Array 1 4683836-4683350 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADANO010000002.1 Streptomyces clavuligerus strain K4567 unitig_0_quiver_arrow_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 4683835 29 100.0 36 ............................. ACCCACGCCGAGTCGGGAGCGTCCTGGCGCAGTGTG 4683770 29 96.6 35 ..................A.......... GAGATGGCCCAGTCGCCTTCTGCGGAGACGTGGAG 4683706 29 100.0 35 ............................. GTGATCCGGGCAGCGGGGTAGCCGAGAGCGCGCGC 4683642 29 100.0 35 ............................. AGGGTGAACGCCATGGGATGGCGTCGCCCGTCAAG 4683578 29 100.0 38 ............................. CGGTGGGTGAGCTGGACGTGGAGGCCGAGGGCCTGGGT 4683511 29 100.0 35 ............................. GACCCCTCCCCCGCCCCTTCCCGGGGCCCTCCCCA 4683447 29 96.6 40 ..........A.................. TCGCCGACGACGGCCAGGGGCTGGCCGAGCCAGTGCGCGC 4683378 29 75.9 0 ..............CC.CA..C..C..C. | ========== ====== ====== ====== ============================= ======================================== ================== 8 29 96.1 36 GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Left flank : GAGGAGCTGGCGACGACCGTTTACCACCGCTCCCTCAAGCGGAAGGTGAGCTACGAGGAGCTGATCCACCTGGAGGCCCTGAAGATCGTCCGCCTGTGTCTTGAGGGCCAGCCATACAAGCCGTTCCGGCCGTGGTGGTGAGGGGTTGTGTTCGTGATCCTCATCTATGACACGGCAGTGGAACGCAACCCCAGGGTGCTGAAGACCTGCCGGAAGTATCTGCACTGGACGCAGCGCAGCGTCTTCCAGGGCGAGCTGTCGGCGGCGCAGTACCGGGCGCTGATGGCCGCGCTCAGCGGTGCGATCGATCCGGGGTACGACAGCATCAGGACCTATACCGTGCGGTCTCCGGAGATGGTCGAGACGGATACGCTGGGCGTGGACCTCGGGGGGCCGGGGGACATCATCTGACCTGGGCGGATGCAGTACCGGCGGGTCGCCGCAGAAGCCGCCTCCAGCGAGGCTCGCGGATGGCCTCTGAGCTGCGATTTTACTCTCGG # Right flank : CCCACCTGACAGAACGCCAATTCAGTCAACCTTCCCCCCACCCCAAGTCATTCTTTGCCGCTTCATAGCCTTCGCAAGGTTTTCGCTTGACCCTGTGCGGAAGGCGGGCCGCCCTCGGGCCCGTACAGATGATCCTCGCGGGTCACGCCTGACCCGTGAGGCCGGTGAGCAATGCTCATGGCCGAAGGAGCCTCGGCATGATCCGTTTTTCCAGGACGCTTTCCTCACCTTGGTCCGCCGCAGCGGTCGGCGCGGCCGTTCTGTTCGGTGTGGCGGCGCCCGCGCCCGCGGCCCACGCCGCGCCGCTCGCGTGTGGGCAGACCGTCACGGTCAGCGTCGTGCTCAGCGCGAATCTGCTCAACTGTCCCGGTGACGGTCTGATCGTCGGGGGCAACGGCATCACCATCGATCTCAACGGGCGTACCGTCGACGGCGTCGGGCTTGGGGTCGGTATCCGGAACAACGGGTTCGACAACGTCACGGTCACCAACAGCGGCAGC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 4693353-4692930 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADANO010000002.1 Streptomyces clavuligerus strain K4567 unitig_0_quiver_arrow_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 4693352 29 100.0 37 ............................. CAAGGCCGACCCGATCGCGGACGAGCTTGACCGGCTG 4693286 29 100.0 36 ............................. GCGTCGGCCTCATCGAGCCAGCGTCGGGTCTCCGCC 4693221 29 100.0 36 ............................. ATGTGATTGCGTGGGACGGTGACCGTGCCGGTGCGG 4693156 29 89.7 37 ..............C..G...G....... ATGACCATGCGGACGGCGGCGACCATGGCGTCGGGGC 4693090 29 93.1 36 ..T.C........................ AGTGGCTGGTGACCCGCGTGCAGATGGCTGATCTCA 4693025 29 93.1 36 ........T................T... GGCCTGGAGAAGGAAGCAGGGACGGATCGCCTTGCC T [4693014] 4692959 29 93.1 0 .................G..A........ | C [4692945] ========== ====== ====== ====== ============================= ===================================== ================== 7 29 95.6 36 GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Left flank : ATGCCCAATTTCGATGTGATTTTGAAGCGTATGGGACCCCCTGCGCGCCGATAGGACACTGGGAACAGAAGGGACGAGTAGGGCGCAGGCATAACGACTGCACAACACCCGGTACCGGAGACGCCAAAAGCGCTGCGGGAATCGCACCTGCCTGCGATTATCGGTTCGCTTCACCGAACCTCCACATCGTGCCACGGAGGTGAAGCAACCGGGGCAAGGCGTCTGGAGCCCTATCCTTGTCCCCGGCAAGGTCACGGACCCATGGGCTCCGGGCACCATGGCCACACCATCGGCCCCCGTAGCTCAGTGGATAGAGCAGGCGCCTTCTAAGCGCTTGGCCGCAGGTTCGAGTCCTGCCGGGGGCGCACATCGCCCGATCATGTAGACCTCCCCCCGGAGGGCCGCCCGTGACACTTGGCGGGCACCTCTGGCCTCGGCGGGTGCATTACCGTCGGGTCGCTGCGGGAGTGGCTGGCCGAATGCTCCGCGTACGTCATCCC # Right flank : ATCCGTTCGGCCTGACCGGCGACTGCCCAATTCCCCCCTCCGTCAACGCGGACCCGGGATACAGCGACGGAGAGCATCAGGACCGTCTGCGCCCCGCCCCCTGTCAGGCAGGCCGGTGAGGATGATGCAGATTGCGGTGACCCCAGCGCTCACGTTCAACAGCCACGCATCAGACTTAGCCGCTTTCGCGGCAGCCCGGCCATTCACGTACACCACCAAGAGCCCCGCACCGCAAAAAATATGATTACTTCGTCGGCCAAATTTAGCCAGCGCGCATGCGCCGATGCAGCCCATTGATCTCCCCTACGGTCAGCCCCTCTCGGATGGAGTTGTAGTTCAGCTCTTTCCGAGCAAGACCGTTGGCATACGAGCGCCACGAATAATCGACCCGTTCAGCGCAGGGCCACTGGACAGGTGAGGCCGTCGGCCCTCACAGCCGACGGCCTCGCCCTCAACCCAACAGGGCTGATAACGAAAAACCTAACTGCAACTCCACCATT # Questionable array : NO Score: 2.89 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 1562992-1562719 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADANO010000003.1 Streptomyces clavuligerus strain K4567 unitig_1_quiver_arrow_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1562991 29 96.6 32 ............................G TCGTTTTCGGTTCCTTGCTGGCTTCCCTTGCC 1562930 29 96.6 32 ............................A GAAGGGCCTCTTCGCTATCGCCCTGTTGCTGT 1562869 29 100.0 32 ............................. CCTCCGGGACTGACAAGGGACCCGGGACCCTC 1562808 29 93.1 31 .....................G.....G. GTCCTCTTTGGAGCGGCCTGGCTGGCCGCGT C [1562782] 1562747 29 89.7 0 ........T.....T......G....... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 32 ATCCGCCCCGCCCGCGCGGGGATCGTCCC # Left flank : GGACACAGGTGTTCCTTTCACGAGGTAGGGCCTGTGATCGCGCCGCCCGGAGGGTCAGAGTTTCGGGCGGCGCACCTCCATGTTCAGGGGCATCCTGCAGTCCCACACCCACCACCAACACGACCCCCGTACAGGCGAGTTGATGACGGATGGGCAGCACAGGAGCACAGTCAGAAGCACGGACGGTGCGGGTGAGTACGACTGTCCCCGTGGCTCTCGGGGGCAGCAGCCGACCCTGGAGCACGGCGGCCGACGGCCGGGCCGCGGGCGTTCACACCGAGGCGGCGCAGGGACCTGTTCAGAACCCGGTACAGGGCATGCCAGGCCCAGCCAGACATCCGGAGATCCGTGCACGGGCGGCTTCCTTCCGGAACACCCCCCGCACTGGTCATGCCGACGGATACCGTGCACCTACCCAGACTGGACGACACAAAGGCCGGCCCGGAATGCAGGTAAACGAAAACAGCATGATCACCTGACAACACCCCAGGTCACGAAGT # Right flank : CGGGGTCGCCATGTCGGTCTGGACCTTCGCCCTGTCTGCCCGCGCCCGCGCGGGGCTCCGCTCTGGGTCCAGCGGGTCGGTGACCACATCAAAGCCACCGACCGCGGACGGCGGTGTCCGGATCATCCGCACCGGGAGTCAATGCCGCGGCACTCCTCCGCCACGGCCGCCAGGCGCAGCACCTCAAGGGCCACGGACCCGACCCCGGACAGGCCGAGCGTGAGGCGACGGTGCCGAACCCCGAGTTCCAGGCCGCCCGAGCAACATTCACCGCCCGCGAAAAGCCAGACTGCCGGACTCGATCTTGTCGAGCACCCGACTGTCGAGGAAGCGCCCGAGGACCTGTGGGACCGGGCGGCCGTACGCGCCGACGCCCACGCCGATCCGGCACTCGTCCGCAGCTGCGCGCAGCTCGCCGGGCACGACCAGGCCGTCGCCCTCTGCGGAACCACCGCCACCCGCATCCTCCACGCCGCCCTCGAAGACCACCGGGCAGACAT # Questionable array : NO Score: 3.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCGCCCCGCCCGCGCGGGGATCGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCCCCGCCCGCGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1564411-1564621 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADANO010000003.1 Streptomyces clavuligerus strain K4567 unitig_1_quiver_arrow_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1564411 28 85.7 33 ..............T.T.......G..T GTCGTGCTCGGGCTCGCTCACCGGGTCTCCTTG 1564472 28 100.0 33 ............................ CGAACCCCGGTGTCTCGACGGTTGCCTGGAGCA 1564533 28 100.0 33 ............................ ATCCCCAGACAGATCCGCTCGGACTCGCCCAGC 1564594 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 4 28 96.4 33 GAGCGACCCCCGCGCGGGCGGGGCAGAC # Left flank : GGATATCGAGGAGGCGGTCGCTCGGGACGATGAGGCGGCCGGGGTGTTCCGGCGGGGACGGACCCGACCGCGGCGCTCTCGGCACGGCCAGCGGGTCGGCGGGCCAGAACCAGCCCCAGTCCGGGTCCGGGGACCGGCGGCCGACCGTCGGCGGGTTTGTGCCGGTCTTCAACCCGGGCCCGGCCGAGCGCCGTACTCCCCCGCCGGTCGAGGCCGGTGTCGTCGACGACGTCCAGGACGAGGAGGAGCGGGACTGGCTCGAACCCCACGACGACCCCGCCCAGCAGTTCCACCGTCTCGTCCGGCACCTGGCCGCCGACGGTGACCAGCGCGCGGCGGCGGCCGGCCGGAAGGCCCGGCGGACGCTGGCGGAGATGGCCCCCGGCCATGTCCTCCAGCCCCTCCTCACCCCCACCCCCACCTCCACCAGTCGTGGGGGTGCCCGATGACCGCGGCCCGCCCGCCGCCCGCCGTAGCTCTTTGAACGGCACGGGACACGG # Right flank : CACTTCGTGACCTGCGGCGTTGTCAGGTGATCATGCTGTTTTCGTTTACCTGCATTCGCGGCTGGTCCTTGTGTGGTGCGGTCTGGGTAGGTGCACGGTATCTGCCGGAGTGACCGTCGCGGGGGGTGTCTCTATGTCCTTCGTCAAGGATGTGGTGCCGGGTGTATAGGTGTTTGTGGTGGTTATGCGGCGAGGGCGGCGGTGGGGGTTCGGGACTCGTAGAAGGTTCCGTCGCGGAGCATGGCGAACAGGACGCTGACGCGCTGGCGGGCGAGGCGGAGGAGTGCCTGTGTGGTGCTCCTGCTTCTGGTGCGGGCCGGGTGGAGTGGTTTCGTGGTGAGTGTGAGCCGTACGCGGCCTGGAAGGCCCGTACGCCCGTACTGCTGCAGGTCTGCCGGTCGTGTCCTGCGCGGGCGGCGTGCTGCGGGCTCGCGCTGCGGGACCTGGAGGGGATGGACCTGAACCGGGGTGAGGACGACATGGTCCGCGGCGGTCTGCTG # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGCGACCCCCGCGCGGGCGGGGCAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,0] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 3 1575357-1575596 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADANO010000003.1 Streptomyces clavuligerus strain K4567 unitig_1_quiver_arrow_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================ ================== 1575357 27 89.3 60 A.....-..............A...... TGGCTGGTGGAGTCCCCGTCGACGACGTGGACCGAGCTACCGCCGCGCCCCACCCAAAAA G,T,C [1575359,1575361,1575363] 1575447 28 100.0 33 ............................ CTCCGGGGGCGGAGGGAGATGGAGCGGATCCGG 1575508 28 100.0 33 ............................ CTGGAGCAGGCCGCCCGTACCGACGTCGGCGTC 1575569 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ============================================================ ================== 4 28 97.3 42 GGACGACCCCCGCGCGGGCGGGGCGGAT # Left flank : GGCTCGGGCTGCGGTGGAGTCGGCCGGGTCCGCTGCCGGTTCAGTGGAACCCCGCCTGGCCGGGGATGCCCGCGCGGTGGTCTTCGAGGGCGGCGTGGAGGATGCGAGCGGCTCGGGTTCCGTAGAGAGCGACCGCCTGGTCGTGGCCCGCGTGGCGGGCGTAGGCGAGGACGAGGCCAGGGTCGGTCTCGGCGTCGGCGCGCACGGCCGCCCGGTCCCAGGCGTCCTCGGGCGCGGTGTCGACGGTGGGGTATTCGACGAGGTCGAGGTCAGTGTTCTGGTTTTCGCGGGCGGTGAGGGCTGCCCGTGCGGCCTGGAACTCGGGGTTCGGCACGGTCGCCTCACGCTCGGCCTGTCCGGGGTTGGGTCCGTGCTGTTCGAGGTGCTGCTGTGTCTGGCGGTCGTGGCGGAGGAGTGCTGGCGGTGACCCGGTGGGCCTGGTCGGGGCGCCGCCGTCCTGCGGTCAGCCGTGCTGATGTGGTCACCGGCACGCTGGAGCC # Right flank : TACTTCGTGACCTGGGGTGTTGTCACGTGATCATGCTGTTTTCATTTACCTGCATCCGGCTGGGGCTCCGTCGGTCCGGTGCTCTGTTGGCCCGGGGCTGGGGTGGGGTTCAACGGTATCGGGCGGTGTGGTTGTTGTGGGGTGTCTGGTCGCCTTCCGGTGTCTGGAAGGCGACTTGCCCCGGCTCGGGGTGTGATGGAGTCGGCTGGGTCCGCTGTTGGTCCAGTGGGGCGGTGTCTGGGTGGGGATGCCTGCGTGGTGGTCTTCGAGGATGGCGTCGAGGACATGGTTTGTGGTGGTTCCGTAGAGGGCGACCGCTTGGTCGTGGCCTGCGTGGCGGGCGTAGGCGCGGACGAGTGCCGGGTCGGCCTCGGCATCGGCGCGTACGGTCGCCCGGTCCCACAGGTCCTCGGGCGCTCCTCGGCCATGGGGTTTTCGACGAGGGTGGGTCCGGCAGTCTGGTTCCCGCGGGCGGTGAATGCTGCTCGGGCGGCCTGGAA # Questionable array : NO Score: 5.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.59, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGACGACCCCCGCGCGGGCGGGGCGGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 4 1580663-1580452 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADANO010000003.1 Streptomyces clavuligerus strain K4567 unitig_1_quiver_arrow_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1580662 28 92.9 33 ....C........A.............. GTCCTCGCGCCGAAGGCGGGGAAGTGGGACGCC 1580601 28 100.0 33 ............................ GAGGGTGCGCAGGCGCTGGGCGGCTGCGCGGAG 1580540 28 100.0 33 ............................ AAAGAAGGGCCCCTCATCTCCGCCCCCTCTCGG 1580479 28 96.4 0 ......T..................... | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 GAACGACCCCCGCGCGGGCGGGGCGGAT # Left flank : CCGGTCGACGTCCCCGTTCCGCGTGAGGTACGACGCCGTGTTCTGCGGCGTGGTCCGGGCGTGCAGGGCATGGACGGCCCCGTCCCACGAGTATCTAGCGGCATCGCCGACCCAGGCGAGTACCGTGTCCTCCCCCTCCTCCAGCACGGCCAGGACGGCGGCCCCGGTCGGCTGCCCCGGGTCTGCGACCTGGCGCCCGGCGGCCGTCAGACCCGCGCGGGCGCCGTACAGGGCGCCGTATCGCACGGCGGTCCGCGCGCACAGCAGCCCGACCGTCGGCGCACCGGGCTCGTGCCCGGAGATATCGACAACACACAACCACCCCTCCGGCCGCCGGCCAGAAGACGGAGCGGCTGCCGGCACTGTTCCGTGGGTTGGTGCCCTGACGGCTGACCGCGACGACGATGACGGCCGTGGTGGTCATGGTCTCCCCTGGCGCCGGTGTGACCGCCGACCGTAGCCAGGGAGGTGTATGCACTCGACCCACAGTGTCATCGCGA # Right flank : ACTTCGTGACCTGGGGTGTTGTCACGTGATCATGCTGTTTTCATTTACCTGCATCTGGGGCTGGGGCTCCGTTGGTCCGCGGCGGGGGCTGGGTGTTCAACGGTATCGGGCGGTGTGGTGTCGTGGGGTTGTCTGGGTCGGTTCTGGTGTCCGGAAGGCGGCTTGCCCCGGCTCGACTCGATCGGGGTGTGGTGGAGTCGGCCGGGTCCGCTGCCGGTTCAGTGGAACCCCGCCTGGTGGGGGATGTCTGCCCGGTGGTCTTCGAGGGCGGCGTGGAGGATGCGGGTGGCGGTGGTTCCGCAGAGGGCGACGGCCTGGTCGTGCCCGGCGAGCTGCGCGCAGCTGCGGACGAGTGCCGGATCGGCGTGGGCGTCGGCGCGTACGGCCGCCCGGTCCCACAGGTCCTCGGGCGCTTCCTCGACAGTCGGGTGCTCGACAAGATCGAGTCCGGCAGTCTGGCTTTTCGCGGGCGGTGAATGTTGCTCGGGCGGCCTGGAACT # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAACGACCCCCGCGCGGGCGGGGCGGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 5 1587547-1587397 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADANO010000003.1 Streptomyces clavuligerus strain K4567 unitig_1_quiver_arrow_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1587546 28 85.7 33 .AGT..C..................... TCGGGCATCCGTCCTCCTGTGGTGGCTCACCCC 1587485 28 100.0 33 ............................ CTACGCGTCCGATCCGAAGCAGTCCCCGATGTA 1587424 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 95.2 34 GGACGATCCCCGCGCGGGCGGGGCGGAT # Left flank : GTCAGCCCTTGAGCCACCTCCCCAGCTTCCGCGCTGCTCGGACCAGTAGGTCTTCGATGCGCTGCCGCAAGGTCGGTTTGGGCTTTCCGCGACGCCCCATGGGCGCCTCCCCTCAGAACAGTCACCAGTGGTTCCCGGCTGGTGACCTTCTTTTGGGTTCGGGCCGGCCCCGAGGGCGGGGGCCCGGACGCGAATCGTTGAGGGGAGGCGCCACGAAGCGCACCGGTACTCTACCCCCGGCGCCCAGTCGTACGGTCCGTTCCGTCAACTCCCGTACACGAACGTGCTACTTCCGCAGCCCCGGCCCGCCAGGCCGGTGCCGGAACAGACCCCGGGACCGAGCCACTCCCGCTCAGTGAAACCCCGCCCGGGGAAGACGCGAGGTCGTCCTCGAGAGCAACCTGGGTGATGCGTTCGGCGGTGGTTCCGCAGAGAGTGATGGCCGCATCATGTCTGGCGACTCGTGCATGGCTCCGGACGAGAGCCGGATCGCCGCTGCC # Right flank : ACTTCGTGACCTGGGGCGTTGTCACGTGATCATGCTGTTTTCGTTTACCTGCATTCGGCTGGGGCTCCGTTGGTCCGGTGATCTGTTGGCCCGGGGCTGGGCTGGGCGGGGGCTGGGTGTTCAACGGTATCGGGCGGTGTGGTCGTCGTGGGGTTGTCTGGGTCGATTCCGGTGTCCGGAAGGCGACTTGCCCCGGCTCGGGCTGCGGTGGAGTCGGCCGGGTCCGCTGCCGGTTCAGTGGAACCCCGCCTGGCCGGGGATGCCTGCCCGGTGGTCTTCGAGGGCGGCGTGGAGGATGCGAGCGGCTCGGGTTCCGTAGAGAGCGACCGCCTGGTCGTGGCCCGCGTGGCGGGCGTAGGCGAGGACGAGGCCAGGGTCGGTCTCGGCGTCGGCGCGCACGGCCGCCCGGTCCCAGGCGTCCTCGGGCGCGGTGTCGACGGTGGGGTATTCGACGAGGTCGAGGTCAGTGTTCTGGTTTTCGCGGGCGGTGAGGGCTGCCC # Questionable array : NO Score: 5.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGACGATCCCCGCGCGGGCGGGGCGGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //