Array 1 10590-11819 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTHH01000019.1 Streptomyces sp. f51 scaffold19.1.size46901, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================================================================== ================== 10590 28 79.3 136 AA.G.A...........-.....T..... GCGCCTGGGTTGCGGGGCCTGCCTTCTCCGTCGCGTAGTCGGCTTTTGGGTGAGCGGCGGCGAGTCGGTGTCGCGCGACACCCCGCGTGGCGCGTTGCTTCAACATCCGTTCCTTGAAACGTGAAGAGCGTGATCG A [10611] 10755 29 69.0 32 T...G.CGT......CA..GC........ GTCACGATCGGGGCCGACGGCAGCCTGATCGT 10816 29 72.4 32 ...T...GT...G..A...G..C..C... GTGTTTCGGCCTGCGACCTAATCCTGTCGGCA C [10821] 10878 29 82.8 30 .....T......T........A.AG.... GAGGTACTACGGGACGGGTCGGGGCGGGGG T [10882] 10938 29 93.1 32 .C...........A............... GCGCAGACACCGGCCTTGCCCGCACCAAACTT 10999 29 96.6 32 ..A.......................... AACAAGGGCACCTGGCCCGGCATGATCGGACA 11060 29 96.6 32 ....................C........ GCGCGGCGCGGCGACACCGGCCGGCGCACCAC 11121 29 96.6 32 ............G................ TCGTTCATCTGGTTGAAGACTTCGTCCGGCGC 11182 29 100.0 32 ............................. TCCTGGCGGGTGGTGAGGAGGTCGGTGGAGTG 11243 29 96.6 32 .....T....................... CCCTCAACCTCATGGAAGGTTCCATCATGCTC 11304 29 100.0 32 ............................. CGCCATCACATTGCGTGACAGCGGAGCATCTC 11365 29 96.6 32 ..........T.................. CTCCAGCCCACCGTGTACTGGACCCCGGCGGC 11426 29 100.0 32 ............................. TGGCGCACCAACCTGGAGAAGATCCAGCGGCG 11487 29 100.0 32 ............................. TCATCAGGTGTCTACGGACAGTGATCCAACTC 11548 29 100.0 32 ............................. GCCGCCGCGATGAGGAGGAGGTCGGTGTACCG 11609 29 100.0 32 ............................. AAGAACTACCCCGACACCCTGACGAGCGTGGC 11670 29 100.0 31 ............................. CGTGAGCCTGTTCTCCCGCAGGGGCGCGACC 11730 29 93.1 32 ......................C.....C TCTCCGAGACGTCGTACACGGTCGCCAGTTCC 11791 29 96.6 0 ............A................ | ========== ====== ====== ====== ============================= ======================================================================================================================================== ================== 19 29 93.1 38 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : AACGCCACCGGTCAACCGGCCCCCGTGCCGTCGTCCTTCGCTGACTGCCTGCGCACCGAGTCGGGCCCGCCCGCTCTGCAGCAGGTCGACCGCTGTGTCGCCGACCTCGGCGCCCTGGGCTACAAGCAGCAGGTGACGTACCAGCCCGCCGGGAACTTCTGGGCCCTTCAATGGGCCGAGACCGGGCTCTATCTCGGCCTCGCCCTGGCCCTGACCGGGTTCTGTGCCTGGTGGATCCGCCGCCGAGTGACCTGACAGACGCCAGCCCCACTACAGGGGTAGCCGTGAGGGGCAGCCGGGACCCGGCCGCCCCTCACGGACTTGGCGGGCGCGTGGTGGTCAGCACGGCACTCCGTGCCCTGATCAACGAACTCGTCAGCTGGCTCTTCTGAGCCATCGGCGACGGATCCCAGAGATCCGTCGCCTCTCAACACGGCGAGGATGTCCCGCTGGCTTCCGAGGTATCCCCACTACGGCTATACCTTCCCGCGCCTCCAGCA # Right flank : GCGCGGCAAAGCTCCCCACGCCCCGCTGTCTTAAATTGGGTTCGCCCCCGAATGCTCCTCCCGGGCCTCTACGATGCGTTCTGTCCCGGACTCACGGTTCGGGGGCCACAAATGAATACCCGCACAGCTGGGGGAAGCCGGTGGGAGTCCGGCGCTGACCTGCAACCGTGAACGGTGCTTTCTATGCCGTGAGTCGGAGTACCCGGAGGTGCGGTGTGCACTGCTTCTCACTGTCATGGTCTGCAGGACGAAGCCCCGGCCCGGCTCGGCACCTCAGTGCGCTCCCTCCGAAGGGCGCCGCGTGTGGTGTGCACGGGTGAGGTCGATGGGTTCGCATCGGCAGACCCGAAGATCCGATCGGGAAGGCACCTCATGCACCGGACACTCACCCACTGCTCCGCGATTACCGCGGCCGCCCTGGCCCTCGTCCTGGCCACCCCCTCTGTGGCGCTGGCGCAGGCGCAGCCCGCGACGAACACCAACAAGGCCGTCAAGGTGAC # Questionable array : NO Score: 4.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.51, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [34-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 16458-13233 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTHH01000019.1 Streptomyces sp. f51 scaffold19.1.size46901, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================================================================================================= ================== 16457 33 93.9 28 .............................GA.. CGACCCGATGACCGAGCTACCCCACGCC 16396 33 90.9 28 .............................GA.G ACCCCGTCATGCCGCTGAGCAAGGACGA 16335 33 93.9 28 .............................T..C CGGCAGTGCCGCCGGGGTCGACGCGGTC 16274 33 93.9 28 ...............................CC GCCGGATTGCCCGGCGGGGCTTCGTCGT 16213 33 87.9 28 .............................TACT TCGGGGACATCGCCATCCGGGCGGCTGC 16152 33 90.9 28 ..............................TCG CACTCGCCGCCTAGGAGGCCAGCGTGGA 16091 33 90.9 28 ..............................GCC CATGGTGGTCCGTGCCGCCCGGACCGTT 16030 33 90.9 28 ..............................GAC GCGGCTGATCCGCGAGGCGTACACGCCG 15969 33 90.9 28 ..............................ACG GCACAGAACACACCGAGGCATTCCTGAA 15908 33 90.9 28 .............................G.AG GCAACGCACAGGCCGCCGCCGTCTCGGC 15847 33 90.9 28 .............................TA.T CCCGGTCGGCGTAGAGTTTCCCGCTCTC 15786 33 93.9 28 ..............................T.C TCGCCGAGCTGCCGACGATCCAGTTCGA 15725 33 97.0 27 .............................G... GGCAGCCGTGTCATCCCCGCCGCCATC G [15697] 15664 33 93.9 28 .............................T.C. GCAGGCCCAGGCCGACTACAAGACGGCG 15603 33 93.9 28 .............................G..T CGGTGCAGGTGGAGCCCGGGGCGACGAT 15542 33 90.9 28 .............................A.CG AGACCCGGATGCAGATCAGCGCGGGCAG 15481 33 93.9 28 ..............................TC. CCACCAACCCCGGGGTGTGGGTGATGTC 15420 33 93.9 26 ..............................T.C GACGAGACGCAGACCCTGGCGGCCGC AG [15390] 15359 33 87.9 28 .............................ATCC CGTCCCATGCCGCCTCGTAGAGCTGCCC 15298 33 87.9 31 ..............T..............GT.C CGAATTTCGCGGCCGCCTTCAACGGGTCGTC 15234 33 93.9 26 ...............................AG GCTGAGGGCATGAGTCCCTCCCTGCA TG [15205] 15173 33 87.9 28 ........T....................T.CC CGTAGACCACGGCGTCCGTCTCCGGATC 15112 33 90.9 28 ..............T...............G.T CGTACTGCTCGTGCCAGATCACGGACGA 15051 33 78.8 28 ...T.TT......G...............TA.T GGAGCGACCGATACGTGCCGCCCGGGCC 14990 33 90.9 29 .C.............................CT CATCCCGCGCCGTCGACATGGTCACCGCC 14928 33 87.9 28 .............................GTCT CGGAGTGGCAGCGCGTCGAGTGGGACGG 14867 33 87.9 28 .............................GTCG CGGCTGGCGAGAATGGGTGACGGGTGGC 14806 33 100.0 28 ................................. CGCGCTCGGCGGTGCAGACGGATCATGG 14745 33 90.9 28 ...A..........................T.C TGCGCAACCTGGTCAGCCGGGGCCGCGC 14684 33 90.9 28 .............................A.CG TGGGGCCCGCCATCGCCATGACGGCGGT 14623 33 84.8 28 .................A...........GGTG GTGGGGAGCGGGCCGGGCGGGTTGCCAC 14562 33 97.0 28 ................................G TGCCGGCCTCCGCGGCCGCGATCCCGCT 14501 33 93.9 27 .............................T..G CGGCGTCCTGCTCTGGCAGGCCGAGGT G [14471] 14440 33 90.9 28 .......................T.....T.C. GGGTGGTCCGGTACACGTGGGCGGCCGC 14379 33 90.9 28 .............................GT.G CCCGCCGCGTGGCGTACGGGGTGCACCG 14318 33 97.0 27 .............................A... CACCCTGTCCGGGATCGCGGCCGCCCA G [14290] 14257 33 90.9 28 ..............A..............G..T TCTTCCTGGTCGCCGCCCCGTTCGTCCT 14196 33 97.0 28 .............................G... TGCGGATCGGCTTGACGTCGGACTCGTT 14135 33 90.9 27 .............................GG.G CCGCGCCCCGCCGTGGTGGCCGGGGGG 14075 33 93.9 28 .............................A..T ACATCCGGACCCGCCTGGGGGACAAGGT 14014 33 97.0 28 ..............................A.. TCCGCGAGCTGGCCTTCGCCGGCTCCGC 13953 33 84.8 28 ....................A........TACT TCTCAACCAGCTCGGCCCACATGTCGAG 13892 33 93.9 28 .............................TT.. GGGCCAGGGTGATCGCTCGCTCGCCTCG 13831 33 97.0 28 ................................T CCCTGCTGGTGGAGGCTGATCCCGGTGG 13770 33 90.9 28 .............................GAC. ACCGGTGGGCGGACGTTCTCGACCTGAT 13709 32 90.9 28 .................-...........T..G CGGCGACCATGCCGCCCCCTTTCATGAC 13649 33 100.0 28 ................................. CCGTCCTCCGCCCGGTCCTCCCCGTCCG 13588 33 93.9 27 ...........T...................T. CCGGTCGCAGAACCTGAACCGGCTGAT A [13558] 13527 33 93.9 28 ..............................GC. GCGGCCACACGATCCCCGCCCGGTCACC 13466 32 93.9 26 ....-........................A... GTGGACAATGTGTCTCCAGCGTAGGA AG [13437] 13406 32 81.8 109 .......T-.....T..............AT.C CCGGCGCCTACGGGAACGGCGTCGTGGTTTCCTCCCACCGAGACGGCGGGTTCCGTGGCTGCCGACGCGGGAGCTCTGTTGCGGGTTGACGCTAAGCGGCCCCAGGGGC 13265 33 84.8 0 A.T........T.................GT.. | ========== ====== ====== ====== ================================= ============================================================================================================= ================== 52 33 91.7 29 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGA # Left flank : GTGCAGGCCAGCACACAGGCCGACGAGCGCCCGAGCGCGATCCAGTTCCCCGGACAAGCCCATCCCCGCGGCTATACGCGCCCTCTGGTTCTCCGCCAAGTACACATCCCACAAGTGGAGCGCCATCGCGGCCGCGTCGAGAAGATGTCTCACCAGCGGGTAGGGCGGCAGTGACGGATCCAATCCACGGTACTTTCCCCACGCCGACTCATCCACCACACTCCGCCTGTGCAGCACGCCAGTCCTCTCCGCTCCGTCACTCGAACCTGATCTCGCGAAGGCAGCAGTACTGCCACCGATCGCATACAAGCACCTGGCGCTGACATCGATGTGGCTATCCACGTTCAGACCCTGAGCCTCGACCGGGCACCCGTGCTCGCTCTGACGACTTCGTAAGCTGCAGCTGGATAAGGTGATGACATGCGTCCGACGGAGCGTCTCACCTCCTCAAGAATGGCAAAGAAGATGCAATGCCACTCTTGAGGCGCAGGTCAGGAAGT # Right flank : AGCGGACGGCGGGGCACCAGCTATGGCGGCGAGCATTGCGGTTCGCGCGGCGGTGGATTCCTGTTGGCCGGTTACCAAACCTCGACCACAACGGATAACTGCCGTCTTACGATGAGTGTTCGCCGACGCTGGGAGCCCACCGTGCTGGATCACACCCCGGACTACCCGCCGAGGACCCAACCGCCACCAAAACGATCGATCTCTCCGCCGCGGCCGGAGACGAGCCTTGCGGGCACGGCCCGGGCCAGGATGCAGGTGCGAAACCGGCGCACGGCCGCGTGGTCGCTGGAGGCCGCCCCGTGGTCAGCGGCAAAAGCGTCCGCGCACGTGCTGGACCGGCTGCACGAGTGGGGCTACCGAGAGGCCGACACGGCAGCGGCCGCGCTGACGGACCTGCTGGTGCGGACCGCTGTCGCGGACGGCGGACGGCGGGTTTCCGTGCCCCTCGCGGACCAGAAGTTGAGCAGCGTCTCGACCTCGACGAGCTAGTCGAGGTCGAT # Questionable array : NO Score: 4.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:-0.14, 8:1, 9:0.06, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 26338-28806 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTHH01000019.1 Streptomyces sp. f51 scaffold19.1.size46901, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 26338 29 100.0 32 ............................. GTGTGCGCCCCGACCTCGCGCCTCAACGTGGT 26399 29 100.0 32 ............................. TGCTTTGTCTTCCCGCCCGCCACTCGGGTTCG 26460 29 100.0 32 ............................. CGCGGCCAGAAGCCCCGTCAGGGCGCGAACTC 26521 29 100.0 32 ............................. CGCCGGGCCACGATCGCCAAGCAGAAGGAAGC 26582 29 100.0 32 ............................. CGCGACGGCACAGGCGGTTTCACCGGAGTGTT 26643 29 100.0 32 ............................. CGGCGCACGGGGCCGAGGGCCTGAGTGCCGTC 26704 29 100.0 32 ............................. GTGAGCGAGACCAGCGCCGCACCGGCCCCGGA 26765 29 100.0 32 ............................. CCCGGCAACAACAGCATGGACGTCTTCCCGAT 26826 29 100.0 32 ............................. CGGGGCGCCCCCGATGAATGCTGGCCCTTCAC 26887 29 100.0 32 ............................. TCCTCCTGGGACGCCCTCAAGGTCCCCAAGTC 26948 29 100.0 32 ............................. GAGTGCACCCACATCGGCGGGTCGTTCTGGCC 27009 29 100.0 32 ............................. GTACCGGTCCCGCGTACCAGCCGGGCCGAACC 27070 29 96.6 32 ............................C GACCGTCTCACCGGAATTGCCGGCCCGGTTGC 27131 29 100.0 32 ............................. GACCGCTGCTCCCACATCCGCGAGGAACAGGC 27192 29 100.0 32 ............................. CCGTGGCTGACGGTGTGGCCGTTGATGATGAG 27253 29 100.0 32 ............................. ACACGCGTCGCCGCCCGGGTCCTGCTGGCCGA 27314 29 100.0 32 ............................. CCCAGAGTGCTGCCTGCGCCTGCGTTCTGTGC 27375 29 100.0 32 ............................. CCGACGGTCGAGGCCGGGTCGTTGGAGGCGTT 27436 29 100.0 32 ............................. ACGACCAGCGACAGGTACGGGCACCTCCTGGA 27497 29 100.0 32 ............................. GCCCTCGTCGCGGAGCGCCTGGAGCAGCCTGT 27558 29 100.0 32 ............................. TCGACGTTCGCCCGGCCGAACACCGTGCTGGG 27619 29 100.0 32 ............................. CGGGCGGCGACCCAGCCGGTCGACCAGCCGGT 27680 29 100.0 32 ............................. TCGCGGGGCGTCCACCACCAGCATCCCAGAGA 27741 29 100.0 32 ............................. TACGAGGGAACCATCCCTACGAATGAACATGC 27802 29 100.0 32 ............................. CAGCAGAAGGTGCTCGCGCAGCAGCAGCGGAT 27863 29 100.0 32 ............................. GCGCTCGTGTCCAGCACGGTGACCGACACGGG 27924 29 100.0 32 ............................. TCCCGGGACAAGGTAGCGGCGACGCTGAAGAC 27985 29 100.0 32 ............................. GCGGCCGGCACCGGGACGGACGGGTCGAGGCA 28046 29 96.6 32 ............................A CTACCTGGCACCCGGCCCGGCCCGCGAGCAAC 28107 29 100.0 32 ............................. CAGCGCTACCCCGTCCTGATCGGCACGGACAC 28168 29 100.0 32 ............................. CGGGAGGTCTTGGGCCCCTTGGCGGGGGCACT 28229 29 100.0 32 ............................. ACGCCAACCGGGCCATCGACCAGGGCGAATTG 28290 29 96.6 32 ......................A...... CGACTCGGAGCGCGCATCATCACCGTCGACCC 28351 29 100.0 32 ............................. GTCGAGGCCGCCGTGTCCCGCGACATCAGCGA 28412 29 100.0 32 ............................. GTCGCGGCATCGACGTAGACGCTCATCAGGCT 28473 29 100.0 32 ............................. CGCCGCGCACCTGGGACGAGTGGACGTGGCCC 28534 29 100.0 32 ............................. CAGGCCAACACGAATCAGGCGGCGCTCGTCAA 28595 29 100.0 32 ............................. CGCGGCCCGGCCACGGACGTGCTCCGTGACGT 28656 29 100.0 32 ............................. CCCATCCGCTCCTCGTGGTCCTGGTGCTCGTC 28717 29 100.0 32 ............................. GAGCGGGCCCGGGGCACCAAGGACGAGCCGGG 28778 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.8 32 GTGCTCCCCGCCGACGCGGGGGTGTTCCG # Left flank : CCTTCCGCGCATCGTCCGGGACGCCCAGAGCCTCCTGACGCCACGCTCCATGGATGCCACCGACGAAGACGAGCCACAGGAGAAGCGCGACGTTCAGCTGGTCCACCTCTGGGACCCCAAGGCCGACGCCCTTCCCGCAGGCGTCAACTACGCGGCCCGAGGTGAATGATGCCGTCCATGCTCGTGATCGCCACCACGGCCGTTCCTGATCACCTTCGGGGAGCGCTCAGCCGTTGGACCAGTGAGGTCGTTCCCGGCATCTTCGTCGGGAGCGTCTCGGCCCGCGTCCGCGACCAGCTCTGGCAAGCCGTCACCGACACCGTAGGCAATGGCGCCGCCGTCCTCGTCCACCCCGCCCCCACCGAACAGGGCTACGCCATCCGAACCGCCGGCACCCGCCGCCGCGTCCCCGCCGACTTCGACGGGCTCACCCTGATCCGTATGACCGCTCCAAAGTTAAAGGAAATGCAAAGCCCCTCTTAAGGTGCAGGTCAGGAAGT # Right flank : GCCGCCGTTCCTGCTGACGGGGAAGACGCTGCGGGACCAGGGGCTGACGGTGACGGGGATGCTGCTGGAGGGGTGGACGGAGCAGCAGCTGCGTCAGGTGGTTGCTGGCCGGCCGTTGCCGGATGAGGTGAAGACGACGGTGGGGGCGATCGTGGCCAGGAGGCTGCGTGACGCGATTGCAGGGGGCCCGCCTTCCTTCGGTCCCTAGGTTGCCGTCGCAGGCCGCTGAGAGGCGTACGGAGGGGCCCTCTACGCCGTCTCCGCCGCAATGGGTGGACCAGAGAGCATCGTGGATGCCCAGCGGGTCAGCCAGGAGTGCGTTGGCGACGACGGCTTCTGCGGCCGTCCGGTGCGCCCCGGGTCGTCGTACTGCTGGCCGTGCTCAGCCATCTACGGCGTAAGCGCCGCCTACTGACTCGGTCGGGGCGGCCCTGAACCTTGGCCGCCCCGACCGCTCGCTTTCAAGCAACCGTCAGATTGGAGACCCGTGATTCCAGCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCGACGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCCGACGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 31357-32304 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTHH01000019.1 Streptomyces sp. f51 scaffold19.1.size46901, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 31357 29 96.6 32 ................A............ TCCTCTGCACAGCGAGTGCTGACAACGCCCGT 31418 29 100.0 32 ............................. AAGACGGCCATGCGGTTCGTGCCCAAGTACAA CGA [31429] 31482 29 100.0 32 ............................. AACCGGGACCAGACTTCCCCGCCCGCGCCCGC 31543 29 100.0 32 ............................. ACCGGCAGGTCTACGAGCTGGTCCACCACGCC 31604 29 100.0 32 ............................. CCCTTGGGCGTCCACAGGTCGTCCAGCCGCAC 31665 29 100.0 32 ............................. CTTCCGAACCACAACTGAAGATCCCTAAACGC 31726 29 100.0 32 ............................. GACGAGGAGCCGGCACAGCAGCCCGAGCCCGT 31787 29 100.0 32 ............................. CGCGGATTCGGCCAGAATGCGGGCCGGGCCTG 31848 29 100.0 32 ............................. ACCTTCGTGCCGGACTGGGCCATGAAGGCATC 31909 29 100.0 32 ............................. GGGGCGGGAATCCCCTCTCGGCACCGGCCCCC 31970 29 96.6 32 ..............A.............. CGCTGGCGCGGTCGATGCACGTGAGCCTCACC 32031 29 100.0 32 ............................. CTTACGCCCCGGAGTGGACACCCCTACACGCA 32092 29 100.0 32 ............................. GCCGCCGGGCAGGAAGTGCCGGCGGAAGCGCT 32153 29 100.0 32 ............................. CCGGAACAGGTCGCCAAGGCCGTGGAGCTCCT C [32178] 32215 29 100.0 32 ............................. TCCTTCGGGAGCATCCCGACGATGCTCGTCAC 32276 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 99.6 32 GTGCTCCCCGCCGACGCGGGGGTGTTCCG # Left flank : CTACCCGCGAAGCGGCCGCGAGTCCGTACCCGGGAAAAGGCTCGAGCAAGCCCGGCATCTACTGGGTGAAGCCCTCGACGAGCTGGAGAACTGCCTCTACGACGAGCACCCTCACGAAGCTTCGCTGCACGTGTACTCCAGAGGCCGCCAGTAGGCGCACCGCTGGACTACGGCAGACCGAAGCCCCCGACCATGCCGCGGTCGGGGGCTTCACGCTGAGCATGTCCGCGACCGGGGTGCTACTCGCCGTCCGAGGCCGCCTCGCTGTCACCGTCCGGCCGGGGGACCTTCTTCTCCCACTCACGGTTCGCCGCCACGAGGGCCGCTGCTGCTGCCGCCGCCGGCACTGCCCCGTCCTCCATCAGCCCTGACGCCGTATCACTCGACACGATCACCGTCATCAGCGCCCCGAACACGGCGAGGTACACGAACGCCAGGAACAGGCGCCGCTTTACCTCCCATGACAAGCCCGTGCCCTCGGCGTTGACGAACGCCAACCC # Right flank : GTACGGGAACACGGACACGCCGCCCGTGGCCGAGTGCTCTCCGCCGAAGCGGATGGCGACGATCGTGAGGGACGATGTGTCCTCCGCCTGGGCGAAGGTGAGCCGATCTGCGGGCAGAGGGTCACCTCGTCGACGTAGTGCTCTCCACGCCTGCGGGGATGGCCCCGCCCGAGATCACACCTGAGGGCTGTTCTGTAGCCCTGATGGATCATTGTGCGCGTCAGATGCGGTGCATCGTAGGGCCGTAGGGGCGTTCGCGTACTGGATGATCCCGGGCGCGGAGAACGCGGTGAGGTGCCTGAGCTGTCGTGGTGCGCCCGCCAGGGGTTACGGGGCAGTCCGAAGGGCTTCGAGCAGGCGCTCGTACGCCCGCTTTGGTCGCAGGTCCGTGTCCCATGGCAGGGAATCGGCGGGGCGTGGGGGGTAGATCTTGGTGTCGGCGGTGGAGCCGTACCGGTCGGTGAATCCCCAGGTGGAGAATGATGTGCAGTTCGGCTCCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCGACGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCCGACGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.15 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //