Array 1 30411-29102 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOXP01000004.1 Sphingomonas rubra strain CGMCC 1.9113, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 30410 29 96.6 32 .................A........... CTCCCGAAAGGCATCCAAGTGTCTGACTTCTC 30349 29 100.0 32 ............................. TGCGCGGTGACTTGGTCGGTGCGGTCCTTCGC 30288 29 100.0 32 ............................. GCCGTCCAGAAGCGCTACCATCCGCTGCCGGG 30227 29 100.0 32 ............................. GCGGATGCGCTGCCCGGTGCCCGCCAGCGTGG 30166 29 100.0 32 ............................. GGGCCAGGTTCTCGGCGGACTGGGCCTAACGT 30105 29 100.0 32 ............................. GACACCGGCGAGGTGGTCAACGACAACGAGCC 30044 29 100.0 32 ............................. TTCGGCGCTTCGCCGTTCGTCAAGACGCCAAG 29983 29 100.0 32 ............................. CCGTTCACCGTCGCGATCAGCCACAGCATCGG 29922 29 100.0 32 ............................. TTCGCCGGCGGGGGCGGGGCCTTCACCGGATT 29861 29 100.0 32 ............................. CAGGCGGACCTATGGCTGCCGATCGCACCAGA 29800 29 100.0 32 ............................. GGCGTTGTCACCGCGGAAGACGAGCGCCTCTA 29739 29 100.0 32 ............................. AGCGCCGACCCGAAAAGCCCGTTCGGGCCCGA 29678 29 100.0 32 ............................. CCTGTTTCGGCAACGGGTTGGCGTCGGTGACC 29617 29 100.0 32 ............................. GACCTCGTCCAGCATGAGCTGGTTGAAGACGC 29556 29 100.0 32 ............................. TGATCAGATCGGGGCAGGGATCGCGCACCTCG 29495 29 96.6 32 ............................G CACGCTTGAGGTGCCCGTATTTCCCTGGGTTT 29434 29 100.0 32 ............................. TTCACCGACATGGCGAACCGCTGCCAGCGGAT 29373 29 100.0 32 ............................. TCGATCGTGATGCCGTCCGCTCGGTCGCGCGC 29312 29 100.0 32 ............................. GATATGCGCCTCGATCGACCTCGCGCCCGTCT 29251 29 96.6 32 ....T........................ ACCGGTCGCTCGGCCGGCGCCGTCCCGCTCAA 29190 29 100.0 32 ............................. GCACCGTGGTACTCCTCATGAACTGGTAGCCC 29129 28 89.7 0 ...........-.....A........T.. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.1 32 GGCTCCCCCGCACCCGCGGGGATCAACCC # Left flank : CGGGCTGGTCTGCGCGCTCGAGCTGCTGCGCACCGGCGATGCCTATCGTGGCGACACCGGCCGCCCGCTGCTCGGCGACTGGCCGATCGAGATCGGGCTGTGGGTCGGCTCCGATGCCAGCCCCAATCGCCTGGGGCGCAAGGGCGACAAGACGGAAGGCACCGCCGTCAAACGCGTCCGCGCCTATACCAACGGTCGCGACGCCCGCGCAACCCCGCATGAGCGCGGGCGTGCGCGGCCGGATCTGGACGGTGGTGGAGGAATGGCACGGCCGATTACGCCGGGGCAGCATCGTGATGTGCTGGGCCGAACCCGCCTCCGCCGGGGGCCTCGGCCTGTCGGTGCTGGGCGAGCCGCCCAAGGACGTGATCGCGCACGAGAGCGTCCTACTCGTCCGCCGGGCCCTGCCCGCCCGGCATTCGCCGGAGCAGCGAGGCTGACTTCGGGGTTGCACGACGTTCTTTGACATTGTTAGTATAATCAGGACTCTAAACGGCAGA # Right flank : GAGGCAATTGTGAGACAACAAGACATTCTGGAGTGCCGTTGTAGATGTTTGATCCGGGCCCTGATGGTGCATCAGTTCCCGGAACGAATAGAAGGATCGCCATGGATCAGGTAGCCATGAAAGCGCCTGAAAGACCGAAGCAGTCCGCCGAGCGATACAGCACAGCAAGATAACCAGAGGGCGCTAATAAAGCGCTACGGGCGGCAACCAGAAGAAGGTAGCCAAGTGGAGGAAGCGCCGCGCAACGTTCGGTCTGCCCACGGCTCCGGAGGGCCCAAGACCAACCTTGTCGTCGATTAAGTAGGAGGCGGCAGTGGTCGCGTGCCGGCGTCATATGCCGCTGTCGCTAAACAACTGCCCCCACACGCTATTAATTTCTGGGAAAATAGTGCTCGCACAACGATAAACATCAAGACGCGATCTTACGTGTTACAATAAGTTCAACCTGCGAGAAACGGCAGGCCTCCTGCAACCTACTCGAGGCGCGATCGGTAACCAGC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATCAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //