Array 1 1086550-1087737 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP054224.1 Escherichia coli strain EcPF16 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
   1086550	    29	 100.0	    32	.............................	TGATAAATTGTCCGCCCTGGCGGAATACCTCA	
   1086611	    29	 100.0	    32	.............................	ACGGCTTCATGTTCTTGGTGATGGGGTTCACC	
   1086672	    29	 100.0	    32	.............................	AAAAAATGCGACGACCGCAGCCATTCCGATCT	
   1086733	    29	 100.0	    32	.............................	TCATACGCCTGGTATAGCGATCATCCCGATGA	
   1086794	    29	 100.0	    32	.............................	GCGTTGGAGTTCGCGGCGGCATTATTGAGCCT	
   1086855	    29	 100.0	    32	.............................	AGTCTTTAATCAAAATGGATTTTTATAATGAA	
   1086916	    29	 100.0	    32	.............................	TACTGGAAAAAGCTGGCGACGGTGAGCGCAGC	
   1086977	    29	 100.0	    32	.............................	GGCACAGAATTGTTATGCTGTTCCCCTGACCG	
   1087038	    29	 100.0	    32	.............................	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG	
   1087099	    29	 100.0	    32	.............................	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA	
   1087160	    29	 100.0	    32	.............................	GGACAATGTGAAAAGCTTAATATTCATTACAT	
   1087221	    29	 100.0	    32	.............................	CGACGTTTTCTAATATCACCCAGCAATCAATT	
   1087282	    29	 100.0	    32	.............................	ATTTCATCAAAGCATTAAGGGATGGAATAAAG	
   1087343	    29	 100.0	    32	.............................	TCATGAATATGGGGAAAACGAACAATCTGTTT	
   1087404	    29	 100.0	    32	.............................	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA	
   1087465	    29	 100.0	    32	.............................	CCAGCCGAAACAACGCCAGCAAAATCGACCGC	
   1087526	    29	 100.0	    32	.............................	GGATATAGAGCGGGTACTCGAGCGGAGCGGGG	
   1087587	    29	 100.0	    32	.............................	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC	
   1087648	    29	 100.0	    32	.............................	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA	
   1087709	    29	  93.1	     0	............T.....A..........	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  99.7	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTATCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA
# Right flank :  GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//