Array 1 1105-56 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORZL01000025.1 Xanthomonas fragariae strain PD 3145 isolate PD 3145, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1104 28 100.0 32 ............................ TTCGCGGGCTAACGTCGGCATAGCAGCAATGA 1044 28 100.0 32 ............................ AAGGCGTCACGCCCGGAACGCTGATGCCGTTG 984 28 100.0 32 ............................ ACGATGCTGCCGCTGGTGCCGAACACGTAGGC 924 28 100.0 32 ............................ AGGAAGATCGCCAGGAGGACCAGGACGGTGAC 864 28 100.0 32 ............................ GTCCTCATCTACACCACGCATCCCTACATCGT 804 28 100.0 32 ............................ ATGAGCGGCACCGCTCAGATAGGCAATAACAC 744 28 100.0 32 ............................ GTTGCCGGGTTGCCCGGTGTATAGCTCGATTG 684 28 100.0 32 ............................ ATCACGGTCAGTACGGCACCGCCGATCGCTGC 624 28 100.0 32 ............................ ACAAAGCGCGATGCACCGCGCTGGGAATCTCC 564 28 100.0 32 ............................ AATCACGGTGTGGTAGGTGTCGATGTGGGAAA 504 28 100.0 33 ............................ ATGGTCATTGCGATCAACCTGTTTACGTTCTTC 443 28 100.0 32 ............................ GAAGACGGCAGTGTCATGCAGTTGCAGCAGAT 383 28 100.0 32 ............................ CTTGTATTGGGCTGTGTCTACTTGAATTGAAG 323 28 100.0 32 ............................ AGTACCAGGGCAACGTCCAGTGCGCATGCAAT 263 28 100.0 32 ............................ GCTAGCGCACTGACCATCACCAGGGAGACAGG 203 28 100.0 32 ............................ ACCACAATGTTAGAGGTATCGATCCACTGCAC 143 28 100.0 32 ............................ ATTGCGTCATGATCACAGCATCGCCGCCATTC 83 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AAATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //