Array 1 5752-5225 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMIG010000127.1 Pelistega indica isolate MGYG-HGUT-02358, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 5751 35 100.0 35 ................................... GTTGGGAGTTCATTAAAGGTAAGCAGCTCTATTAG 5681 35 100.0 34 ................................... TCAAATATACAGGTGTCATCAGCACCAGCGCGGT 5612 35 100.0 36 ................................... AACGGGCTACCATATAATATTTTACAAAGGTTTCCC 5541 35 100.0 35 ................................... CTAACCTTTTCTCCAAAGGAGAAGCTAGCATAAAT 5471 35 100.0 37 ................................... CGAGAAAGCTGGTATGGAATCTGTCAGGTAGGCAGTT 5399 35 100.0 35 ................................... ATAGGAATGCGTCTACGAGTCGTGCAATGCTCGTT 5329 35 100.0 35 ................................... TCTTGAAGCTGGGCGATTTTCGCTTCAGCGTTTAG 5259 35 91.4 0 ................................ATA | ========== ====== ====== ====== =================================== ===================================== ================== 8 35 98.9 35 ATTAAGAAAAGCCCCGATGGTTAGGGGATTAAGAC # Left flank : GCTTTTCTAACTTGGCTCTCA # Right flank : AATCTAATGCTACTGAGATACTTTATGGTTTTTTGGAACAACGGTATCAAGAATTAATATCAAGACAATAATAATTAATTTTGATAAAATGGATAATATAGTGTCTAAAATAATATTTTAATAAGAAAAATGGATAATATAATATCTAATTTTAATTTGCTGGATAATCGTGATACACAGAATAACCTCGTTGCTTATTTACGGCAAAAACGTAAAGAGATGAAACTATCTCGTGAGGCATTGGCTCTGCGTAGTGGTGTTCCTGCGCCCACAATTAAGCGTTTTGAAGCAACATCAGAAATCTCTTTACGTCAATTTCTACAGCTATGGTTGGTGCTTGATGATATTCAACGACTTAATATATTATGTCAGCAGACAAAAGAAAAAATAATTGCACCTAAAAGCATCGAAGAGGTGTTAAATGACAAATTTTAATCCTACACGTCAGCTAGCAGTTTACCGAACATTGAGTACTGGTCAAAAAGTATTGGTAGGTGAGC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAGAAAAGCCCCGATGGTTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 2411-48 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMIG010000123.1 Pelistega indica isolate MGYG-HGUT-02358, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2410 36 100.0 34 .................................... AACATTCTAGCTTGCAACTCTTGCAGTTGCTGGT 2340 36 100.0 35 .................................... CCCTCACTGCCAGCCTTATTCATGAAGACGGGTTT 2269 36 100.0 35 .................................... CTCCCCACGGGCTAGGATACAATAGATATCACTAT 2198 36 100.0 35 .................................... CTGCATTGCGCTGTTAAAGAGCATTTTGCTACATG 2127 36 100.0 32 .................................... TCTGCAGACTGGCGCCCGTCTGCATACTCTAC 2059 36 100.0 36 .................................... GAAGTTTTTGGGGCTGTTTCCACATTTCGCCGTTAG 1987 36 100.0 35 .................................... GCTTGATTATTTTCAAATTTTTGAGTTTTTACAGA 1916 36 100.0 35 .................................... ACTGCTAACTTCAGATAAAGCTAGAAGTTCGATTT 1845 36 100.0 34 .................................... TAATATATTATATTATAATATAATAGGGTTAGAA 1775 36 100.0 35 .................................... GGAGTAGCTATGGCTAGTTTTACAATATAATCCCA 1704 36 100.0 32 .................................... CGCTAGCCAGTGCGTGAATTTGTTGTTTTTCC 1636 36 100.0 35 .................................... TGCGTCTTCCCGCGCGAGAGAGGGTACAAACCCAA 1565 36 100.0 36 .................................... CCATTTTTCGACGCGCATTTAATGCGTGTTTTTTCG 1493 36 100.0 36 .................................... CTACTTAAAAGACAAGTTAAACGTACTGCTGTTTAA 1421 36 100.0 34 .................................... GACCAACTGCTTATGGTAGTTTTCGGGCAAGTCC 1351 36 100.0 35 .................................... GTAGCTGCTAACACTGCGCCGCATCGCGCTGTTAA 1280 36 100.0 35 .................................... GGCGCCATGCTTCACCGTTATTCGTTGGTGTAGCG 1209 36 100.0 34 .................................... TAATAGCCGCCTCTGACTTGTTGGGGTTTACGGG 1139 36 100.0 33 .................................... AGCTGGGCGTTAGCGTTATAGGACGATACCTCG 1070 36 100.0 35 .................................... TGACACGGGCGACGATTAGGGTGACTAAAGTATGC 999 36 100.0 31 .................................... CCTCTTTAACCTCGACGTAAAAATCTATGTC 932 36 100.0 35 .................................... CGATTAACTGCTTACGGTGTTTTTCGGGTAAATCC 861 36 100.0 33 .................................... TTTTACGGTTTCCGTTGCTTTCCTCTTCATCTT 792 36 100.0 37 .................................... CTTAAGCCTACATCTTGCATCACGATTTTAAAGAGCA 719 36 100.0 35 .................................... ATATATGGCGTGCATGCTTACTTCATCGCTTGCAA 648 36 100.0 38 .................................... AATAGACAAGTCAAACTATACTACTGTTTGACTTTGAG 574 36 100.0 34 .................................... GCTACGTGCTGAGTCAAGTTGATTATCTCCATGG 504 36 100.0 35 .................................... TTGGCAAAATTATGGCGTTTTTTCGCTAATGTACT 433 36 100.0 31 .................................... AGTCTAATATTAGGTTTTCGATCTCTTTCTC 366 36 100.0 34 .................................... TTGCTAGCTTTTCTGTTTACTAGCTTTTTTTGCA 296 36 94.4 34 .A..................G............... TTCAGTTAAAACTTCTAAATTTTTTTGCGTATTT 226 36 94.4 36 .A..................G............... TGCTAGCTTTTCTGTTTACTAGCTTGCTTTGCAAGC 154 36 91.7 35 TA..................G............... TAGAGGGTTGACGCCATTGTTCGCCGTTAGCCATA 83 36 91.7 0 GA..................G............... | ========== ====== ====== ====== ==================================== ====================================== ================== 34 36 99.2 35 ATTTAAGAAAAGCCCCGATGATTAGGGGATTAAGAC # Left flank : CATTGCCGCAAGCGTATTCTTCACATGTATTGCTCACCATCAAAACACCGATGAGAATACAAAGCCAAGGATCAGGATTAGGGGTTGAAAAAATCACTGCTCGTCATTTATTAATACAAGTATTGAGACGTGTGCAAACAATATCGTCTTTGTATATGCAAGTCAATTTTGAGCTGAATCAGGATACATTGCAACAAATTGACAATGTTCAATCTGAATGCCATTTGAAGTGGCAAGACTGGAAACGTTATTCCAATCGTCAACAAAGAGAAATGATATTGGGTGGTATAATAGGCGAGTGGGAGCTATTGAATATACCCGTTGAATTTAGTCAATTATTGTATATAGGGCAATGGTTGCATATAGGCAAACAAACAGTCTTCGGACATGGTCGGTATGTATTGCAAGAAGTAAAAAAATGATTAACTTTGTAATAAACAAAAAAATTGGAAAACAGTATTTTAATTTATTGAAAAATAAAGAAAAATAGAGTAGTTGCT # Right flank : CACTATGAATATTCAGCTATACAGCTGAGTGAGGTAGATTAAGAAAAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAGAAAAGCCCCGATGATTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //