Array 1 104844-103555 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJGNR010000002.1 Stappia indica strain FXH-213 NODE_2_length_715540_cov_169.863043, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    104843	    36	 100.0	    30	....................................	GTAGGACCGGGCGCGTCGCGCCGAGATCCG 	
    104777	    36	 100.0	    30	....................................	CCATGTGACGACGAACCGGCCGTTGAGCCG 	
    104711	    36	 100.0	    30	....................................	TTGCGCGCCTCCGCCCGTACGTCGTTTGCC 	
    104645	    36	 100.0	    30	....................................	CAGCGCCTTCAACTCAGGCGTCTTTGCCGA 	
    104579	    36	 100.0	    31	....................................	GATCGCTTTTGCAAGTCGCTGGACGGCTTCA	
    104512	    36	 100.0	    30	....................................	CGGCCAGCCAATGCTTAGCAGACCGTCAAC 	
    104446	    36	 100.0	    30	....................................	ACATCCTCGACCGTGTAGTCAAAGGACTCC 	
    104380	    36	 100.0	    30	....................................	AATGATGTGACAGTGCATGCGGCGCTTTGA 	
    104314	    36	 100.0	    29	....................................	CGCACGGAGCAGATCGAGACCGGCCGGGG  	
    104249	    36	 100.0	    30	....................................	CCGCGCGAGCCTCTTCCCCTCTTACAAACG 	
    104183	    36	 100.0	    30	....................................	TTGAAATGGGACGATGAGGGCCCGGGAGAG 	
    104117	    36	 100.0	    30	....................................	CACTTGGAACGCGTCAACAGATGACGAAAA 	
    104051	    36	 100.0	    30	....................................	TGCCAAGGGTCATCGGCGGGCATTCGACGG 	
    103985	    36	 100.0	    30	....................................	GAGCGGGTCGACACGATGTTCTCGCGCGCC 	
    103919	    36	 100.0	    30	....................................	TTCATGTCCTTGGGCGTGCACGACGTCTCG 	
    103853	    36	 100.0	    30	....................................	GAGACGGTGTCGCGGGCCGCCTGCCAGGCG 	
    103787	    36	 100.0	    30	....................................	AGGAGAGCGCGAAGGCGGCCGGTGAGCCGG 	
    103721	    36	 100.0	    30	....................................	GCTTGCAGCGCGCACAGCACCAGCGCCAGA 	
    103655	    36	 100.0	    30	....................................	GTGCAGGGCCTGCAGGGCGCGGTATTCCGG 	
    103589	    35	  88.9	     0	.............................G-..G.T	|                              	
==========	======	======	======	====================================	===============================	==================
        20	    36	  99.4	    30	AGGATAGCTGTTCAGAAATCGCAGGCCAACCGCAAC	                               	       

# Left flank :   CGAGCCCCTGGTTCTGGCCGGTCTCGGCCGGCTGGCGGAGGATCGCGAATGACCACGCTTCACACCCAACGACGAAAGGAGCGGCCGGAGGGGCCGACCCATCTGTCCGCCTATCGGCTCATGTGGATGCTCGTCACCTTCGATCTGCCTGTCGACACGAAGAAACATCGGGCCGACGCAACCAGGTTCCGGCAGTTTCTTCTGGATCAGGGGTTCGAGCGAAGTCAGTTTTCCAACTATCTCCGGCTGGTCAACGGTCAGGAAAACTTCGATGCCCATGTCAGGCGGATCGGCGGCAACCTGCCGGAACGGGGCGATGTCTTCATCTTCCAGTTTACCGACCGGCAGTACGAGAACATCGTGCGCTTCAGCGACCAGTCGCGACGGCGCCGGCGAAAAAACCCCGAGCAGATTGCGCTGTTTTGAGGAGATTCGGGATGGTTTTCCTTGCGGTCCGGCGGCAATTTCCTGTTTCTTTTCAGGAGACTGCCGCCGGATCC
# Right flank :  CCCCCTCACTTCCCCTTGCGGATGAAGACGGCGTCTTCCCAGTCCGGCTGGACGCGGGGGTAGAGGGTGACGACGTCGGGATCGTGGCCGGGCAGGATCTCGCAACCGGCCTCGATCAGCTCGTGCAGCACGCGGTAGCCCTCGACCGTCCGGTAATAATCGGCGAAGACCGGGAAGATCTGGCCGTCGGTCAGGTAGCGGCGCAGGTGCAGCGCGTCGGAGGCGATAACCAGCGGCGTCTCGCCGTCGACGACCAGGATTTGCAGCCCCTTCGAGTGGCCGCCGACGAGGCGGGCGGTCAGGCCCGGCAGCAGCGTGTAATCCCCCTCGTGGAAGCGCACCCGGTCGCGATAGACCATCTCCACCGCCGTCTTGACGTCCTCGACCGCGAAGGGCCTGCGCATGCGGGCGTGGCACATGCAGCGCCCGGTTGCATAGGCCATCTCCGCGTCCTGCAGGTGGATGGTCGCGTTCGGAAAGTGGCGCAGGTTTCCCGCATG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGGATAGCTGTTCAGAAATCGCAGGCCAACCGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched ACGCTAGCAGTTCAGAAATCGCAGGCCAACCGCAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.80,-1.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [30.0-43.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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