Array 1 8237-8624 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQOD01000074.1 Salinivibrio socompensis S35 contig74, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8237 28 100.0 32 ............................ AAGTAACAGCAGCGATGCTTAATGAAAATATC 8297 28 100.0 32 ............................ CAAAAGATAAAGAATACTGCTCTTATGGTCGC 8357 28 100.0 32 ............................ TGAATGGATCTGCTGCGACATTGAAACCCACC 8417 28 100.0 32 ............................ ATCGGGTTAAATGTTCTGGTTTCCATTCCTAA 8477 28 100.0 32 ............................ GCCATCATCGTCGCCGCCTGTGTCCCCATTAT 8537 28 100.0 32 ............................ CAACACCTGGGGCATGAGGGCAAGCACAAAAT 8597 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGACTATGCCTACTTTAAACGCTGGAACTACAAATCGCCGCAGCGACTGTATAAAAACCTCAACCGGCGCGCGGCCGCGATTGCCAGCAAAAATGGTTACGAAGAGGAGGAAGTAAAGCGTCGTTTGTTGGAAAACATTAAAACAGACGACAAACGCTGGTCGCTGCCCTTTATTCAAGTGACCAGCCTTTCTAGCCAAAAGCGGGCAGGGCAGCCTCACACTGAACAGTTTGCTTTGTATATCGAGCGGGAGACAACAAAACAGCCGCCAAACAATGGCCAACCATTCACCTGTTATGGTCTCAGCCGACGTGAAAGCGATCAGCAATGCGCGGTACCGTGTTTTTGAGGGGGAAACCCCTTTTTACCCCTTCTTTTGGGGCTCTTTAAAAATAAACAGAAAATACAGTCAGTTACAGCAGGTGCTTTTTAACAAGGGTAAAAGATGACTTTTATCCTAACGGCCTGTTGTACCTGACGATTGTTACGTTATTCTATT # Right flank : AAGATGAAACTGTTTCGCTCGCGAATATCGTCGTTCACTGCCGCACAGGCAGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3-636 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQOD01000163.1 Salinivibrio socompensis S35 contig163, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================== ================== 3 28 96.4 36 ............G............... CGTGAGTGGGCAGAGAACCGCGGCGACGGTCATCAG 67 28 96.4 32 K........................... ACCTGCTTTTTGAGCTTGGCGCGTGCTTTTAA 127 28 100.0 94 ............................ GGACAGATCGAGCTGTTGGCTGGCTTCGTACAGTTCACTGCCGCACAGGCAGRCTTAGAAAAGTGAGATGTTGYCGATTTATACTCGCCGTCTT 249 28 100.0 32 ............................ TCGTCGCGGGCATAGACGTTAGGCAGGAAAAT 309 28 100.0 32 ............................ GTCCTCATTGGCCGGACACTCTGCGACCCACA 369 28 100.0 32 ............................ CCGACTGATTGCGCGCAGCAAGCTGAAAAAGC 429 28 96.4 32 A........................... CTGAATCGGAAGCACTCGAAAGAATGACGCCC 489 28 100.0 32 ............................ AAGTAACGTTAGATTTGTTCTTCGCTTGGAAC 549 28 100.0 32 ............................ ACGCTGAGCCGCAAAGAGCTGATTGCCATTTA 609 28 85.7 0 .....................G...GTG | ========== ====== ====== ====== ============================ ============================================================================================== ================== 10 28 97.5 39 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATG # Right flank : GACACAAGCCCCGGCGCAATGTTGGATATGGGCACATTGCCAACGGGCGCCAGTTGCACTGCGCGCGGCATACATCGTGATAATAATTGGCCTTGTGCTGGCGCTTATGCCGACCTACGAACAGGCAGCGTCGATGACACAAGCCCCGACATATGGTTGGGTTTATCTCCGCAGCTGCTTTGAGTTTTCCTCCTTACCAATGTTTCTCTCGTCGTTGATGCCTGTCTAGGTTTTCCATAGAAATGACTAATTTAACGCATCCTTGAGTCAGTTAACTTTATGACCTTACTTTAATCGTTGAATTTATTTCTATTGAGTAATCAAAAACTAATCGACGTGGAGACCATTCCTGTCCAGCTTTTTTTAATTGATGGCGAGAATCTATTCTACGATAAAACGGTAGCGACATTTTGGTCGATGTTGTCTGTTGTTGAGTGGTAGGAGTGGAATATGAACATCAATAACACCATGAAGTTAGTGTTTTTTATTATTGGTGCCGG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.57, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //