGTCGATGGACAACGAC 190656 28 100.0 32 ............................ GACGTCGATCAGGGATGCAGACAATAGCGCTC 190596 28 100.0 32 ............................ AAAACGCCCGGCTCATTGCCCCACAGACGCGG 190536 28 100.0 32 ............................ ATGGGAGGATGGCTGGCCCGTCGGCAAGTGGA 190476 28 100.0 32 ............................ AACTGCAATACGCTGCGCATCAACTATTACGA 190416 28 100.0 32 ............................ AATAAAGAATTGAAGGCTCTGCGCCAGATTTT 190356 28 96.4 32 ...................A........ TCGCTGTAGCGGTGCGGACGCACGCTGTCTGG 190296 28 100.0 32 ............................ TTCGCCATCGAGTATGTGAACAAACCAGCCGA 190236 28 100.0 32 ............................ TGGGCGCGTTTCTGGAACGTATAGAACCCGGT 190176 28 100.0 32 ............................ ACTTTGGGCGCCGCACTCATGGCAAAACACAG 190116 28 100.0 32 ............................ TTCGGCGGCCGGCCGCGAGCGTCTAGCCATCA 190056 27 78.6 0 A.G..........C......T..-...T | ========== ====== ====== ====== ============================ ================================ ================== 35 28 99.2 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : AGCCTTGACGGTGCTGGGGGAATTCGACTGGCTTAAAGGATTGAGGGATTATACAGACCTATCATCCATCCTGGCTGTACCTGCTGAGACGGCGCATCGTACTCTTAGCAGAGTACAGGTAAAGAGTAGCGTTGAGCGTATACGCCGCCGGGCCGTCAGTAAAGGCTGGCTGACGGAAGAACAGGCGCGGGAAAGAATACCGATGGCGAACGAGCAACGAACCTCGTTGCCTTTTATCGCTTTGAAAAGCCTCTCCACCGGGCAACATTTCCGTTTGTTCCTGAAACAGGGCAAGTTGCAGGAAATGCCAACGCCAGGCATTTTTAGTTTTTATGGGTTGAGTGCCTCCGCCACGGTACCTTGGTTTTAACCCTTTTTTTTCGTTCAGAGGTAACATATTGATTTTGTTATCTCTGAACGGTATCTAAAAAATTAGGGATAAACCGAGGTATTTACCTGTTGTTCTTTAATAATCAGATTGTTAGTAATTTTTTTGTTCT # Right flank : AGTAGGGATAAAACTTTACCGGTACGTGTTAACCGGGAAGCAAATACTCAAGCGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCCAACGTCAGCTCCCCTTTGCCGCGCAGCGCCTTGGCGCCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATAAAGCATGCCGCTCGGTAAACGCAGCATATAGAGGTGCCAGGGAGTGGGGGTAGTGTCGGTCATCGTACGCCGTTTCGGTGGCCAGGGTCGGCGTATGATGGCATGTTCGCCGTCACAATCCCATCCCCGGCCGCCGGAGCCTTACCGCTTTACCCCTTTTTTCCCGCCAGCTCGAAGCGCGGCGAGACGATGCCGTACAGCGTCCAGCCGAGGAAGGTGGCGATGGCGCCCCACATCATCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 202404-200573 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMNV010000021.1 Serratia marcescens isolate MGYG-HGUT-02518, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 202403 28 100.0 32 ............................ GTATGCCGAGCAAATCATGAGTACCGAAGTGA 202343 28 100.0 32 ............................ TTCCACGGTAACTGGAAGTGCGGCCCGTCTTT 202283 28 100.0 32 ............................ ACCAGCTCATTGAGCGGAAGCTTCACGGCAAT 202223 28 100.0 32 ............................ TTTGGCGCGCCATACGTACCGATCAACCTGTC 202163 28 100.0 32 ............................ TGCAAATCGTACGGCATCGGGAATGTTACTTC 202103 28 100.0 32 ............................ ATATCCAGCTGAGACTTACTCACGCCGTCGCC 202043 28 100.0 32 ............................ ATTTCGCGGAAGTCTATTCCATTAACTACAGT 201983 28 100.0 32 ............................ TGCATCTCTCGATATTTCTACGGTGTCGCTAT 201923 28 96.4 32 .....................A...... AACATGCCTGGGTACAACACCTGTGCCTGTTT 201863 28 100.0 32 ............................ AATCCGGCGTGACAATTGGCGTTGGTATTGAC 201803 28 100.0 32 ............................ TTTATCAAACTACCAGTAAGCCAGCAGAGGAG 201743 28 100.0 32 ............................ GACCTGCTTCGCTTTGACCTGCAGTGGACTGA 201683 28 100.0 32 ............................ GTTACGGGCGTATAAGTTTGGTGGCAGGTCGC 201623 28 100.0 32 ............................ TGCTATTCACTCCAATGTTCACGGCAGATAAC 201563 28 100.0 32 ............................ ACCCAGCGCAAAGATCAGCACCTGCTCACCGA 201503 28 100.0 32 ............................ CCGCTCGCCGGGGCTCTTTTTTTCACATCAGT 201443 28 100.0 32 ............................ ATGACCAGCCGCCAGGTGCCGGTCAGCCAGCA 201383 28 100.0 32 ............................ TATCAGCAGATAGCGCCGCCCAATCTGCTGAT 201323 28 100.0 33 ............................ TAAATTTTCCAGCCCGGCCGCAGACTACGTTGA 201262 28 100.0 32 ............................ AGATGCGGTTGAAATCTTCAACGATTCTGCTG 201202 28 100.0 32 ............................ AGCCACTGACGCAGCACTTGCAGTTATCCAGG 201142 28 100.0 32 ............................ ACAATGCTAACACAATCGTTGTAGACGGTATG 201082 28 92.9 32 ..T..........T.............. AATGGGGGCCGGAAGTGCCTGAGCATCGGCAA 201022 28 92.9 32 ..T..........T.............. TTGGCCAGCGGTGACGCGTCAAACAACTCGGA 200962 28 92.9 32 ..T..........T.............. AATACCGCCGTCATTCAGTGCCCTGTGGAATG 200902 28 96.4 32 ..T......................... AATGTCGCCATCAGTCAGCGCTCGGTGAAAAT 200842 28 100.0 32 ............................ AGCAGCACACACCGGCGGCAGGTCAATGACGA 200782 28 100.0 32 ............................ TCCAGCGCCTGGAGCGTCGCCAGCGTCAGCAC 200722 28 100.0 32 ............................ ATCAAAATCAGCCATATCGACCAGACGCAGGA 200662 28 100.0 32 ............................ TTAAGGTGATACGGAGGTGGTTTCGGGGCTGT 200602 27 82.1 0 .....T.-.........A.AA....... | G,A,A [200576,200580,200582] ========== ====== ====== ====== ============================ ================================= ================== 31 28 98.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCGGCCTACTACGGCCGCTTCGGCTTTAAACCGGCCGCCGCCTATGGCTTGAACTGCCGCTGGCCGGGCACGGAAAGCGCGTTCCAGGTGTATCCGCTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCGGCGCCGTTTAATCGCTTTTAACCACCGGCAACAAATCCTCCAATGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGAGTTGGCAGTTCAGCTCTTCTGTGGTGTCTATGCGTCTGAGTGAAGCGGATGGTGACACCAAACAGGGAACTCAATAATCGCCCCTAAAAATGCAGCAATGCCTTTTTACTCAGTTCTTGGTTGCCGAACCCTTTTTTGAGTGATTTACATAATTTATTGATTTTATGTGATGTTTTTAGACGCTTTGAAAAAGGGTTTTTTAAAAGATATACCGATTTTCTTCCAACAATCAGATGATTAGCGCTAAGATTCAACG # Right flank : AAGTAATACCTACTGAGCATATTTCGGGAACGATCAATAAATGGATGATTTTATTTTTCTGATTGATGGATATTGACTCGGTTGCAACGGATTTCCCTGGAAAAACGTGGTAGAACGTTGGTACCGTTGGCATTGACATGCATTGCTTGTTATTTATTTTAATTGTAATTATTTCATTATGGATAAGAAATATAACAATGAAAAATACCCTTTCCCCCTCTGAGTTAAAAACAATACTGCACTCGAAACGAGCAAATTTGTATTACCTGCAATATTGTCGCGTTCTAGTGAATGGCGGCCGCGTCGAATATGTCACGGATGAAGGAAAACAGTCCCTGTACTGGAATATCCCCATTGCCAACACCACTGCCATCATGTTGGGAACCGGAACCTCGGTCACGCAGGCTGCAATGCGCGAATTTGCTCGCGCAGGTGTGTTGGTCGGGTTCTGCGGTGGTGGCGGCACGCCTTTATTTTCCGCCAATGAAGTGGAAGTCGCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //