Array 1 14130-14342 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXJ01000024.1 Streptomyces sp. CB01580 scaffold24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 14130 30 100.0 31 .............................. TCGCACCATGATCAGTCGCCGTACGCTCCTT 14191 30 100.0 31 .............................. CGCCGCGCCGAGTTGCTGAGGCAGGCGAATG 14252 30 96.7 31 .............................A TCTCCCGCTCAAGTTCGGTGGTGTACATCTC 14313 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================== ================== 4 30 99.2 31 CTGCTCCCCGCGCACGCGGGGATGGTCCCG # Left flank : GCGCCGGCGCGAGCGCCGCTGCCGCCAGCACTTGGCGTCGTGATGTGAACGCCCGTGCACTCGTGTCGTGCTGTCGGTCTCCGGTCCTGTTGTCGGTCTTCACGTGATCGCCTCCATGGCGAGATGAAAACACGTGAAACTTGGATAAAAGAATGAAAGCGGATACATCGTCAGCGGGTCGGACCGGATGGCCCAATGGCCCCACCGGACGCCCTGTCGGGGCGCGGCGACGAACGCGTGTGGCGCCCTCGCAGGCGGGAGCTGTCACAGCTGACCGAAGCTCAGAAACGGGCTGAGCGGCAGCGGGTGGCCCTCGATAGGGCCGGTAGTCGCCGAGTAGTCTCGATGCGATACGCCCACTCTTCTCGGCAGCGGGTGCTTGCGGAGTGCTGGGGCGTGGTCGCGCCGGCTCGCCAGAAGGGTGTTTTGGCCTCAATGTCGCGATCCAGGGAAGTAGGTAAAAACGGCTACCCTGCCGCCTGAACCCGCAGGTCAGGAAC # Right flank : GGGCGCGTGCCTATGCGTTACGGCCCCGAGGACTTTTCCGTCGTCTGTTCACCGCATAGCAAAGGAGCCCCGCGCCGGGCCGTTCGGAGCTTTGGAGTCACGGACGGGGACCACGCCGCGCGGGGCGACGAGGTTGGCAGCGACCTCGATGCACTGGCCGCCGTTGGCGCTGCATGAAGACTTGAACCAGCGGCGGGATTGGGTCGCCACGGGGTGCCCTTTCGCAACCGGGTGATCACCGCTACGGATTCCGCTTGGGAGGAAGCTTCTGCCTGTAGCCCGTCGGCCGTGCCCCACCGGGCCGCGGCTCCTTCGGCGGCGGTGTGTGGCCCTCGCGGCCGTCGATGTTTCGCGGTGAAAACCGCAAGGTCAGGGGCCTCCTGCCGGTCGGGCCGTCGGACCGGCGGACCGGCGGGGCAGGGCTGGACAGGGCGGAGCAGTTGGAGTACGTGGGGCGGCGCCGCGTCCGGGGATGTGGGCGATGTGTGTGGAAGTTGAAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 15660-14350 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXJ01000002.1 Streptomyces sp. CB01580 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 15659 30 100.0 31 .............................. GGTCCCAGCCTCGCTCGATGACCAGGACGTG 15598 30 96.7 31 .............................C GGTCACCGGGGAGGTCTTCGCGACGCAGGTC 15537 30 96.7 31 .............................C CGGCCTTCGACCATCGGGGCTGTCGCGGGTG 15476 30 100.0 31 .............................. ACACCTACTTTCCCCGCACGCTCGTCAAGGA 15415 30 93.3 31 ............................GT CACCGCGAGCACCGCCCTGCCCTGTGTATTC 15354 30 96.7 31 .............................C GTCAGCGTGCTTATAGAAACGCTTTTCGTCC 15293 30 100.0 31 .............................. GGCGCGCGGCGACGGGCGCCGCCTGCTTCCC 15232 30 96.7 31 .............................C ATCGCTGCGATCACGGCCATGGTGACGGCGG 15171 30 86.7 31 ..........................GGTC ACGAGGCGGTTGGGCTTCTTCACTGCTGTGG 15110 30 100.0 31 .............................. GAGGGGAGTGATCACCCATGGGGTGGAAGTT 15049 30 96.7 31 .............................T GCTGCTCGGCCACGGCCGCCGCCTCAGCGCG 14988 30 96.7 31 .............................C GAGATCAACGCGTTCGCACGGGCCGTGCAGA 14927 30 96.7 31 .............................A TCGGCATGGACCGATGGGGAGAAGAGACGAA 14866 30 96.7 31 .............................C CAGATGCCGCCACGCTGCACAGGCCAAGCCT 14805 30 100.0 31 .............................. CCGCGGTGGTGCGTTCGTGGACGTCTGCTTC 14744 30 96.7 31 .............................A CCTTCTGCGCGCGCTGTTCCACCGGCGGCCC 14683 30 100.0 31 .............................. GTCCTCGGTCGCGGCCGAGACCCGGACGGGG 14622 30 96.7 31 .............................T GTTGCAGAGCAAGACCTGCCTGCCAACGCAG 14561 30 93.3 31 .......T.....................C ACGGTCGTCGCGGCCGCCGTCATCGGGGTGG 14500 30 100.0 31 .............................. CGATGGGACGCAGCGTGGCGAAGCCGACAGT 14439 30 96.7 31 .............................A CGCGGAGCTGTACGCCGCCCCCGTCGACCTG 14378 29 80.0 0 G...................C.A..-.G.A | ========== ====== ====== ====== ============================== =============================== ================== 22 30 96.2 31 ATGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CGGTGCTCGACCTCAACTTGCGTATGGTCATGTTTCCGTCTCCCCCGTCGCATGAATCCAGCCAGTACGGCCGTTTGTCAGATTAGAACGCGGCGGATCGCGCCGGGAAGTGGGGGCACGAGGCCCGCACCGGACACCACTCACGCGCCGGGCGGCACTGCGGGGATGACGAGAGGACGAGAGGCTCTTTCCAGGGCGAGAAGGCCCCGTCGGGCCGCCTCGGGCGTACACCGCGAGCAAGTGCGCGGGTAACTTCAATTACCGTTCGCCTCAAAGCCATTGGCCGAGGAAGACACGCAGCGGGAGAGGGGATGGGAGGGCGGACCGCTTGAGCCGACGCACTATCAGACAGCGACTACGCGCCGACAAGCTCCGCCGGAGAGGAACCGTCGCCGAGTAGTCTCCAAGCCACAGCGTTTCACGAAGCCGGAGATGTGCGCAGCGGCGGTACGCGACCACTCCGGCACACCGAAAAGGACACTTTGACTCGGGGATCAGGG # Right flank : AGTGCACCACCTATCAGCACCACCCCACCGCGGAGGAACTGATATGTGCGACAGCACCAACCATCGTTTCGAGCCGGGTCAGTGTGCAGGCTCGTGCCCCGTCTGCGGGGCAGGAGTAGGAGCACCGACCGGCCCACCACGATGCGCCAACGCGCCGGAAGCGGCACCGAAACGTGCCCGGGAAGCGGACAGCCCGCACTGTAGCTCCACAGAGCCGAGTCCCGGCCTGATGCACGGCTGCTGAACAGCCAGAACTCGCTTCCGCCCATGAGGATGCCCCTTCACCTACTCAAGTAGGACAGTGTCGCGCTGTAGCCGCTTCCCACGTACGCGTCGACGGTTGAATCCCATCGCCCCATGGCGTGTTCTTGCACGGTGAAGCCCCACCATGCGACGCACGATGGGGCAACCTCAAGCGGTACGCCAGCCGGACGGTCAGAACGCGCCGAACTCTTCAGCCCTGACACCCGCAACGAAGGACGCAAACGCACTGGCAGAGG # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 100736-101069 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXJ01000002.1 Streptomyces sp. CB01580 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 100736 29 100.0 32 ............................. GCCGCTGCCTGCCTCTCTTCGGGAATCTCGGT 100797 29 100.0 32 ............................. TTTGCAACCATAGTGAAGGGTAGTGAAGGGTT 100858 29 100.0 32 ............................. TGGGCCCAGTTACGGCCCGCGTCATCCTCCGA 100919 29 100.0 32 ............................. CCGCCCGACCCGGTCCCCGTCACCTGCCAGTC 100980 29 100.0 32 ............................. TCCACCGTCAGCTTCTTCTCCGGGCTGCCTGG 101041 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGCTCCCCGCGCGTGCGGGGATGGTCCC # Left flank : CTCCATGCCGCCCCTGTGCGTCGAGCACGCCCGCGTGTCCGTACGGCAGTGCCCGTTCCTCCGCCGTGCCGAGTACGCCGTACTGCGCGTACGCAAGCCCCAGCTCTACGGCGTCTCGGGCACCCTCTACCAACTCGCCGACACTGGATGGCACACCTCCGAGAACGACGTACTCTCCCCGTACAGCAGCCCCCGTCTCCCCGGCATGCTCGCCTCCCGCCTCCACCGCCAGCTGCGCGGCGTGATGGTCGTCGACCTGCCGTAGCCCCCGCATCGCCTCCGTCGGCGGTGGGGACCTCCCAAGGCTCCGGACCGCTCACGACTGCGCTGGCAGTTGCCGAGTAGTCTCCATGACGCTTGGCCGCTTTGCCGCATGAGCTTCGTGCAAGCTGAAGGAGTGACGAATCGGTGGGACAGATGGGTTTTTGGTCGCAATGTCGCGATTCAAGGAAGTGAGTAAAATCGGCCGTCCCGCCACCTAAACTGGCAGGTCAGGAACT # Right flank : TTTGAATCTCGGCGTCTACGAGAACCACCACCGACGTTCAGTCACGGAACGAGCCCGCGGAAAAGGAGTGTCCCAATGTGCCCAAGCTGGGGAGCGTCGAGCACCTGGGCGTTGATCTCCGTGAACCCTGCCCCGCGGCATGGGTGGAACAAGTCCAAGGTCAGCAGGCTGGAGAACGGCAGGCAGACTCCGACGCCCGATGATCTGCGCAAGTGGGCGAACGCAACCGGCCGGCCCGAGGCGTACGACGAGCTGCTCGCACGCCTCCGGGGCTTCGAGTCCCACATCCGGTCATGGCGGCGGCAGCTTGCCTCAGGGCACAAGCCCGTCCAGGACACCCACCTGTGCGCTCATGCCGACGCCTCCGTCTTCCGTGGCTGGGAATGCTCCATGATCTTCGGGATTCTCCAGACACCGGACTACGCCCGGTCGATCTTCACGAGGTACGCAGAACTGCAGAGGTCGCCACGTGACACCGAGGGAGCGGTCCGGTCCCGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 97337-95462 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXJ01000012.1 Streptomyces sp. CB01580 scaffold12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 97336 30 96.7 31 .............................T GGGCCGTCAGTCCGACGGCGCCCGCAATTAT 97275 30 96.7 31 .............................G GGTGGCACCCGCACCTGCACGTCGCCGTGCT 97214 30 96.7 31 .............................G ATCGGCCTCGTGGCGGTGCCCGTCATTTACG 97153 30 100.0 31 .............................. AAGAGCACCACTACGCTTTCCCTTGCGGTTG 97092 30 96.7 31 .............................A CCTCCTCATGAAGATCTTCGGATTCGTCCAG 97031 30 100.0 31 .............................. TCAGGAGCACACATGCTCGACACGCCCCCTG 96970 30 96.7 31 .............................G GCCCGTCCTCGATCCGGACCCCGGCCGACCT 96909 30 96.7 31 .............................T CGACTGCTTGAAGCTCTTCCTCGAGGCGGTC 96848 30 100.0 31 .............................. GGATCCGCCAGGAACACTGCCGCGGCATCGA 96787 30 96.7 31 .............................T CGGCGTCATCCAGGCCCGACCCAAGGACCTT 96726 30 96.7 31 .............................A TCGGATTCGCCGCCTAGAACGCGCCTGTACG 96665 30 96.7 31 .............................G TCATCGGCCCCGTCAACGGCTATGACGTGTA 96604 30 100.0 31 .............................. GTGGCTGTGCCTGACCCGGAAGCCGCTGGCC 96543 30 90.0 31 A..........A.................T TCGCTGCTTCCTGGCGGTAGTCACTCGCCGC 96482 30 93.3 31 A............................T GGCCGGGTGTTGTGCGCAAGGGTGAACCGGG 96421 30 93.3 31 A............................A ACGGTCCGGTCTCGTGCAACCTGTCGGCGCT 96360 30 96.7 31 A............................. TGAACGTCTTCCCGCTTCCCATGGGTCCGAT 96299 30 93.3 44 A............................G AGTGGTGGTCCCCCGCAACTCCGCAGGTCAGAGCAGGGTTGCGG T [96276] 96224 30 93.3 31 A............................A GGCGAGCGCTCCCCGTGCTCGGCGACCCCGG 96163 30 93.3 31 A............................A GGCGAGCGCTCCCCGTGCTCGGCGACCCCGG 96102 30 93.3 31 A............................T TCGCCTTCGTCGCTGGGTTTCAGAAGGTCGT 96041 30 100.0 31 .............................. TTGCATCTACCCAGGCCGGTGACCTGCGAGA 95980 30 96.7 31 .............................A GGTCCTGGACCATGCCCGGGTTCACCTCGCT 95919 30 100.0 31 .............................. CGGGTACCGATGGCATGACGAGCGGCACATC 95858 30 96.7 31 .............................G GGGGCGAATATTCGCGGTTTCGACTGCTCGG 95797 30 96.7 31 .............................T GCGGGAAGTCCGCGAAGACCAAGTGCATGGT 95736 30 96.7 31 .............................T GAGGCAAGGACGGGAAGGGGTGGTGGGACAG 95675 30 93.3 31 ............................TT ACGAGCCGCGCCCCGGTGACCCGGACCGGTG 95614 30 96.7 31 .............................T CGCTGTCGGCCCGCTCGGCCAGGATCTTCAT C [95597] 95552 30 93.3 31 .......................T.....T GCGCATTGCCATGCTGTCCGACGCAAAAGCC 95491 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================ ================== 31 30 96.4 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : CAGTCCCGCGTGGACCGGGTCGTCTACGGGGCGCGCGACGAGAAGGCGGGCGCCGCCGGTTCCCTCTGGGACGTCGTCCGCGACCGCCGCCTCAACCACCGCCCGGAGGTCATCCAGGGCGTCCTGGAACCGGAGTGCGCGGAGCGGCTGACGGCCTTCTTCCGCACCCCCTGAGAACCGATTTCTTTCCACGGCCCGGCATGGTCTAAGCTCTCTCTCGGTAGCGTGTCCGAGCGGCCGAAGGAGCTCGCCTCGAAAGCGAGTGTGGGGAAACTCACCGAGGGTTCAAATCCCTCCGCTACCGCCATCGACGCCCTCCCGGCCTGTGGAAACACAGAACGGGAGGGCGTTCGCGTTGCCGAGACAGCACCACCGGGTAAGCGGCGACCCCTGACCGCGCATACGTTGACACCACACCACCAAGACGAGGCGATATGTCCGAATCTCAAGAAGTGGGTAAAAACAGGCTCTGCCTCGCATAAACCAGCAGGTCAGGAACT # Right flank : GGGACTCGGCCGCCACGCTCGTCCCGCATACCTCTTCCCACATAGGGACAGCCCCCCGCTGACGAGTCGGCTGCGGGGTTCCTGGCCATCAAGACTCCGCAGCCCTACCGCACACGCAGGGGTGCTCCGACCAGCAACCAATCGTTCACGCTTTGATCAAGTTCGCCCACTTCAGAGCTATTTCGAAATCCAACACCTGATCGCCACATACTCATGTCAAATATCCCCATGAGCCAAGATCACCCCGAAGTCTTCTCGGCTTACGCCAAGTTGTCCCCCGCAGCCCGGACCGCCTGGGGCAAGCATGACCGGGCAACCGAGGAGTGGCTCCCTCTGTGGCGGCACATGGCGGACAGTGCCGCCGTAGCCGGACGGCTGTGGGACGAGTGGATCCCCGAGAACGTAAAAGAACTCGTCGCGGGCCCACTCCCTCAAGCCTTGGTAGATGCCCGTCACCTCGCCGTCTACCTCGCGTGCGTGCACGACATCGGCAAGGCCAC # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //