Array 1 294445-293624 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHSI01000001.1 Vibrio sp. A11 NODE_1_length_570882_cov_53.956699, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 294444 28 100.0 33 ............................ TGGGTTCAGGTTAGTAAATAACGAGTTAATTTT 294383 28 100.0 33 ............................ TCCACGTATCGCGCACTTGCAAAGCTTTAAGCA 294322 28 100.0 33 ............................ TCGGCTTATCATTAAAAGCTTGCGGTATTGATT 294261 28 100.0 33 ............................ TAACAATACATCCGGTCAGGTCGGGATTGACGG 294200 28 100.0 33 ............................ CACGGCCAAGTGTATGACCAAGTATAAAAGTGA 294139 28 96.4 33 ....................T....... CGTTACACCAAACCGAGCAACCATTTCATCCGC 294078 28 100.0 33 ............................ TACTTTACGGCGGGAGAAACTCCACCAAGTCTT 294017 28 100.0 33 ............................ CAGAGAGTGATATCCGCTCCTCGATTGGCACAA 293956 28 100.0 33 ............................ TCAATACAGACCAACGTCTGCGTGGGAAAAAGG 293895 28 100.0 33 ............................ TTTGACTGTGCCAGTTTGCGTCCACCATTTTTC 293834 28 100.0 33 ............................ CCAAATATCGCTAGTGCTCGAGTCGATGGCTGA 293773 28 100.0 33 ............................ TATTTATACGTCAAAGCGGCAGCGGGTGAGCTT 293712 28 100.0 33 ............................ TACTGGCCAGAAAACCGCTGATAAACAGCTTTA 293651 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.7 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : CTTTACAAAGAACACCTTTGTATTGATTTAGCTTTCTCGCTTACCCGAGATATGGCAGGCCACTATGACAAACATAAGGTCTCTGATGCGTTTCGAAAACGCGTTATCAGCATGAATCTGTTACAGCAAGTCTCCTCGGATATCAATGAGTTGATGGGAGGGGGAAATGCTCGTCGTACTAGCAAATGATTTGCCCCCAGCAGTTAGAGGGCGTATGAAGCTATGGTTTGTTGAACCAAGAGCCAATGTGTTTGTTTCTGGCGTAAAAGATTCAGTTGCACTGACGGTCGTTGACTATTTAATGCAGCATTGCCCTGTGGAATCTGGCTTAATGTTATTTCGCAGTATTCCAGAACCACCCGGTTATGAGATTCGCTACAAAGGTGAAGTGCGCAAACCCGTGATTCAGATTTCTGGATTACAATTGATAGTCGAAACCCTTATTTCGTCAAAATAGCAATATATGGGTTTATTTTTGCGATCTTTAACAATATATTGGT # Right flank : CTTTCTTCGGCGTTCCTACTTACTTTTATCGCTGTCTTCTGTCACCGATTATGCAAAACTGATCCACTTAATACTCTCAGTCCGCATGGATTCCCGCCTGCGCGGGGATGACGGTTTGGCTATTGTATGGGTGGTCAATTCGATACTCATCTTGCCAGGCTGTGCCTGTCATAGCTCTTCGTTAATCGGGGCAATACAATATTTTGCGCAGATTCGACAAGAAAATGTGAGTAAAGTAACAATATGCGTCTTTCATTCATTAGACACTATTAACCATAAACTTTGTGATTGGTTGAATCTATGAAAACGTTAACTTTACCTTGTCAGCGAGACGTTGAAATAAACGCCGCAGAGCTAAACGTCACCCTTAAAGGTCATGAGCTGCATTTTTCTTATCAAGGTGACCCATCAAAACCGATCAATGATCGTTTTATTCTTGCTCGTAGTTTACTCGAAATGGATGCTAATGCGCTTGTTGTTGGCGATGGCTTTCAAATGCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2327-2534 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHSI01000037.1 Vibrio sp. A11 NODE_37_length_4441_cov_77.304126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2327 28 100.0 32 ............................ ACCTTATTCAAAGTATTCGTCTGCCGCTGGTG 2387 28 100.0 32 ............................ TGTTGGCACTCGATAACGATCTGACCTTAGAT 2447 28 100.0 32 ............................ CATTGGTGCCATTACTAGTGTCTGTCTGATTC 2507 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGTCCGGCTCTGCTCTGATAAATTGTGTGCGTAAAAGGTTCGATTGTTGCTGAAAGGTCTCTTTCTTTGGTGTTGCTGGTTCATTGATTCCACAGGCTATTTCGCTTCAACTTATTTGGGATCTTATCGGCACCAATGATTGCTGAAAGTAGGCAAGTTTATCATTTTGAGTTAAAGTGCTGCGAACAAATGAGTTTTTTAAAAGTTCAATGTAATCAATGAGTAATAAAGCATAACAAACGCTTCAAGAGGGACTTCCAACGCGCGGCATTTTTATTATGCGTTGGTTTTTGTGGTTACGGTGTTATGCGGAAACTTGATAGTAGCGTTGTCAGCCCCTTAAGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATAAAGTTTCATA # Right flank : ATATTGGTACTTTTGGCATTTGGGACCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGCGGCATTTTCGTTATGCATTGATTTTATTAGTTTTTAGTGCAATGTGGTAAGTTAGTCGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGTGCTTTCGGAGAAAATAATGAAAAAGTGTCTATTAATTATCCTTGCTTGTTTTTCATCTGCTGTGATTGCTGGAAACGGACCTCTTGATTGTGATAATGCGATGAATACGCTTGAGATTAATCAGTGTGCGAGCATGGCTTTAGAATCAGCTGAAGTGGAGTTGGCAAAGTATCTTGCAGCAAGCTTTGAGCATAATTCGGCTGATGTTGAGTTGATAGCTGCAATTAAATTAGCTCAAGGCGATTGGCAGGCTTATATGTCTTCTCATTGTAATTCGGTATACACCCAATGGCGCAATGGTACAATTCGAGGTGTTATGGCGATATCTTGCAAAACTCGGTT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1910-1642 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHSI01000041.1 Vibrio sp. A11 NODE_41_length_2961_cov_84.025053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1909 28 100.0 32 ............................ TGTATGACTCGTAAGGCGGGCAAGTAAGCAAG 1849 28 100.0 32 ............................ ATCAATGCATCAAAAATTAATTAATAGTTTGG 1789 28 100.0 32 ............................ AGCAACCCAAGCCGATAAGTGACTTGCAGACT 1729 28 100.0 32 ............................ TGCAGTAACATCATCCGCGACAAACTCGATCC 1669 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 99.3 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTCCGGCACTGCTCTGATAAATTTTGTTCGTAAAAGGCTCAATTGTCGCTGAAAGGTCTCTTCTTTTGGTGTTGTTGACCCCTTGATTCCTCAGGCTAATTCGCTTCAACTTGTTTGGGATCTTATCGGCAACAATGCTTGCTGAAAGTAGGCAAGTTTATCATTTTGAGTTAGAGTGCTGCGAACAAATGAATTTTTTAAAAGTTCAATGTAATCAATAAGTAATAAAGCATAACAAACGCTTCAAGAGGGACTTCCAACGCGCGGCATTTTTATCATGCGTTGATTTTAGTGGTTTCAGTGTTATGCGGAAGCTTGGTAGTAGCGTTGTCAGCCCCTTAAGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGGATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATAAAGTTTCATA # Right flank : AATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCATTGATTTTATTAGTTTTTAGTGCAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATGTTGCCCCTATAAATTTTGTTATCATAGAGTGAAAAATGATAAGAAAATACAACGATAATGACTTAGATTCGATTATTGAAATCTGGTTGACGGCTTCGATGAAAGCTCACGATTTTGTCTCAGCTGAATTTTGGAAATCCCAAGTTGATAATATGCGTAATATCTACCTTCCAGCTTCAGAGATATACGTCTATGAAATAGATTCTAAAGTTGTTGGTTTTTACGCATTGTATGAAAGTAATCTGGCAGCGATATTTGTAGAGTCTGATTTACAAGGTAAAGGTATTGGTAAGCAATTGCTGAACCATGCAAAATCGCAAAGGGTTACGCTTACTCTTTCTGTG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 48348-45427 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHSI01000003.1 Vibrio sp. A11 NODE_3_length_277143_cov_55.771789, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 48347 32 100.0 34 ................................ TGTGTTCGCTTGCAGTTGTTCAACTTTCTCAGAA 48281 32 100.0 34 ................................ ATTGTCAATTCTAACTGAGACGCCATTAACAGAT 48215 32 100.0 34 ................................ AAAAATAGCAAAAGGCAAGACGACGACTAATGAA 48149 32 100.0 33 ................................ ACATTGACCTAGGACTATCCGCCCTTTTTTTTG 48084 32 100.0 34 ................................ CTTACTATCTAGTCCTGATAGCGCCAATGCCTGA 48018 32 100.0 33 ................................ GATTAATAATCCAACCAAGTTACCATATGCCAC 47953 32 100.0 33 ................................ GAAGTAACGTAATCAGCATATCCGGTCAAGTTT 47888 32 100.0 34 ................................ TAGTTGTATTCTATTCGATAATGATTTCGTACAC 47822 32 100.0 33 ................................ CATCATACGCCATGCGTTTGTGCGTTTTGCCCA 47757 32 100.0 33 ................................ TGTGTTGACTGAACCCTGACAAGAATTCTCTTT 47692 32 100.0 33 ................................ TCGTATAGCCGTTAACCGTCTTTCCGTCAAAGC 47627 32 100.0 35 ................................ TTTGGTCGGTGGATATTTAGCGTGCATAGCCATTG 47560 32 100.0 34 ................................ AATACCTAACTATACATTTTCCTTTATACCCTTT 47494 32 100.0 34 ................................ GGGCAAAGTGGCCGTTGCTATTTTGAGCCGAGAG 47428 32 100.0 35 ................................ TTTTTTCTGCAGTTCAATGTGAGTGTGAATATAAG 47361 32 100.0 33 ................................ ACAGAGCGATATACAATATTATCGATCCGCTTT 47296 32 100.0 33 ................................ ATGATGACAAAGCGCAGCTTCACAAGTGGCGGC 47231 32 100.0 34 ................................ AACATCGAATGGGGTTTTATTTTATTTTGATAAT 47165 32 100.0 35 ................................ AGTGTTCATGGTGGTATTTGCACCAATCACAGCAG 47098 32 100.0 33 ................................ CGGTAGTTGTATCGTAAACCACTCGGTTTTTCA 47033 32 100.0 34 ................................ CAACACTGTATAACGAATCGCGATGTGGTTTACG 46967 32 100.0 34 ................................ AGAAAATGTGAAGAAAACATTAAAGAGTTCGGAT 46901 32 100.0 34 ................................ CAGAAGATACCGTTTTCGACAACGATAACCAGAA 46835 32 100.0 34 ................................ TATTGTAACGCTATTGTTAGCTAAGCTGTAGCTT 46769 32 100.0 33 ................................ TGTAAGTCGGAAAGCGCTCTTGGTATTTGTCAG 46704 32 100.0 35 ................................ TCTTGTGTAAACGCAAACAGCATCAAATCGCTTAG 46637 32 100.0 33 ................................ GCAGAACGTGAAGACGACTGGCCGCTAGCGTAG 46572 32 100.0 34 ................................ CAGTCAGTTTGGTAAGTGATCGGCCAATTGGCTT 46506 32 100.0 33 ................................ TGAGTAATCGAAGAATCAAACCCGCTTGACCTT 46441 32 100.0 33 ................................ TTCTTTTGAATACTGAGCGGCCATATCGTTAAT 46376 32 100.0 33 ................................ GCAGAACGTGAAGACGACTGGCCGCTAGCGTAG 46311 32 100.0 33 ................................ ACGCTTAAAGACAGCATGGCTATTAGCAAAGTC 46246 32 100.0 33 ................................ GTCTTAATTTGGGTTTCTCTGCCCAAAATCCAA 46181 32 100.0 34 ................................ GTTGCCCAAGACGGCTATGAAGTGGTCGATGATT 46115 32 100.0 33 ................................ TTGCCTTGTGAGTTATGAGTGATTTTGTAATCA 46050 32 100.0 35 ................................ CATCTGAGACTGCAGCGCGGATGCATCATCGAGAG 45983 32 100.0 34 ................................ GTATATTGGCTGGTGGTCAGATGAATCGTAGAAA 45917 32 100.0 33 ................................ ACGAACGGCAATGTGATAGAGCGTGTTGGCTTT 45852 32 100.0 34 ................................ CATGAACTCCGGTCATTTGCTGAGCGAACATATC 45786 32 100.0 33 ................................ AGATGAGATTGAAATGCTGGTGGATAAGTTTGT 45721 32 100.0 34 ................................ TTATAAATCCGCTTATGCAGTTTGGTTCGAGGTC 45655 32 100.0 34 ................................ TAGCAGTAAAACGAACATCAACGCTAGCATGATG 45589 32 100.0 34 ................................ CCGAGTAAACAAAGCTTCGGGCATGAGGCTGTTT 45523 32 100.0 33 ................................ GATTAAGTATCCACGACAAGTTTGAAGCAGGTC 45458 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 45 32 100.0 34 GTCGCGTCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : ATTTGTGATCAAAAAATAAGGAGAGTGCGCCATGATGGTATTGGTCACCTACGATGTATCTTTTGTCAGTGATGATGGGCAAAAACGCCTCAGGCAATTAGCAAAAGTCTGCTTAGACTATGGTATGAGAGTGCAATATTCAGTGTTTGAATGTGAAATAGACTCAACACAATGGTTAGAATTTAAAGATAAACTTTTATCTATTTATGATCCTGAAGTCGACAGTTTGCGTTTTTATAAGCTCGGTAAAAACTGGCAAAACAAAGTAGAGCACCATGGTGCGAAAGAAGCGATAGATATATTCAGAGATACCCTGATTTTATAATCGCTAGCCTTGAGTTCTCAGTAAAACACTGGGGATCTAGCGATTACATAAGTTCTTTAAAAATAGAGCAAATATTTGTTTTTATAGATTCACACAAAACAGTTTTCTTCTACCGCGTAAAGTTAGCGGCAAACCATAATATATGCTAGTTTACACGTGCCTTTCACAATAGGCA # Right flank : ACCATTACTGATAACTCGTATCTTTCTGACAAAAGTCCCACCTCACAAGAACATAGTGAAACTCGACTCGCTTAGGTCGACAGTTTGCTGTTACGGCAGCAAATTACCGGGCTTCACTTAACGCTCAACCATACTTTCTTTAAGCTGTTGCCTTGTATCCGGTTTTAGATAACTCATCATAATAAAACTGAGTAATCCACACAGTAGGGTCGGGACGATGGGATGGATGCCCGCTAAATCAGGTTTTAACCACATTAAACTCGTGTAGGTGGAAAGCCCAACGATCATTGAACTCAATGCGCCTGTCGATGAAGACTTTTTCCAATATAAACCGAGCACCAAAGGCCAGAGAAATACCGCTTGTAAGCCTCCGAGTGCCATTAAGTTAAGCCAGACAATCATCTCCGGTGGATTGGTTGCAGCAAAAAAAACTAACAAAGCAAAAATCATCGTCACCCACAAAGATAAGCGAGTCATCTTACTTTCTGCCTGCGGCTCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 423-275 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHSI01000080.1 Vibrio sp. A11 NODE_80_length_521_cov_72.532995, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 422 28 100.0 32 ............................ CTAGTAATCCACCGCCTTCCTCGATCGCTGTT 362 28 100.0 32 ............................ GGAGTGCAAAAGACTAATGCGAATGCAAAGAA 302 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 3 28 98.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATAAAGTTTCAT # Right flank : ATATTGGTAATTTTGGCATTTTGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGATTTTATTGGTTTTTAGTGCAATGCGGTGAGTTGGTCGTTGCGTTACTCACCCCTTAACGCGGCGTTAGGTCACAACGGGATCACACGAATAATGTATGAAGATATCGAGTGAGTATGGAATAGCCAATAGGGTATAGAGGAAAGAAGGCAAAAAGGACGAATATTAGTCATTTCCATGATACCCTTG # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //