Array 1 163176-163607 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048268.1 Lactobacillus panisapium strain ESL0416 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 163176 36 100.0 30 .................................... AATAAAAAAATATTTTAAAAATAAAGATTC 163242 36 100.0 30 .................................... TAGGCATTACTACTAAGTCTTACGGACAAA 163308 36 100.0 30 .................................... ATACTTGCATACATTAATGCAGGTATGCTA 163374 36 100.0 30 .................................... TCTCGCTGAGGATTGTCTAATGCATAGCTA 163440 36 100.0 30 .................................... CTAAAAAAGCTGGAGATCTGCAACAGACTT 163506 36 100.0 30 .................................... AATGGTACAGCCATTTCTGCACCCGCATCG 163572 36 91.7 0 .......G.........G.................T | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 98.8 30 GTTTTAGATGGTTGTTAAATCAGTGATGACTAGAAC # Left flank : TAAAAACTAATGCAATTCTTTTTGCATAACTGGCAGTAAAAATTGTTTAAGCGGTTAAATTTGGCAAATAAAATTGATTGCGTTGGAACTACTTCATATTTTTATTTGAAAAAGCTTTTGACATGGTAGGAACAGGGTATTAATAGCCTAGATAAAGTCGCACAGAATAAGATATTTTGCGTTTTTAGCAGCATTATTTGATGGCAGATTTGCCGCTAACAATTAGCTTTGATGAAGACTAGAAAAAGCTATTCAAAGGGCTGATTTGTATCTAGCTGAGAATATATTGAGTGATCCATATGCTATAATTGAAACGGTTCTATAGATTTGCCAAAACTGTAACTTGAAAATAATTATTTTGATAATCAGGAATTAGTACTAATTGAATTCACATCTTCGGATTTTTTGGTTGTTCCCGGGGATGCCTATTTTTATAGCGTTAATGAAGGTTTAGTCGACTGATATTAACTGCTGCATTAAAATTTGATGATAAAGCATCT # Right flank : TTAAGAGCAACTGTCAAAAAGTTTTCTTTCAAATTGCCTCTATTATCAAGCTTGAGCATGCTAATTATGGACGTAAATTTTTAGAAAGTGGCGAATTCACACTCTTTAGTAGTAATTCAATGGGGTGTTCAACCCATTACTTGCTTAATTATTTAGTTAATTTTGCTAGTTTTACCCAAAACAAAAGCCCTATTAAATAAAGATTTATTTAATAAGGCTTTTTAATTTTTAAGATTATTGCTTATTAATCAAGTTCTTAGTCCAAAGATGCTAGCTTGTCAGATGATTTGAACCTAGTTGATTTCGATATCACCGCTTTTACTGATTATTTTGAGTAAAGGGGCGCCGTGATAGATTTTCTTATAATGCTTTCGCTGCTCACGACCCTTAACTTCGATATCACTGTCGGAAGTAGTTGATAAATCATAACTGATATTAGTCATCTGATATGATTCAAAATCACCATCGTTTAATTTAAAGGTACTATTTCCAAGGAGTTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAAATCAGTGATGACTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 371419-373632 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048268.1 Lactobacillus panisapium strain ESL0416 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 371419 36 100.0 30 .................................... ATTGTCAAGACTTAACTAATAGTGATAAGC 371485 36 100.0 30 .................................... ACAACACTATCACAAGTGTTAGGAACACCA 371551 36 100.0 30 .................................... TGGGGTTATTTAGCTAAATGGGGCGTATCA 371617 36 100.0 30 .................................... GGCATTGCAAGCGAAGAAGATGATGATGCG 371683 36 100.0 30 .................................... GTGTATTGAACATGTTAGTTGTGTTTCTGA 371749 36 100.0 30 .................................... ATTAAATAAGCATACGTTGCATTAAGTTGT 371815 36 100.0 30 .................................... CAACCTATGATTTCAATGGCCAAAAAATAG 371881 36 100.0 30 .................................... TAATTCTTAAAAATGACTGTGCAACAGTTG 371947 36 100.0 30 .................................... CGATTTCTATATTGATTTAAATCACTTTAG 372013 36 100.0 30 .................................... TCTTCTTCCAGCTCAGCAACAGTTCTTGAC 372079 36 100.0 30 .................................... ATGAGCAATTAGAACCCCAATCATATCGCA 372145 36 100.0 30 .................................... TCATAAAGATGGCTACAAGTTAGTACATAA 372211 36 100.0 30 .................................... ACGAAAAAGCATTTTATCAAGATGAATTAA 372277 36 100.0 30 .................................... AGTTTTGAAGGTATATCCGCAATCATATCG 372343 36 100.0 30 .................................... GTCTGAAGCATATATTATAGCCAACGGGCG 372409 36 100.0 30 .................................... TCATTTTCAATGATATAAACGGTGTTCGGC 372475 36 100.0 30 .................................... AAGCAAAAATGTTTTAACAGTATCAGTCGT 372541 36 100.0 30 .................................... TTACTGTTTTTAGATAACGCATCATAATCT 372607 36 100.0 30 .................................... AAAATACGCAGCAAAGACGTGTTAATTTCA 372673 36 100.0 30 .................................... TGAATTCAACGTCATTAATTGACATCCAGC 372739 36 100.0 30 .................................... CATCCCCCTTCAACCCGTAAATTACGACAT 372805 36 100.0 30 .................................... TGCGTTTTGTCCAGTTGTGCCAAACACGTT 372871 36 100.0 30 .................................... ACGTTTTACCACGTCAACAAATGACAATTA 372937 36 100.0 30 .................................... AAGTGTTATACTTTAGATAGTAAAAGATAA 373003 36 100.0 30 .................................... AATTTTGTTAAGGTTATTCAAAAAGATACA 373069 36 100.0 30 .................................... TTGATAATAAAGATTATGAAAAATTGACCT 373135 36 100.0 30 .................................... TGTATCAAGTAAAACTAATTAACGATAACA 373201 36 100.0 30 .................................... TGCAGCAGTTAATGCTGTTTTAATTCTGTT 373267 36 100.0 30 .................................... TAGATGGAAGCGTGGTCAGCAGAGACTTTT 373333 36 100.0 30 .................................... TAATGTGGTGGTTTCATTTTTATCTGCTCC 373399 36 100.0 30 .................................... GTCTCTCTATCCCTTTTCGACTCTAATAAT 373465 36 97.2 30 .............A...................... GGCGTAAGTCGCACAAGGACAATACTTTTG 373531 36 97.2 30 ....................T............... TTTTACTAAAACAAGAATGATACAATACAG 373597 36 88.9 0 ..............C...........C.......GT | ========== ====== ====== ====== ==================================== ============================== ================== 34 36 99.5 30 GTTTTAGATGGTTGTTAGATCAGTGATGACTAGAAC # Left flank : AGTAGCGATATTACTAAAAAATACTTAACCAAAATTGTTAGTACTTATATTACTAACTTAGACGAAGCCACGCGTAATAAGATAATCTGTGCTTTTAGCAATTTAGAATTAGCATTATCTGATTCACTGCTTCTTGAAGATTTACCGTTAGCAATTAACTTTGAAGAAGATTTAAAAAAGCTACTCAAAATGGCAGATTTGCATCTAGATGAGAACATATTGAACGAACCATATGCTATAATTGAAACAGTTCTAAAAATTCACCAAAACTGTAATTTAAAAACAGTTCCTGTGTTTTGTAATACTACAAATTATTTAGATAATCGGGAATTAGCCGAATTAGCACAGATTGCAAAGCAAATGAAGTTAATGGTCGTTCTAATTGAATTCACATCTTCGGATTTTTTGGTTGTTCCCGAGGATGCGCAATTTTATTACATTGACGAGGATTTAGTCGACTGGTACTAACTACTACATTAAAATTTGATGATAAAACATCG # Right flank : TTAAAAATTCATCTATCAATAAAGTTGGCTTTAGCTTGCCTTTATTGAGCCAGAGCTGTAGGCTTTTTATGACAATTTTGGACGCACAATTTCAGGAAGTAGCGAGTTCACGCCCTCTTTACTGGCAGCAATTTCAGAGATTGTTTGCCCAGAGCTTTACGCGGCCTGCTTGCCTATGTGAATTAACTAATTTTACTCAATAAAAAAAGCACATCGTTTGTGATGTGCTTTTTTAGTGCATTTACATATAACTAGCTGTGAGCTGTTTTTACCCATGAATCATTCCCTTTTAATTGGCGAATTATGGCGCGATAGGGGATAAAGGCTAGCACCCAGCGATAAAAGGCAAAGCTAAAGATTATTCTAAAAATTATTAAGCGATTTTTAGGTGGCTCTAAATTCGATTCGTGCCATTGTTTTTCAATCATTAACGTATTGACCAGGTTTTCTGTGAATAATAATGTGAAAATAATTGCTAAACCAATTAATGGCCGATAGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAGTGATGACTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //