Array 1 74756-75394 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNXT01000033.1 Streptomyces alboflavus strain NRRL B-2373 contig33.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 74756 28 69.0 33 TG.TC...GC-G............A.... GTCTTGAGCCGCGGCTCGTCGGCCAGGATGTTG G [74769] 74818 29 69.0 32 TG.TC...GCTG.C............... GGCCGTATCCAGGTCCGTGCCAACCCGGACGA 74879 29 89.7 32 ...........G........A....C... AGGTGCCACTTCTTGTCCGGCGGGCAGGTGGC 74940 29 100.0 32 ............................. GTTAAGGACTTCGTCAAGGGGCTGATCCCGGG 75001 29 86.2 32 .C.........G.C..............G ATGACGCCCTTCGAGATGCTGGGCCGGATCGG T [75012] 75063 29 93.1 32 ...........GT................ CCGTTGCCGTAGTGCCCGACATAACACTCGGC 75124 29 93.1 32 ........................T...A CCCAACAAGCCGAAGGGCACCGCGTGGGAGTA 75185 29 75.9 31 ........T..G.AC..A..C...C.... GAGCGGTTCGCCGAGCAGACCTCCGCACGAG 75246 27 82.8 32 ...........G..--........A...T GCCGGTAAGGGCACCAACCGCACGGCCTGCGT 75305 29 72.4 32 ....C...T..GAAC..A.......C... GACCCGTGCAACGCCTGCACGGAGGTCAACAT C [75320] 75367 28 82.8 0 C.A..........A-.........A.... | ========== ====== ====== ====== ============================= ================================= ================== 11 29 83.1 32 GTGGTCCCCGCACGTGCGGGGGTGGTCCC # Left flank : CGGGAGTTCATCGGGCGGCACAACGGCCTCCCGGACGTCGTCCACGACCTGGCCTCCAGCCGGGCCTACCTCCAGGCGTACGCCGACAAGGCCGCCGCCGACACCGGCCGGATCTGCGGCATCCACCTGGACGGCGAGCTGGTCGGCGCGGTCATCCTGCGCACCATGGACGTGGCCAACGGCACCGCCGAGGCGGGCTGCTGGCTGGAGCCCGCGGCGGCCGGCAAGGGCCTGGTGACCCGGGCCGCCCGCACCCTCATCGACTGGGCCGTCGAGCACCGCGGCATCCACCGCGTGGACTGGTGGGTCTCCTCGGCCAACGCCCCCAGCATCGCCGTCGCCCGCCGCCTCGGCATGACCCGCGACGGCGTCCTCCGGGAGAGCCATCTGTACCGGGGGCAGCGGCACGACGAGGAGATCTGGTCGGTCCTCGCCCCGGAGTGGCGGGCGGCGAAGTCGGAGGCGGCGTCGGCGGGTTGAGCCCCGGGGCTGGGTTCCCC # Right flank : CCGGCTCTGCACCTCCACGCTCAAGCGCGACGAGCGGTCCCCGCACCCGCGGGGCAACGGGCCGGGCCGGGCCGCACCGCCGACCGAGCACACAGGCGAACTGCCGCCACACACACCGAGCCGAGCCCGGCGACCTCCCCGGGACGGGGCCTCAGCACCGCCGCTCCGACCCCGGCCTCTCCGCCTCCACCACGCCGTCCACCTCGCCCTCGCCCCCGCCCTCGACCGCCACCTTCGCCGCCACCGAACCCACGGCGCCACCCCCCGAAGCCGCCGCGAGCCCCCCACCGCCCACCGGCCCCGGCCGCACTTCCGCCAACGTCCCCACCAGCGTCAGGACCACCGTCAACGCGACCCCCGCCAGGATCGCCGTCGACGGAGTCGTGACGCTGAGGAGGGCCCCGGCCATGGACCCGCTGACGGCGTACCCCGCCCCCACCGCCGCGTACATCAGGGAATAGCCCGCCGCGAGCGCGCTCGGGGGCAGGACCTCGCGCAGG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.23, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCACATGCGGGGGTGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [9-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 15928-16137 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNXT01000043.1 Streptomyces alboflavus strain NRRL B-2373 contig43.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 15928 29 100.0 32 ............................. TACGACGACGCCCCGAAGCTGTCCTTCCCGGG 15989 29 96.6 32 .........................C... TCAACGATGGCCAGCGCTGCGAAGAGAGGCGT 16050 27 86.2 32 ........--...........A......G CCGATGAGCGTCCCGGCCCAGTGGAGCTGGTA 16109 29 75.9 0 ...C........TC.......A...C.TG | ========== ====== ====== ====== ============================= ================================ ================== 4 29 89.7 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TTGTGCACCGCCTGGGTGGCCGCGTGACCGGCCCCGGGCCATGACCAACCGGCAAGGAGTCGACATGGGCGAAGACGGGGCCCGCGTGCCATCACCCAGGGGCAGCTCACTGTGGCGGACCCCATTGCGTGACGACGAGCGCAGAGCCGTCTCTTGCTGGCTCGCGCAGGCCCATCCCATCCCTCACCAGGTGCACGAGGAGTGGCCGGCCTGCCTGCGTGCCCCCCTGGCCCTCGCCGGCGGCGTCGGGGTCGCCGAGTGACGGCCACGGCCCTGGAGCGGGATGCGGCCCGCCTGTACGTGGCCTACCTGCGGCATCTGCGCCACTGCCCTCGGTCCCACGCGGGGCCCGCCTGCTCCGAAGGCACCCGCCTGCGCAAGGCGTGGACGGCGGCTCAGTGGGCGTCCCTCCGTGGCCGCCCTCTGCCGATCGGGGAGGATGCCAGTAATACGTAGGCGCTGCATGCCTGTCGGCCCCGCGAAGCCGCTGGTCGTGGCCT # Right flank : GAGTCGACACCCAGGTGCCAGCCCCGGCTTGGTGCTGTCCACGCGTACGCGGGGACCAGTGAAACATCCGGTTTGTGCTGCTTGCCCGTTGGGGCAGGTAGGGTCTGGGCGGGTTGGCCGCCGTGCAGGGCGGCCGTTTTCGTGCTCGGTGGTCGGGCCGGGTGAGGGAGGGGAGTGCTGTGGTTCTGGGGGGTGCGAGGCGGCGGGGTCTGGTGGGCGCTGTCGTGGTGGTCGCCGTGCTGGGCGGCGTGGTCGGGTGCGACGGTGAGGACAAGGAGGGCGGGAAGCGCGGTGCTCCCGGCGCCCGCGGCGGCCCCGCGCTCGACGCCGTCGACTCGCTCGTCGTCAAGGGGCGGGCCCCGAAGACCGGTTACGACCGGGCGCGGTTCGGGAGTCCCTGGGCCGACACCGACTCGAACGGGTGCGGGACCCGGGACGACATACTCAAGCGGGACCTGGACGGGGTGAAGTTCCGGGGCGGTGACTGCACGGTGGTGTCG # Questionable array : NO Score: 3.54 # Score Detail : 1:0, 2:3, 3:0, 4:0.49, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //