Array 1 1851568-1850938 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CM002130.1 Streptococcus sp. HSISS3 chromosome, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1851567	    36	 100.0	    30	....................................	TTTTATCACAGGTTTTGTTTCTGCTGGGAA	
   1851501	    36	 100.0	    30	....................................	AGTGGAAATGGGACTTACGATGCTGGTACA	
   1851435	    36	 100.0	    30	....................................	AAATTAACGGAAGACATAGATGCAAGCCTT	
   1851369	    36	 100.0	    30	....................................	ATTAATAGTGATATCGAGTATAGACTAGGT	
   1851303	    36	 100.0	    30	....................................	GTCTGCTATGACGGTCTTTAATGGGCTTGT	
   1851237	    36	 100.0	    30	....................................	TAATGTTTTTGATTCCGTTTAAGACAAATT	
   1851171	    36	 100.0	    30	....................................	CTATCTGTAATCGGTATGTCTTGGACAAGT	
   1851105	    36	 100.0	    30	....................................	TTATACTCTTTCTCAGCTACCTTAATACTA	
   1851039	    36	 100.0	    30	....................................	ATTTAACGCAGAATTGTCAGCGTTCTTGGC	
   1850973	    36	  94.4	     0	.............................T....C.	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	  99.4	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   AGAAAATTTTAGTATTCGTCAATAGCTTGTCGTATTTTTCTAAAGATGAAATTTATCAAATCTTGGAATATATAAAGTTATTACAAGCTGATGTATTATTTTTGGAACCTAGACAGATTAAAGGGATTCAACAATTTATTTTAGACAAGGATTATATTTTGATGCCCTATAATAACTAGTAATTTGGTAATAAGTATAGATAGTCTTGAGTTATTTCAAGACTATCTTTTAGTATTTAGTAGTTTCTGTATGAAGTTGAATGGAATAATTATTTTGTTAGAGAGTAGATTATAAGGCTTTGATAGAGGAGGAGTTAAGTTGCTTTACATATGATTATTAAGAAATAATCCAATATGGTTACAGTCACATCTTGTCTAAAACGTTGATATATAAGGTTTTTTAAGGTATAATAAATATAAAATGGAATCATTTTGAAACTGAAGTCATGCTGAGATGAATAGCGCGATTACGAAATCTGGTAGAGAAAAACGATATACGAG
# Right flank :  CCATTGTAATGATTTTTGGTTGACTTCTCTTCAAACGCATCTTATCATAGAGGAGTATAGTATTGAAATGGGGGAAGAGACATGTTATACGAATATCCAGCGATTTTTCACACGATTGAGGAAGGTTATCAAATTAGTTTTCCTGATTTTGGTCGTAGCATTAGGGCAGATTCTTTACCTCTTGCCATGACAAAAGCGTCTGTGTTCTTATCACATATTATTAAGGGGTATGGAGATAAGGCTTTACCTGAGCCGACTGCGGTAAGTAGCATTCCTAATGAGGAAGAACTCGTCGTGTTAATCCAAACAGAGCTTGATTAAGACTAAAAACTCTCGGAAAATTAATTCCCGAGAGTTTTAGGTTTTATTGGCCACATAGACGCCCAAGACGACTAAAATTCCTGCAAAAATTTGTAAATACGAGAAGGGTTCTCCTAAGACGACGACAGCCGCTAGAATTGAGATAATTGTCGAAATCCCAATAAAGGATGCTGTTCGGT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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