Array 1 105775-102315 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMYC010000006.1 Bifidobacterium adolescentis strain 1001095IJ_161003_D1 NODE_6_length_116702_cov_24.3866, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================================================================================================= ================== 105774 29 100.0 32 ............................. TATGCAGCCAAACCGATGGCCGAGATCACCTC 105713 29 100.0 32 ............................. TGTAGTATGCGCGGATGTTGGTTTCGCGGCCA 105652 29 100.0 32 ............................. CGACGAAAGGATTTGATTGGAATGAATGACAG 105591 29 100.0 32 ............................. CCATGAATCTTGCCAGTTTCGATAGCGCCCGT 105530 29 100.0 32 ............................. ACACTCCATCAAACACGAAAAAAGGCGCGTTA 105469 29 100.0 32 ............................. GTGTGATTCACGGCACTCCACTGAGTTACGGT 105408 29 100.0 32 ............................. CAGTCAAACCAAGCGTACTCAAGTCAAACGAG 105347 29 96.6 33 ...............A............. TGTTAAAACCACGACGGCGGGGCTACTCGAAGG 105285 29 100.0 32 ............................. GTAGTGGGTGTGTGCCTAATTCGTTCGCTAAT 105224 29 100.0 32 ............................. GTACTTGCGTACGGTCACGTCGTCGTATCCGG 105163 29 100.0 32 ............................. AGAATCGGGACAAACACCAGAACACCAGAACA 105102 29 100.0 32 ............................. GGCGGCATGAAGGACAACCACTGGCCGGCCGA 105041 29 100.0 33 ............................. GCCCTCTACGACGGCGTGCAGGTGTGGCCGCCA 104979 29 100.0 32 ............................. TGCTTGTCGGTGCCGTCCGTGACGAGCATTTC 104918 29 100.0 32 ............................. TTGCCTATTCGAACCTTGTATTGTCGGATTCC 104857 29 100.0 32 ............................. TTGTCGAGCAGGTTGCCGTTCTGATCGAACAC 104796 29 100.0 32 ............................. ACGATCATCAGCCTGATCTACGGCGACAAGGA 104735 29 100.0 32 ............................. GGCAACGTGAGCCAGACGCAGACGCTGAAAGG 104674 29 100.0 32 ............................. CGATGCCGTCCTTGGATTCCGAACGCCCCTTT 104613 29 100.0 32 ............................. TGCAGGCCGCCGGAAAAAACGTGCAGGAGATA 104552 29 100.0 32 ............................. TCGTAGCTGACGGCCTCGCTGTGGTCGGTGTC 104491 29 100.0 32 ............................. AGAAGGAGCCCATCATGGCCACCACAGTCTAG 104430 29 100.0 32 ............................. CAGCCTCCTTGAGACAGTGGATCACCAGACTG 104369 29 100.0 32 ............................. ACCGGGTTCGACAGCAACGTCGAAACCGCTAT 104308 29 100.0 32 ............................. GACTTTGGAGACCACAGTCAATAATCTGACCA 104247 29 100.0 32 ............................. ACCGGCGCGACCAGCGCCCAATTGGACCAGCT 104186 29 100.0 32 ............................. CCGTGCGACGGCATCGAGACGCCACGCAAGAA 104125 29 100.0 32 ............................. AGCGTCAGGCAGCCGGTGTCGAAACCCTGCGC 104064 29 100.0 32 ............................. GCGAGGACATCGACTGGAAGGTCAGCGACCTG 104003 29 100.0 32 ............................. TACATCAACGTCGGCACCGACAGCGAACGGAA 103942 29 100.0 32 ............................. TTGTAGCTGATCGCCTTGACCTTGAGCGTGGT 103881 29 100.0 32 ............................. GAAGCGCGCCCGCCCTCAAGGCCGCCGCCGAC 103820 29 100.0 32 ............................. ACAGTCGGTTCAGGCGTGGCGAATGCGATTGG 103759 29 100.0 32 ............................. GTAACTTAACAACATGTTGCACATACAACAAT 103698 29 100.0 32 ............................. TCCAACGCCCTGGCCGCCATCGTATTCCTGAT 103637 29 100.0 32 ............................. TTTCCGGTCAGATCGGCCTTGGCCTGAGTCTT 103576 29 100.0 32 ............................. GTGTTCACGGCCGGTGGCGTGACCGACGGTGA 103515 29 100.0 32 ............................. GATTTGGAGGCGCGCGACCGTATCAACATCGC 103454 29 100.0 32 ............................. GCGTCAACCAGCGTATCCAAGCCCTGAACCAT 103393 29 100.0 32 ............................. TGGAAAGCGACAAGTACGCGGCCGACATGGAG 103332 29 100.0 32 ............................. AACTTCAAAATCGCGGACAAGAGCTTCACCGT 103271 29 100.0 32 ............................. ACTCGTGGACGTGTGGCTCAAACAGGTGGACT 103210 29 100.0 32 ............................. CGAGTACGAACACCGCACAGGATGTTCCGCTG 103149 29 100.0 32 ............................. CAAGGACGATTCTAAGGAGACGCATATGGCAG 103088 29 100.0 32 ............................. GCGAGAGTCCAGATATGGAACAATACGACGCA 103027 29 100.0 32 ............................. ATGCTGGCAGTCGAAGAACTCGCAAGCCAAGG 102966 29 96.6 32 ........T.................... GACCTTCGGACGGTACGTTCTGCTTGTCGAGC 102905 29 100.0 32 ............................. TGGGTGCCGGCTTCGGCTCCGATGGTGCCGTT 102844 29 100.0 32 ............................. CGACTGCCGGACATCGGTTTGATCTGGCATGA 102783 29 100.0 32 ............................. GTCTTACCGAGACCACGCGCACTGATAATGAA 102722 29 93.1 32 ...T.........G............... ACTTAAATTTGGACGTCAGGCGCCCAGATTGT 102661 29 89.7 167 ...T......T.....T............ CAACGGCACGAAACGCATATCCGCGAGCTATAGGTGCTCGACATATCGGGACTGCATCAGATCCAACTGAAATAGAAAACCCGAAGATAACCCCCCGACTGATGTTCCAGTCTTGAAAGCTGGTCGCGTGGGATCTTCGAGCAATCTAATTCTACCACCACGGCACC 102465 29 93.1 32 ...T...............A......... CACGACATGCAGGACTACCAGCCACTCGGCAG 102404 28 93.1 32 ...-.......G................. GCGCTCGAAAACAAGCTGCGCCAGCGTTTCAA T [102397] 102343 29 82.8 0 ...T.......G..............TGT | ========== ====== ====== ====== ============================= ======================================================================================================================================================================= ================== 55 29 99.0 35 GTGCTCCCCGCACATGCGGGGATGATCCC # Left flank : TTGGGCTTTGGGATGATAAGCAGGGCGAGGTTTCTGCAGGCAAGTCCTACTCGGATAATGACGAATGGGATGGTGGGACATGGTAGTGATTGTGCTGACTGCTTGTCCTGTGGGATTGCGGGGTGATCTCACTCGTTGGTTGCTTGAGATAGCCCCAGGAGTTTTTGTGGGACATATCGATGCTCGAATTCGAGATAGGTTATGGGAGAGAATCATTGATTTGCTCAGGGATGGTCGTGCCGTAATGGTTTATTCGGCCAGAAATGAGCAGCATATGGCTTTTAAGGTGTATGGGGCTGACTGGTCACCGGTCGATTGCGATGGATTGCAATTGATCAAACGTCCTAAGGAAGCAAAAGAAGGATCCTTTGTTGGCACTCCTAGAAAAGGATGGAGTAATGCGAGCAAATACCGAAAGGCAAGGAAATTTTCAAAACGAAACTGAATGAAAAACAGCCAGTTGTCCTTTCTTTTCCTTGGAATTATGCTATTTTCGAAGT # Right flank : ATTTGTCAATCTATCAGTCGCATCGCATGTGCGTTAGCTACACTTATCCGCATAAGTGTAGCTAACGTTAAAATAAGCTACATTTATCTCGATAGGTGTTGCTTACGAGAGTTTTTGCGATGGATAATTATTCAGCCATTTCGACATACAATGAATCCGTAGGGGCCACAACGACTTGTGTTTCCGATTTACAAGCGTGGCTTTGCTTAAGAACGTGATTTTGTCCGGGGAACGATGCGCTTGACACATACTGGCACTACCAACGGAGGAGCACCATGAAATACGAGATTACGATTTGCAAAAGTATGAAACGCAAGAAAGGACGCAGTCGCGCTTCGATATGTTTTTGATTGCGTAACGGCGCGACGGCATCGCTTTTGCGCATGTCGGGCGCTTCGTTGCCGCAACCGGCGTAAGATATCTGCGAATATCAAACATAAGCGAGATATCTGAAGGAGAGAAGATGTCAACAAACGAAGCAGCATTGCCGCAGTCGACGG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACATGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //