Array 1 1129-3145 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQCI01000057.1 Levilactobacillus parabrevis strain LMG 11984 Scaffold57, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1129 36 100.0 30 .................................... GAAGGTGAGTACACGCTTGAAGGTCAAGGC 1195 36 100.0 30 .................................... TTGCCATATTCCGAAAAGTTAGCAGCGGTC 1261 36 100.0 30 .................................... CGGGCTTTCAGCTTCACAATGGTTTTTGCG 1327 36 100.0 30 .................................... AAAGGTAGTGGATTATCTGACTATTGATAG 1393 36 100.0 30 .................................... TCTGATGGTAGCGGCAATCTTAAATGATTA 1459 36 100.0 30 .................................... AGCTAAAGTAGCTACCATGAAGGGTGATAA 1525 36 100.0 30 .................................... GAGAGAGCTATTGAGTATGATGGAACGGTC 1591 36 100.0 30 .................................... GAATGATTATGCCCGGGCGCTTCACATCCC 1657 36 100.0 30 .................................... AGCCTTTGACGTTTTCAAGCAGTAAATAAG 1723 36 100.0 30 .................................... GGAGGTGCCATTCGATGCCGCTGAATGATA 1789 36 100.0 30 .................................... AGGCATATAATGACGACTACGATAAGAGAA 1855 36 100.0 30 .................................... GACAGTCTGTGGAAGTTAGACCTGGAGACC 1921 36 100.0 30 .................................... ATAAGGCCCGTAGCTGTACGGCTGCTGGCG 1987 36 100.0 30 .................................... TCTCTAATTCGTTGGTCGTAGTTTACTGTC 2053 36 100.0 30 .................................... CGGTATATTGTCGGGCATCCTGCTTGGATT 2119 36 100.0 30 .................................... ACGAACAGACTAAAGCACCGGGGTAAATTG 2185 36 100.0 30 .................................... GCTGATGGCGTGAACATGCACTACTGCAAA 2251 36 100.0 30 .................................... AAGATTGACACGGCCTACCAGCTACAGACG 2317 36 100.0 30 .................................... AAGTGGTACATCACGTGGCAGAGGACTTTA 2383 36 100.0 31 .................................... CACTGTACCAGACACACCTTTACTTCACGAA 2450 36 100.0 30 .................................... TGGATCCTACGCCTTGTGTGATTTTGCCTA 2516 36 100.0 30 .................................... TTTCACGTTTACAGGTCAACGTGGACACTA 2582 36 97.2 30 ......G............................. AAAAAGTTTCGCCAACTTTTCTTTTTCCTC 2648 36 100.0 30 .................................... GCCAGTACCTCATTGCTTACTTGCTCCGCG 2714 36 100.0 30 .................................... CTTCAACCAATCATCTTTGAAGCCCCATTC 2780 36 100.0 30 .................................... GTAATCAAGGTGTGAACGGTCTTACTGCTG 2846 36 100.0 30 .................................... ATGACACTCAATGCATCGATGAATACCGTA 2912 36 100.0 30 .................................... TCGACCGGCCGCGGACTGATTCGTATACTG 2978 36 100.0 30 .................................... GAATCTTAGTTCCTTTTTCAGCTCCGGTCT 3044 36 100.0 30 .................................... ACAATTTGTTTGGCGCAACCGGTCAACAGG 3110 36 80.6 0 .........................G.T.GG.T.TT | ========== ====== ====== ====== ==================================== =============================== ================== 31 36 99.3 30 GTTTTAAGTAGATGGTAAATCAATAAGGTCAAGAGC # Left flank : TCATTGGATTTAAATAAGCTCTTTCAAAAGAAACTGCAGAATCAAATTATGAAGGTTATGACTAATAAGCAAACTGTGGACTTAGCTGATGGCATACGAAAGCTTGTGTCACAATTGCTAGAGAACAGTTATGTCATGGATATTCCGATTGAGTTTCCCGAGATTCCAACAGTAGATAAATTGGTGAAGTTTAGCGGATTACAAGTCATCCCGGAAGTTGAAAATGATGTCTATGTTATACTGGAATCGTTAGTTAAAGTGTTAATTGAACTGAATGATCGCCGAATAATTATCTTGACCAATGTCAGTCATTACCTCAAGGTCAGCCAGATTAATTCTCTGGTAGGTTTAATGGCAGATGCAGATATACCGATGCTTATAATTGAATTCTCACAAATCCAGCGTAATGAATTTTTTGTAAAATGTGATTATCACTATATTGACGGTGATTTTGTCTTGTGGTGATCTTAGGCACATTATATATCGATGTGAAAATGATG # Right flank : TATATTTGAAATAGCTGTAATTTATTTGACATGAAAACCGCCTCATCATAATTTCCTACAGTAAAGGGAAAATTATGGTGAGGTGGTTTTCAACACAGCTATTTTAAAATATACTACCCAGCCGCATAAGGCACGGGTTTACTGTAGTAATATCCCTGAGTCATGCCAACATTGTAGCGTCTAGCTAAATCGACATCGCCCTTGTCCTCAATACCTTCAAGGGTGAAATCGAGGTGGTATGTATCGGCAATGTTGCGCCAGAAGTTGAGACTGGCCATCATTTCTTTTTGCCGGTGCTGGAACCGGAAGTTCTGCATCGCAAATTTAATGCTGTCCATGAAGGGCAAAACGTCCTGAATAGCTTCACACCAGGGATTGTCCGTACCAACGTCGTCTAGGCTCAGCTTGATATCGTAGGCCTGATAAATGGCCACGTAACGGTGAAGTTCCTCCAACGAAGGGGCCTCCGTCAGTTCGACGATTAATTTGAGGTTTTGAAC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAGTAGATGGTAAATCAATAAGGTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //