Array 1 30048-33383 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWGW01000018.1 Bhargavaea beijingensis strain M6-11 18846_M6-11_1__paired__trimmed__paired__contig_18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================================================================================== ================== 30048 33 100.0 36 ................................. CGCCCACATGGGTCATGTTATCCGGCACACCTATGG 30117 33 100.0 34 ................................. ACGATACATCGCAACAAAGTGTGATGAATCGCAG 30184 33 100.0 34 ................................. GATAGGTGTAGCGTGTTTAGCTCGCTGATAACGC 30251 33 100.0 33 ................................. TGCAACGCGCGGAGACAGCGGCTGCGGACGCCG 30317 33 100.0 34 ................................. GGTACAGCGCCCTCGCGCCGTTATTGCGAACAAC 30384 33 100.0 34 ................................. AACCATGATGAAGGATCAACGTACGCCTGCATCT 30451 33 100.0 35 ................................. CGGCTCTGAGGAAAGCAAGCTGCAAATGAGACCGT 30519 33 100.0 34 ................................. ACCTATCGTGAAAAGGATTCCCTTTGGTTTGATG 30586 33 100.0 36 ................................. TATTCTCGACCGCCACCCGCTCGGCATCCGCCGCCG 30655 33 100.0 34 ................................. TTGAAATCATCGAAATCCTTGCGCAGTTTTTCTA 30722 33 100.0 34 ................................. CTTTGCGGGAGGGGAACGCAGGGCTATCGTCAGG 30789 33 100.0 33 ................................. ACGAAGATGGTAGAGTGCGTGTCGCAAGGCGGT 30855 33 100.0 33 ................................. TGGTGGAATGCACAGCCGAACAATATCCCCCTC 30921 33 100.0 34 ................................. ACATCACCCAGACCGTCACCGTTCAGTCGGATCG 30988 33 100.0 34 ................................. CGTGCGTCTGCCCGCTTCTGCCCTCGCGGAGTCG 31055 33 100.0 34 ................................. CCTGGAGTGTTTGGTCATGAGGAAACCATCCGCG 31122 33 100.0 34 ................................. GCAAATGTCCTCCCAATTGTCATCAAGGTTAACC 31189 33 100.0 35 ................................. TTTGCAGGTCACGATCAGGTAGATGCAAGGCTAGC 31257 33 100.0 33 ................................. TGGACATTCAACAATATCCAAGATTTGAACGGG 31323 33 100.0 33 ................................. TGAATACCGGCATCACCTTTCGCACACCCGGAC 31389 33 100.0 33 ................................. CAAGCGGAAAAATTAAAACGCCGACTGGAAAAC 31455 33 100.0 36 ................................. GGTAAATGGACGGGACAATCCTACGCGAAGGATATC 31524 33 100.0 34 ................................. ATTGCGCAAGTAGGCGAGCAACCGCACAAATCCG 31591 33 100.0 35 ................................. ACTAATGCGTCCTGCCACATTAAAGTACGAGCGTG 31659 33 100.0 38 ................................. TCGTCTGTGTCCGCAATGCCCGTTGAGAGCGTGTCAGC 31730 33 97.0 35 ............G.................... AGCCTCGGCACACGAACGAGTGAGCGACAGACACC 31798 33 97.0 34 ............G.................... ACGCTTTCATAGGTTGGTTTACCGAACCACTCCC 31865 33 97.0 34 ............G.................... CAGTGGTGAAAAGCGTACAGGCTACCCAGGCGTT 31932 33 97.0 34 ............G.................... CATTGGGAGATGTCGGGCTGAAAATCGTTAACTC 31999 33 97.0 35 ............G.................... GTGACCGTCGCCTGCGCGCGGTACTCGTTGCCCGC 32067 33 97.0 35 ............G.................... ATCTTCCACACTGCGAATGCTCCTGAGAGCCGGTG 32135 33 93.9 35 ........T...G.................... TTCGTCCTTTTGAATATGCGGTACAGTCTCTTGAA 32203 33 97.0 34 ............G.................... CTCATATGCCGATAGTGCTTCTGGCAATAAAATC 32270 33 97.0 35 ............G.................... GCCGGTAATCGGATCGGGCGTGCCTGCGCCCTCAT 32338 33 97.0 34 ............G.................... TTCTCCCACGCTGGCAATCCAGCAGCTATTCCTC 32405 33 97.0 35 ............G.................... CGTTGCTATCAGGAAAAGCAGGCAGATTTGTTTTC 32473 33 97.0 34 ............G.................... ACGTTTCCGACGTTGTCGACGACAAACTGCCCGT 32540 33 97.0 35 ............G.................... AACAGCAGCCCGATTGACTTTGCCATACTGGCGAC 32608 33 97.0 35 ............G.................... GCCGGTAATCGGATCGGGCGTGCCTGCGCCCTCAT 32676 33 97.0 35 ............G.................... TGTCTTAGTGGATCCGGTAAGTCCGGACATGCGGG 32744 33 97.0 36 ............G.................... GTCAGCGTAAACGCCTTGCCCGCGTTGACTGCGCCG 32813 33 97.0 36 ............G.................... GATCGATCCGCAGGACAGGAAGGGCGAGGTCCGCCT 32882 33 97.0 36 ............G.................... TATTCATGGTATTCAACGAAAGAGGGGATTTCCCTC 32951 33 97.0 35 ............G.................... CTTTAGCGCACGAGCGGTCTCCTTTGCGGTCCTTT 33019 33 100.0 33 ................................. GCCGTGTACTGCGTGATGTCCGTCTTATTTTCG 33085 33 100.0 34 ................................. TGTCCGTCGTGTCCGATCATGACTACGGTCACGT 33152 33 100.0 33 ................................. GCGACAACGGACGGCGCGCCGGCGGAACACTGG 33218 32 97.0 101 ...............-................. CCGCGCGCTGTCACGGCTTGTAACTCGTTGTTCTGTGGCCCCCCTGAATGGGGAGCGTTGGCGAAGTCGCATAAGGCGGCAACATGTCCGGAGTGCTTGCA 33351 33 69.7 0 .G...T.AT..C..C.T..ATC........... | ========== ====== ====== ====== ================================= ===================================================================================================== ================== 49 33 98.1 36 GTCGCCCCCTGTATTGGGGGCGTGGATTGAAAT # Left flank : GTGGAGATCTGGATGCATATCCGCCCATTTTAATCAGGTAGGTGATAAGTGTGCTGGTTCTTGTAACTTACGATGTCCAGACGACCACAGAGAGCGGCAAAAAGCGCCTCCGCCGAGTCGCAAAGAAATGTGAAGAATACGGCATCCGGGTCCAAAATTCCGTCTTTGAATGCATCGTAGACAGTACCCAACTGCGCTTGCTGGAAATCGCATTGGAGGAAATCATCGACCCAGCGACCGATAGTCTTCGCTTTTATCGATTAGGAAACAATCATGAAACCAAAGTGAAACACCTGGGAGCGAAACCTGCGCTTAAGGTGGACCAGCCACTTATATTCTGAAAGGCGAACCCTAAGTGAACATGAAATCACCGGCAGGTTCGCGTAAAATATGAGAGAAAAACGGTCGTTTTCTGATTGGGATTAGGTAATTTCGAGTGCAAACAGTTCTTGTATGACAAGATGTAGACGGAGTTGGACTTGAAATGTCTACATTTTGCG # Right flank : TTCATTAGCGAAAATAGTATGTATAAAGGAAGAGAACAGGGACAAACTAATGAAAAAATATTGTCTACATTGAGAAAGTTGAGGTGTGCCATTTGAAACAAGTCTGTTTTTACATGTGCAACCCAACGTTCTCGCAAGAGCGAAATCCCTTAATTTCATTCGGAAAATGAATATTTGATGTCTTTCGTAAAGACTGTGGCATATCTGTTGACTTAACCGCAGGTCTATATAATAATGAATATGTGATTAGAATAATTATAGTTAAGTAGGGCAAGCTGAAATTCGTGAGGCCTGAACGACTATAAACACATCTAAAACAGGAGGAATATAACTATGTCTCTCATCGGCAAAACAATCGAACCATTCAAAGCAAGCGCGTACCATGCGGGTACTGGCGAATTCATCGAGGTAACAGACGAAAGCATGAAGGGTAAATGGAGCGTCGTTTGCTTCTATCCGGCTGACTTCACATTCGTATGCCCGACTGAACTGAGCGACCT # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:-0.10, 8:1, 9:0.90, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTGTATTGGGGGCGTGGATTGAAAT # Alternate repeat : GTCGCCCCCTGTGTTGGGGGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA //