Array 1 47589-49011 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NGBO01000001.1 Neisseria lactamica strain NlUS07x1 NODE_1_length_264724_cov_73.9584_ID_12010, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	================================	======================================	==================
     47589	    32	 100.0	    35	................................	TCTTGCATAATAAAATAGCCTTTCGCTTTAAATTT   	
     47656	    32	 100.0	    33	................................	AGTACGTTCATCGCGTTTCCTTCCACTCATCAA     	
     47721	    32	 100.0	    33	................................	ATTCACAACCATTTTTATTGCTCCTTGCTTTTG     	
     47786	    32	 100.0	    34	................................	AAAAAGCATCGTGTTGTTTTGGCCGCCGAAATGG    	
     47852	    32	 100.0	    34	................................	CCCGGATACAAGGAAGATGTTGAAGTAGCCCCCG    	
     47918	    32	 100.0	    34	................................	TATATAGGAATGAAAACATTGAACAAACTGACGT    	
     47984	    32	 100.0	    36	................................	CACATCAAATCAGGCGGCAACGCCGACAGCGTGCGC  	
     48052	    32	 100.0	    34	................................	TGTCAAAGTGCCCATATCATATTGATGGCGATAC    	
     48118	    32	  96.9	    33	.......G........................	TAACGAAGATATCAAGCTGCTGCGGGTGTTGTG     	
     48183	    32	 100.0	    35	................................	CAGCTCGCCTATCATGCGCTTGCGCGACACGCCGA   	
     48250	    32	 100.0	    33	................................	GATGGATACGTATACGATTTCACCCGAATCTAG     	
     48315	    32	 100.0	    35	................................	TTCCCAGACATACTGGCTTGCGACAGGCTGCCCAA   	
     48382	    32	 100.0	    35	................................	GATTATGCGTCTTATGTCCGATTACAGCAGATTTC   	
     48449	    32	 100.0	    35	................................	ATACCGTAAACAAGGTTAAGTGGTCAAAGTGGTTT   	
     48516	    32	 100.0	    38	................................	AATGAACTTGGCTTGCTGATTATTCTTCTAATTGCAAC	
     48586	    32	 100.0	    34	................................	TGAGTCTTTCCCGAATCCTGCCTAATGGACTTAA    	
     48652	    32	 100.0	    34	................................	CCCGTCCGTCGGAAATGCGCCGGGTGGCGGAAGC    	
     48718	    32	 100.0	    34	................................	AATATCCTGAAAATAATGGGTCGGTCGTCATCAT    	
     48784	    32	 100.0	    33	................................	TTTCAAGGGTGTTCCTTGATTTGAATAGCATGT     	
     48849	    32	 100.0	    34	................................	TTGGTATAAATGCGTAACCTCGTTGGACAATCCG    	
     48915	    32	 100.0	    33	................................	TGAATAGATAAGGTTAATCCCATGCGTAACGCC     	
     48980	    32	  90.6	     0	............G.........A.A.......	|                                     	
==========	======	======	======	================================	======================================	==================
        22	    32	  99.4	    34	TCAGCCGCCTCTAGGCGGCTGTGTGTTGAAAC	                                      	       

# Left flank :   CATGGGGGGACAAGAAAATGCTGATGTTGATAACTTATGATATTTCGCTGGAAAATGCCGAAGGGCAGGCAAGGCTGCGGCGCGTAGCGAAACTGTGCCAAGACTACGGCGTGCGCGTGCAGTATTCCGTGTTCGAATGCGACATCGCACCCGACCAATGGGTAGTTTTAAAAGACAAACTTTTAAAAACCTACAACCCCGAAACAGACAGCCTGCGCTTTTACCACCTGGGCAGCAAATGGCGGCGCAAAGTGGAGCATCACGGCGCAAAACCGGCGGTCGATATATTTAAGGACACGCTGATTGTGTGAATCGCCAACCTGTTGTTCCCATAAAAATGCGGCAGGGTTGGCGAATCTGGGTTGTTCTTTAACAATCAGGATATTGCAAATGTGGATATGGCGGATAAGGCTGTGCTATACTCATGTTTGTGCTTTTTTCGAGAGTTTGGCGAAGTCGGGGCTGCAAAGCCTGATGTAGTAAGGCTTTCGGAAGAGGCT
# Right flank :  CGGCGCGGACGACATCCGTTTCCTGCGCGAGTAGGGTAAAGGACAATCTAAATTCCCCCGACAGCTTAAAATCTTGCCGGGTCTGCACAAAAATGCCGTCTGAACAGGTTTCAGACGGCATTTTGTTTAAATCAGGAATATCTTTGTCAAAAAACGGCTTGATGTTATCTGTACATATTAATATAATGATAATCATTATTAATTTAAATAGAGAAAAAGTAGAAATGCGTAAACTGAATTATTTCAGCATTGCCTTGCTGCCGTTGATGCTGGCAGCCTGTGGCGGCAATTTCGGCGTGCAGCCTGTTGCCAAACCAACGCCGACCGCGCAAACCCCGTCAGATTCCAAACCGTCCAAACCTGAGGACGTTCCCACTCCGCCCCCTGCCAAACCTTCTATAGAAACCACGCCGGTCAACCGGCCCGCCGTCGGTGCGGCAATGCGGCTGCCAAGGCGGAATACTGCTTCCTATAAACAAGACGGTACGGAAATTCCCGAC

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCAGCCGCCTCTAGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched TCAGCCGCCTCTAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-5.90,-5.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [45.0-43.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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