Array 1 126986-126599 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLVU01000004.1 Pseudomonas cichorii strain MAFF 302698 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 126985 28 100.0 32 ............................ ACAAGATCCTGACCATCGACGGGAACGTGGTT 126925 28 100.0 32 ............................ AGAGTGGGACGGGTTCAGCTCGATTGCTGACA 126865 28 100.0 32 ............................ AACACCCTGGCCAGGTTCAATACGCTGCTGCC 126805 28 96.4 32 ..........T................. GGCTCACGCCACACACTGGTGCCCAGGCAATG 126745 28 100.0 32 ............................ AAGACCCGGCACGCTCTTTGCCGGGGCTTGGT 126685 28 96.4 32 ............A............... CCTTGCACGCGGCCTGGCTCTGGATAGTCCGG 126625 27 89.3 0 ...........CA...........-... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 97.4 32 CTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : TCTGGTCAGTGAGTCCGGCGTGTTTGCAATGCTGGTTCATCATTACATCCCCGAGAATCGCGCCCTGCGTCACTGGCTGACCCATGACGTATTGCCGATTCTGCATCAGCAGCACGCTGTCACGGGCGATCAGCCTTGCCTGAATCAGATGCAATGGTTCGGCAACGCCCTGAGCGTGTTGCAATGGCGCAGTGAGTCGTGGATTCGGTTTCGGGACATGCCCCATGTGGTGATGGAAGTGCCTCCCCAGCCCAGACGAGGAATATGGCGCAAACTGCTGGAAGCCTTGAGCGGCAAGCGGCTGGTGATGTGAAAGGCGATTGACCTTCGTGCCCGGCAGGCTTTTGGCAAAGACCTGCCGGGTTCTGACCCTCTTTATTTCAGCCCCCTCCAGGCCCTTTTAAAATCAATGACTTATAAAAGCCTCGAAAAAAAGGGTAAAACAGCGCTCTGGCCATGTTTTTGCTTTTAAAACGAGGGGTTATTGGGCAGAGTGTCTA # Right flank : ACCGAATTGCTCCAGAACCTGAAATTCCCCCCCCACTCTTTTCCCCCTCCCTATATAACCCTCCGGAACCGAACAGGTAAGATAACGCTCATATGGTTCACTGATGTGGCCGAGCGTAGAGGACGTGTGCGTGAGCGATAGTAAAGTCCGGGTGGACAATCTGGTAACGGGTGATATCTCTCATCCACAAAAAGACATCTTTTTCGCAGCCGTCGAAACCACCCGGATGCCGATGATCTTCACGGACCCCAACCGTGAAGATAATCCGATCATCTTCGCCAACCATGCCTTTCTCGAGATGACGGGGTATGAAAGCCATGAGATTGTGGGCCGCAATTGCCGTTTTCTGCAGGGCCCCGATACGGATCGCGAAGTGGTCGCCGCCTTGCGCAAGGCCATCGAGAACCGGGAAGACATCGCCACCGAAATCCTGAACTACAAGAAGGACGGCTCGTCGTTCTGGAACGCGCTGTTCATGTCGCCGGTGTTCAATGACAACG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //