Array 1 191772-192403 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBWW010000005.1 Microbispora sp. H10670 NODE_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 191772 29 100.0 39 ............................. CCGTCGGTGTGACCGGGCCCACCGTTGCGTGTGCAGCGG 191840 29 100.0 36 ............................. CGTGATCAGGCCATGCATGGACACGGGCATGATCGC 191905 29 100.0 40 ............................. CCCCACTGCACGCACTGCGGGTAGAACCGCGGGATGAGCA 191974 29 100.0 36 ............................. CATGCGCCAGAACGTGCACACCTTGAACGACACCTT 192039 28 93.1 38 ...............C......-...... CGCGGCGTACACGTCGTGGCCGTGGGGGCAGGTGAACA 192105 29 96.6 39 ..............T.............. CGCGCACCAGATCTTCTTCGAGTTCAGAGACAGCATGCT 192173 29 96.6 38 ..............T.............. CTCCCGCCGTTGAACTCGGCATCGCCTGCACTGGTCAG 192240 29 96.6 40 ..............T.............. CTCCGGGGGCGGCGGCCGAGGGCGCGAACCCCTCCGCGCG 192309 29 93.1 37 ..............T..A........... TCAAGTCGCGCGGCCGGCGGGCATCCGTACCGACCTG 192375 29 89.7 0 ..............T...........T.G | ========== ====== ====== ====== ============================= ======================================== ================== 10 29 96.6 38 GTCCTCATCGCCCCAACGAGGGGTCGCAA # Left flank : GCCGTGCCCGCGCCTGCGCCGCCTGCTGAGGCGGCCACCCCGGCCCCTCAGCCGCGCCCACGACAAGCGGGAGACCGTGCGAGAGACGAGGCCAAGGGCGGCACGAAGGAGGGGCTGAAGGACAGCCCGAAGGACACCGCCAAGGAGGGTCCGAAGGAGTCGAAGCCGGAGACTCCCGCTCCTCCGGTGCCGAAGCCCGCTCCCCCGCGTCCTCGCAAATCGCGTGGCCGACGGGCCTCAGTCCCGACCTGGGACGAGATCATGTTCGGCGCCCGCAAGCAGGACTGATCAGCGCGGCAGCGCTCTCCCGGCTGCTACGCGCCCATATCTGCAGGACTGTCATCGCGCAGATGGCCCTAATGGCATCGTGCCAAGTTCAAGGAGATGATCCTGATCGTGCAGCGAACCTCCCGGGGTTTCTGCACGACCGGAGGTTCGCTGCAAAAGAACCTCTTCTGTCGTGCCATCTTGCATACGCCCACCTGCGGCTTTACTGTGGG # Right flank : GACGCAGCTCAGGCGCGAGGGCCGATAAGAAACGGGTGGCCCAGGTTGGCGGCGGCGACCTGGGCCAGGGCTCCCGGGATGAGGTGCTACTGGGCGGGCGTGGTGTCGCACCGCTGGGCGGTCCAGTCGAGACCGGCCTGGCAGACTTGCCTGACCCAGTCGCGTACGAGCGTCTCCGCCTCGTCAGACTGGACGCCGAACTGCGTCGCTGTCCAGGAGACCAGTTGACTGTCCGGCCTGGAGGCGGCGGCGCAGATGCGGGCCAGCAGCAGGTGCACCCTACGGTCGCCCTCAGCGAGGATCCCGGACAGCGCCTTCCGCGCCGTCGTCTCCTCCTCGGCGCGGATGACGAGGTCCTCGGGGCTCGACTCGGGAACGGTCTGCCACGGCAGGGGCTCGTCGTCGTGGAGATAGAGGGCCACGTTGGCCATGAAGAAGTCGCGCCGCAGCGACCGCAGCAGCTCAAGTTCCTCACGCAGCAGACGCCTCGCGGTAGCGAG # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCAACGAGGGGTCGCAA # Alternate repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.30,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 212486-211917 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBWW010000005.1 Microbispora sp. H10670 NODE_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 212485 30 100.0 41 .............................. TACCACCCCAGTACGCGTGGGCTCTCGTGGACGTCGTAGTC 212414 30 96.7 36 ...............G.............. CCGCATCCACGGACCTGCTGTGTGTCGGGTACACCG 212348 30 96.7 38 ...................A.......... CGCACCGTGGGCAGCTCAACGCGGAACACCCTGGCCAG 212280 30 100.0 36 .............................. AGCGTCTCCCGGACGATCTGGGAGACCTGCTCGGCC 212214 30 96.7 37 ......................A....... GCCGCGATCACCGCGCTCACGTTCATGTCGGCCAGCG 212147 30 100.0 35 .............................. CATACCGCTCTGCCAGAGGCGCGCGGTGTGCTCGG 212082 30 96.7 36 .............A................ CTGACGAATCCGGCGTCGGCCAGGCCCTGGATGGCG 212016 30 90.0 41 .........A.....G........T..... CTCGATCCGGCCGGGCTCGCCATAGGCCGGCATCTCCATAA 211945 29 83.3 0 .....T.........GG.-..........T | ========== ====== ====== ====== ============================== ========================================= ================== 9 30 95.6 38 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : GGGCGTACGCTCCACGACGTCGCCGCGCCTGGGGAAAGACGGGCGCACTGTGCCCCAGCGGAACCATGCCGTACGGTCCCGCTCCCTGCGCGTGGAACTGCCGGCCCAGGTCCGGCGCTTCCCGCGCGAGCAGGTCGTACGCCAGGGACCGTCCGGGAGCCAGCACATTCGCCCATGCGAGCTCGGTCGCCGCCGTGGCCACCTCGATCCGTACTCTCACCGCTCTCCTCCTTGCGTCTGTCCTTCGTGGAACACAGATGGACGAAAGCCGAGGCCGGTGTCTGACCTCGGCGTTCTCCTCGGCGCGCCCGCCCGGGAGACAAGGCGGAACGGACGATGGCTACGGCAAGAGGTGGGTACGCTTCTGCCGGTGCAAGCGGCCTTCTCGATCATGGTTTTGCAGCGAACCTCCCGGGTTTTCCGCACGACCGGAGGTTCGCTGCAAAACGACTCTTTCAGCAGCCGCTGTTGCGCCCCGCGACCTGCGGCTTTACGTTGGG # Right flank : GGCTGACTGGCGACGTCCATGCCGATTGGCAGCATGTCGGCCCGTCCATCCGGTTTATGACTGGTTGCGAGAGGCGAGGTCGCGGTTGCTGGTCTCGGGGGCGGTTGTTAGGAGTTCGGCCCAGACGGCGTGGCCGATGGCTTGGGTGCCGCGGAAGCCGACCCGCGATGCCAGGGCGGCGACGATGGCCAACCCTCGCTGCCGCTCGGCCAATTCATCCCCTTTCCGTTGCTTGAAACTGGGGGTGCCGCCCCAGCCGCAGTCGTAGACGGAGACGCGGATGATCTGGGGCTTACGGGTGACCTCGACGATGAACGTGCCGCCCAGGCCGCCACTGCTCGTATGTACGACGGCGTTCGCGGCGAGTTCGGCAGCGATCTGCTCAAGGTCGTCGCTCAGAGGTGAGTCCTCCAGCAGGAACCGTACGAAGCGGCGGGCGCGGGACACCTGCTCCAGGCGGCCGGGGAAGGTACGTCGCCAGGCGAGACCACCTGGTCGAA # Questionable array : NO Score: 2.63 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 214841-216275 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBWW010000005.1 Microbispora sp. H10670 NODE_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 214841 30 100.0 35 .............................. ATGGCGGGCTTGCCGCAGACCTGGCACAGGCCGAA 214906 30 100.0 36 .............................. GTCATGAGGCCGCGCTCATACGCCATGAGGTTGGTG 214972 30 90.0 36 .........G...........C.....G.. GTCATCATGCTGGCCCGGCACAGGGCGCGGGTGTAG 215038 30 93.3 37 .........T.....G.............. CCTAAGAGGGCGGCTGTCCGCCAGTCCTTGGGATCTA 215105 30 100.0 37 .............................. CTGTACGGCGCGCCCTTGAAGAACACCGTCCGGTCGT 215172 30 100.0 37 .............................. ATGTCCCCCGCCCCTAGCCGTTCTTGTGCAAGGACTT 215239 30 93.3 35 ..T......................A.... GCGCACATCACCGACGTGGACGGGCCCGTGCAGTC 215304 30 96.7 40 ..T........................... ATGGTCTTGATCCCGTAGGTGCGCTCGGCATACGCAGTCA 215374 30 96.7 40 ..T........................... CCGACGACATCCGGGGCGGTGACGAACAGGCACCGGTCGG C [215388] 215445 30 96.7 33 .........G.................... CGAGCTATGAGGAACCTATTGAGCTGGGGGACG 215508 30 93.3 35 .........G..........A......... AGCTGGTGTTAGGTCGGGATGGACGGTACTTCGTG 215573 30 90.0 36 .....T.....T.................G ACGGTGACCATGCGCGACTCGCGAATGCGCACGGCG 215639 30 93.3 36 ...T.........................G ACGGTGACCATGCGCGACTCGCGAATGCGCACGGCG 215705 30 96.7 36 ...T.......................... GTCATGAGGCCGCGCTCATACGCCATGAGGTTGGTG 215771 30 90.0 36 .......C.G...........A........ CTGGCCTGCCGACGGGCCCGTGCCCAGTCGACGCAG 215837 30 93.3 39 .........G............A....... TCAGGGCGTAGATCGCGTCCCTGATCTGGGTCTTGATGG 215906 30 93.3 40 .........G......A............. ACGGTGGGGCTGAGGCGGAGGCTTCGGATGGGGTTTTCGG 215976 30 96.7 38 .........G.................... ATCCATCCCCAAGGGGGGTTCTCTGGGTACCGTCCCAC 216044 30 93.3 38 ...G.....G.................... TCGTGCCCGATGCGCGTAAGGGGAAGGATCCCGACCGT 216112 30 93.3 40 .........G...............A.... GTGCTCGGGTACCACTGCCAGCGCCAGAACGAGCTGACCA 216182 30 96.7 34 ...................C.......... TACAGTAGGTCAGCGAATCGCTGTAGCTAAACGA 216246 30 86.7 0 ...........G...............GCA | ========== ====== ====== ====== ============================== ======================================== ================== 22 30 94.7 37 GTCCTCATCACCCCTACGAGGGGTCGCAAC # Left flank : GCAACGTCGCCTACGACGAGTTGCTCTATCTGGAGGCGCTTCAGCTCACCCGCCGATGCCTGGAGGGCACGCCATACAAGCCGTTCCGGATCTGGTGGTGAGGCGACGTGTACGTGGTCGTGGTCTACGACACGCTGGCGAAGCGCAACGCCGCCATCCTGCGGCTGTGCCAGCAGTATCTCCACCACGTGCAGCGCAGCGTGTTCGAGGGAGCGCTGAGCCCGGCACAGCTCAAGAGATCTTCGCCACCGAGTCGAAGAGGTGATCGATCAGTCGTACGACAGCGTTCTCGTCTTCACCTTCCCACCCGGCGCCTCCCCCGAACGCCAAGAATGGGGCGTCGCCCAGCCCGCCCCCACGGACATCCTGTGAAGCAACGCCTTGATCATCATGCTGATTGCAGCGAACCTCCCGGTTTTCGTGCACAACCGGAGGTCCACTGCAGAATCCCGCGTCAACCAGGCATCAGAATCCATTCTGACCTGCCGCTTTATAGTGGG # Right flank : AAACCCGGCTGCGCCGGATCGAGGCTGGTGGATCCGCCGTCCCTATGGGGCGGCGGCGTCCGGGTGATAGGGCGGAGTCGGCCGGTCGGCACGCAGACTTTCGCACGCGTGGTGCGCCCGCGAGAAAGTTTCACGTGCGGACCTGGGTGAGGTGCCCGGGAACTGCGTGCCCTCCCGTACGGCCGACGCCCCGGTTGCGGCGGGTTGCGCGGAGTGCGGCACGTCGTCCATGATCCACGCCATCCACATGATCAGGAGGCCGTGCGGGATGGCGTACCAAACAAGTGGGTCGCGGCGTGTGGTCGTCGTGATGTTCGCCGTCGCGCTCGCGGCGGTACTGACCGCACCACCGGCAGCAGCCGCGCGGGCAGCGGACAGCGCGGTGGCGGCCTCGCAGGGGGCGGACAGCGCGGCGGCCGAGCGGAGCACGGACAGCACAGAGAGCACGGAGGCCGCCGCAGGGGCGGACAGCGCGGCGGGCCGGTTCGGGCGGCAGGAGT # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCACCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //