Array 1 102906-109531 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHGW01000008.1 Acinetobacter baumannii strain MRSN15049 MRSN15049_contig00008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 102906 30 100.0 30 .............................. GTGAATAAGATATAGACTTATCTTTATCCA 102966 30 96.7 30 ............................A. TAAGGGATAGTTTGCTCATGCATGACAGTA 103026 30 93.3 30 ............................GC TTTTTGCTCTCTTACAGTGGTTCTTATAAA 103086 30 93.3 30 ............................AA CACCCACCATTGTTTCGGCTTAAAGAAGTC 103146 30 93.3 30 ............................CA ATTGAGCCATGCTTAGCAATTGATTTTTTA 103206 30 93.3 30 ............................AG ACAAATCTTGAACGGCAAAACCTTCCGGAA 103266 30 96.7 30 .............................A GACATGACCACGTAAAAGCAAACGGAACCA 103326 30 93.3 30 ............................AC AAAATGCAACTATGCAAGCTGGATTTCCGC 103386 30 93.3 30 ............................GG CCAAAAGAAGGGGAAGAGTGTTGTTACATA 103446 30 96.7 30 .............................C TTTGCTCTCAGCCTCATTATTTACACGAAT 103506 30 93.3 30 ............................AA ATTGATTGACAATGCCCCATGTTTTGCCAA 103566 30 93.3 30 ............................AG ACGGCACCAGCGTTGCTACTGTGGCTTATA 103626 30 96.7 30 .............................A AAAAGCCTAGTGATTTTAGAAATTTTTCAA 103686 30 96.7 30 .............................A ATGGTTTTTGCATCATATGGAACTGGTACG 103746 30 93.3 30 ............................AC TAAAGAAGTTAGAGTCAAAAACCAAACCAC 103806 30 93.3 30 ............................GC CACAGCATAAGCAATACTTCGCGCTGAATG 103866 30 96.7 30 ............................A. CCATAGCAATTTCAGACCGCATAGGCTTAA 103926 30 96.7 30 ............................A. GACAGGACATGACAAGGAGGCGGTATGAAA 103986 30 93.3 30 ............................AA TTAAATCCAATTTCCCTAAATCCTTGAACA 104046 30 100.0 30 .............................. ACTACCGAATACAAGGTGGAAAGAATGCAG 104106 30 93.3 30 ............................AA GTAAGCTGAACGTAGCCGCGACCATAATAT 104166 30 93.3 30 ............................AG ATCAATACACCATTGTCAGGTCTTGATACA 104226 30 100.0 30 .............................. GTTGAGCACCAAACCACGAAATATCAACAT 104286 30 93.3 30 ............................AA CCGCGCCAGATTTAGCAACAGTAAAGTTTG 104346 30 96.7 30 ............................G. TCAGGGTTGTATCTGTTAGGATATGAGTAA 104406 30 96.7 30 .............................A AGCTTTTTTTTGATTACTGGTAGTTTAATG 104466 30 100.0 30 .............................. TTGGAGCCTTGCCGCCATCTTCGATTTTTG 104526 30 93.3 30 ............................GC AACCGTTGGTTTTAAGTTAGACCTAATGGT 104586 30 93.3 30 ............................AC AAATGCATAACAGTATCGGTAGCTAATTGA 104646 30 100.0 30 .............................. GACTGTAAATTGCCCTGCTGGAGCAGTATT 104706 30 96.7 31 .............................C ATGTTCTTGAATTGGAGCGCAGACGAGATCA 104767 30 96.7 30 ............................A. TAATGGTCTTGACCGTGTTTACAACGAAGA 104827 30 96.7 30 ............................A. ATACACGCCAATCTTGATTGACAACATCAC 104887 30 93.3 30 ............................CC GTACATGTTGACGTAATCATGTTCATCCTT 104947 30 93.3 30 ............................AC GAATTCCTTTTGCGCATGGCGCATACCAAG 105007 30 100.0 30 .............................. GTGCCTCTTTGGTCAACTGTGACAAGCCAA 105067 30 100.0 30 .............................. AAACCCATACGCTCCAGACAACATTACAAG 105127 30 93.3 30 ............................GA CATGAGTGGGAATATGAGGAAGGTAATTTA 105187 30 100.0 30 .............................. TTAGCTCATTGCTGCGTTGCTCCAATTTAA 105247 30 100.0 30 .............................. CAGAAATCTTTTGTTGAGTGATTGGCGGAA 105307 30 93.3 30 ............................AG AGTCACAAATTTATTTAGGCAAGAAAAATA 105367 30 93.3 30 ............................AC CAAGCCCATTATTCGGGTTTACCGTATTGT 105427 30 96.7 30 ............................A. GCAGAATTAACCCACACAAATCAGCAATAA 105487 30 96.7 30 ............................A. GACAATGATAGCCATAAGACTATGCAATAG 105547 30 96.7 30 ............................A. CAACTTCCAAAGTCAAACCATTAGGAAGTC 105607 30 93.3 30 ............................CC AAAAGGGATTAAGTTCACAAAAGATTTGGC 105667 30 100.0 30 .............................. TTTCAGCCGCCTTCAACATGGCTTCAGCTT 105727 30 96.7 30 ............................A. GCCAAGCGAGATAAGGAAAAGCAAGATAAA 105787 30 93.3 30 ............................CA TCCTTAAATACTGAGATCTTTTTTGATCTT 105847 30 96.7 30 .............................C TGCACGTAGCCTTGCAACGCCCGATTCAAC 105907 30 96.7 30 ............................A. TGTGTTGTCTAAAACAGTCTCACCCTCATT 105967 30 93.3 30 ............................AA TGACATTTATTGAGTGGTGTTCTAGTGGCG 106027 30 96.7 30 .............................C TCGGCACAGGAGTGCATTCGAAGTTGATGA 106087 30 96.7 30 .............................G AATGGGTATTAGAACTCAGTGAAGATATGT 106147 30 96.7 30 .............................A CTGGCTCAGGCAGAGAAGGCATGTCAATGC 106207 30 93.3 30 ............................CA CTTGGGCATGTTCTTAGATCCAGACACAAA 106267 30 96.7 30 .............................C TACCTGCTAATAGCTTCTTTGCCCTAGTTC 106327 30 100.0 30 .............................. GCTTAACCTTCACGCCATTTGGATAAACTG 106387 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 106447 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 106507 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 106567 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 106627 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 106687 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 106747 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 106807 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 106867 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 106927 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 106987 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 107047 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 107107 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 107167 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 107227 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 107287 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 107347 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 107407 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 107467 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 107527 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 107587 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 107647 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 107707 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 107767 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 107827 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 107887 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 107947 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 108007 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 108067 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 108127 30 93.3 23 ............................AA CAATTGCCTGAGAGCCACCAGTA Deletion [108180] 108180 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 108240 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 108300 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 108360 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 108420 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 108480 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 108541 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 108601 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 108661 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 108721 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 108781 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 108841 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 108901 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 108961 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 109022 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 109082 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 109142 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 109202 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 109262 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 109322 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 109382 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 109442 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 109502 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 111 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.27, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //