Array 1 31660-33104 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083911.1 Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 31660 36 100.0 35 .................................... GCCTATGTCGGCAGCTACCACATACAGACCTGTCG 31731 36 100.0 34 .................................... ACGAGCAAAGGTATCGTTTGTTTATAAAGACGTG 31801 36 100.0 34 .................................... CCTGAGAGTATGCGCGATATACCGCGAGCGGACC 31871 36 100.0 34 .................................... TCATGCTCCAAAGTATACTTGGTCTATTGATGAT 31941 36 100.0 33 .................................... CCCAATCACCGGAACATCCACCTCTTTCAGATC 32010 36 100.0 34 .................................... GTCCTGGATATAGGCCAGCGCTTTATACCAGTCA 32080 36 100.0 34 .................................... TTTTCCCCGGCTACTGTTATCTCTTTAAAATACG 32150 36 100.0 35 .................................... CTATATCGTTAATATCTTTTAATGATACCAAATTT 32221 36 100.0 35 .................................... AGGAAGATCTGTTCTTTGTTTTCTAAGAGTATATT 32292 36 100.0 34 .................................... GCGTTGAGCGGCATGACGTTGGCAGCGGACATTT 32362 36 100.0 34 .................................... CCATGTCTTTGCTCCTATTGAACCGTTGTTAACT 32432 36 100.0 34 .................................... TCGCCGTCATTGCTCGTCCTCGACGTCGTCAGAA 32502 36 100.0 33 .................................... CGTCCGGGCGAACCGCCATTCGCCCTCGTAATT 32571 36 100.0 33 .................................... CGGTCGATGTTGCCGATTGCAAATTCATGGAGT 32640 36 100.0 36 .................................... CCAGTACACACGATCTCCCACCACGATCCATTGCAC 32712 36 100.0 35 .................................... ATCGCCGAAGCCGCTTAGACGACGCGGCTCGGCCA 32783 36 97.2 38 .....................T.............. TGGTCCACTTCGTCGCGCCCGTCCCGTCGGATTCATAG 32857 36 91.7 35 ..............T.............G.....G. GAGGGGACAATGTGACACAATGTCACAATGTCCCC 32928 36 88.9 35 T...........T...............G.....G. GATGGACATTGTGACATCGTGTCACAATGTCCACG 32999 36 88.9 35 .....G....T...........G...A......... AATGGAACAATGTGACGCGATGCCGCGTTGTTCTG 33070 35 75.0 0 ...T.GT...T.T.....C......A......-.T. | ========== ====== ====== ====== ==================================== ====================================== ================== 21 36 97.2 35 GTTAGACCGAAGCCCTGAAATCAAAGGGATTGAGAC # Left flank : CGGGTGAGGTATGCCTGGACATCGAAACACCGATGCGCCTGCAGCACAACGGCAAACCCCTGCCCGCAGCGGCGCTCAGCCCGCGTGCGTTGCTGCTGACTGCCGCGCGCCGTATCACCTTGTTGCAGGATCTCTACCTTGGCAGCAAAATCGAGGGACTTCCGCCTGTTGGCCAACTACTGCAAGCCATTCCGGCAATTACGGACGACCGCAGTCAGCTGCAGTGGCGCGACTGGACCCGTTACTCCTCGCGCCAGAAGCAAGAAATGACACTCGGCGGCGTCGTTGGCCGGTGGCGCTTGAGTGGCAACGTTGCCGTCATGTGGCCGTGGTTGTGGCTGTGCCAGTGGCTACACATCGGCAAGAACGCCACGATGGGAATGGGGGGGTACCGGTTGATATCATTATGATCACTTTTCAGAAAGCCCTGGCGCGCCACAGAAAAATTCGCAAGCGTGTTGCCAAGACGTTGAATGTTAACGTATATTCGACGGTCTGCA # Right flank : CGGTGCTGATATGGGGTCGGCGGCGATGGGTTTGGCGGCGACGTTGCCGGGTCGCGCAGGCTGTACGGGTACGAGTTCTGTTGGCCGAAGTGGCAACGTTGTCGTTTGGGTGTCGCGGTCCGGGTGGCGGTATATTGGTTGCGTCAGTCGATGTTCTGCGGTGAGTTCACCATGACGCAGCGGTCTCTCTATCTGTTCTGTTACGACGTTTCGTGCTCGCGTCGGCGGCGGCGGGTGCAGCGCTTGTTGGCGACGTATCGGGTCGAGGGGCAGAAGTCGGTGTTTGAGTGTCTGATGACGTTGGCCGAGGTGGCCGACGCCGTTGAGCAGTTGCGTCGGTTGATTGATCCGCAGACGGATCGGGTGCATGTGATTGCGCTCGATCCGCGCCTGCCGCGCGAGGGGTTGGGTCGCGGGCAGCCGTGGCAGGGTGGGCCCCACGTGGTGGCGTAGTGGAGGTGTGCGATGACGACGCTGTATGTGGACCGCAAGGGCGTGCA # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGACCGAAGCCCTGAAATCAAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 1785371-1786314 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083911.1 Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1785371 28 100.0 33 ............................ CCGAAAGGCTGAAATCCCTGCGTGAAATGACGC 1785432 28 100.0 34 ............................ CGTAACCGAAAGCAAGGAGAGTAAGATGGGCTGG 1785494 28 100.0 33 ............................ CTTTGAGCATTAGCAAGCTTTCCAACCTTATCG 1785555 28 100.0 33 ............................ CCATTCGATCCCGTCCGACGGCTGCTATGTCGT 1785616 28 100.0 33 ............................ TGCCCGGGACCATTGTCTATTCTGGACCGTCGC 1785677 28 100.0 33 ............................ TGGACGCCGAAGGCCGCCCATCTGATCGCGCAG 1785738 28 100.0 33 ............................ TAGATGATGTTCCCGGGCATTATCCGTTCCCCT 1785799 28 100.0 33 ............................ GTGACGGAGCGCTTCGCGGATTGTACCCTAGCG 1785860 28 100.0 33 ............................ TGCCGGGGACCATCGTCTATTCTGGACCGTCCA 1785921 28 100.0 33 ............................ TACACACGATTGGCGCGGCGTCGAACCCGGACG 1785982 28 100.0 33 ............................ TTAGAGCCCGAAATCAACTCTAGCGGTAACAGT 1786043 28 100.0 33 ............................ GCACTGACCAGTCCTGGGGCTATGCCCTAGATA 1786104 28 100.0 33 ............................ CACTACGCAGCACGTAGCCGGTGGTCGGCTACG 1786165 28 100.0 33 ............................ CACCTCGTCTTTTTGCAGGGCCTTGCTGCCCAG 1786226 28 100.0 33 ............................ GCCCTATTGAGGCTTCGCGCATAGGGGTCGACA 1786287 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 16 28 100.0 33 GGTTCCCCCGCGTATGCGGGGATTGACC # Left flank : GGCGTTTGGTGCCGTGCAAGCGATCCAACAGCGCAAGTCCGACCTGACCGTCGAGCGCGAAGTCCGGCGGCGAGCGGTGCAGGCCTTTCGGCGGGAAAAACTCATCCCCCGCATGATCGAACGTATCAAGGAGCTGTTCGATGTCGATGACCGTGGTGGTGACGCGTAACGTCTCGGCGCGGGTGCGGGGGTTTTTGGCGTCTGTGATGCTCGAGCTTGCCCCCGGGGTCTACGCTGGGCTTCGAATCTCGCCCGCGGTTCGAAGCCGGGTTTGGCAAGTCCTTGAACAATGGTTCACACACGAGTCACAAGCCTCCATCATCATGCTTTGGCCCGATAAAGAAATACCAGGCGGACTGGAGGTCAACACCCTGGGCACACCGCCGGTCAAGCTGGCCGACGTCAACGGTATCCTGCTGAGCCAGCGTCCGATCCGTCACACGGAGGAGTAAGCGCGAAAGTGACGTTTTATGTTCTTTAACAATGGGTTAGAATAAAGA # Right flank : CGTCTGGCACTGTACCCTGCGGCCTGCCTCTTTAGTCGTCCCTGAAAAATTCATTTTCACGCCGCCCTTAGCCGCAGCTGGGCAGGGTTGGCGCCACTGGACTCGGTTGGCCGCCGCTGGGCGAGCCACCGGCCGATGAGGCGCACGGCCGCAATGAGGCGCAAAAAAGCTCGCCTCAAGAAGGGCACGCCCTTCTTCGTGATCATGCGCAGCAGCCAGCGGATGTTGTAGCCCGCCGCGCACAGCACCGCGTGCAGCCGGTCACCCTGCTCGCCCTTGAGGTGGCACCTGTCCATGCGGTGATCCTGCTTCAAGTGCCCGATGACCGGCTCGATGGCCTGGCGGCGCTTGAGCAGCTTGCGCTCCTGCTGCGTGAGGCGCTTGATCTTGCCGCGGTGCACCAGGCGCACATCCGCAATGTCGGCTTCCACCCCGCGGTAGCCCAGATCGGCAAACGCTGTGCTGGGCTTGATGCCAGTGTCCTGCATCAGGATCGTGGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGTATGCGGGGATTGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 3 1787986-1788989 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083911.1 Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1787986 28 100.0 33 ............................ TCGGCGCATATCTTGCGCACCGATTCCTTGACA 1788047 28 100.0 33 ............................ CGTTCCCGGGCATTATCTATTCTCCCCTTGTTG 1788108 28 100.0 33 ............................ TCTCGGCCCACTGGCCGGGCTTGACGTCGGCAA 1788169 28 100.0 33 ............................ CGACGGGAGACCTCGACCGCTGAGTAACCCTGC 1788230 28 100.0 33 ............................ CATTATCTATTCTGGACCATCTAGGTTCGACGC 1788291 28 100.0 33 ............................ TCCGTGGCGATAGTGGCGCATGGTCCGGGCCGC 1788352 28 100.0 33 ............................ CGGATAATGCCCGGACATATTATCTATTCTGGA 1788413 28 100.0 33 ............................ CGAATTCACCCAGCTTCATGCCTTCCCCCCGAT 1788474 28 100.0 33 ............................ CCCTTATTCGTCGTCCGAAGACCCGCTATCCAT 1788535 28 100.0 33 ............................ CACGACCGTCCGTCGGCCCACCCGCTAGACTTC 1788596 28 100.0 33 ............................ GCTCGCTCTCGTAGCTCAGCCGGCAGTGCTCGC 1788657 28 100.0 33 ............................ TTCCTTGACAGTCGCACCACAAGGCCGCGACCC 1788718 28 100.0 33 ............................ GACGTTCGAGCGCGCTCAGACGATCCTCGATCG 1788779 28 100.0 33 ............................ CACCGCCGTCATGGCCGTGCTGCTCGCTGCCAC 1788840 28 100.0 33 ............................ ACAGGTCATCTACCGCGACCGGCAGGAGCTGCA 1788901 28 100.0 33 ............................ TGCGCACGATAGCACCTCACAAATTGAAACCCA 1788962 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 17 28 100.0 33 GGTTCCCCCGCGTATGCGGGGATTGACC # Left flank : GTCGCACGGCCGGCGATGTTCAAAGTACGCCCGCCCCGAGAAGAACTGCCATGTGGGGGTTTCGCCCCAGCGCTCGACCACCCCTTCGTCCGACTCGTTGAAGGCGTGCTTCAGATACAGCAGCGCGATCATCACGCGCAGCGGCACGCGGGGTCGGCCTGCGTTGGACGCCCGAGCTGCGCGCACCGGAGATTCGCCAAAGAGGTCCAGATCGGGCATCGCGACACCTGCGCGCGCTTTGCGCATGAACAGGTGCGACAGCCTTGCTTCCAACTCCTGCCACGGCATGCGTGAGGACAACACCGCCAGCGGATGGCGCAGGTCGATCATCTGATCGAGCCGGGCGCGGAAGAAGTCCTCGGTGGCGGGGCAGGCAAACATCGCAAAACTCCCAGAAAACGGCGCATCAGACCATCAAATCTGGGGGAAATTGTACTCGCAAACAGACAATAACACAAGAAAAATCATGCTGTTATGAATATTTCAGGGGCGACTCTTTA # Right flank : CCCCGATTGTTACCGCTAGGTGTCGCATCCCGGATGATTGGATAGTGCCATCACGCCATGCGTACCTGCTGGCGGTAAGCGTTCTGCGCGAGCTGCTGGGCAGCGGGTCAAGGCGTTGACGACCATCATCGGGAGATGCCCTCATGAACATCAAGCTGCATGCCCTGGCGCGTACAACGCCAGCCATACGGCGCGAGATCGCGCTGTCGGATGAGCCGGCTGCGGTGTTGGCTGAGCGTTACGGCGTTTCGCTCATGACGGTGTACAAGTGGAAGCGCCGCGAGGATTTTCTGGATCGCTCCCACACCCCGCACCGGCTGCGTACCACCATGACCCCGGCGCAGGAGGCCATTGCAGTGGAGCTGCGCAAGACGCTGCTGCTGCCGCTGGATGATCTGCTGTCGGTCATGCGCGAGTTCGTCTGTCCTGACGTGTCGCGCTCGGGACTGGATCGCTGCTTGCGACGCCACGGCGTGGGGTCGCTGCGATCCCTCAAGCCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGTATGCGGGGATTGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 4 1790107-1792696 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083911.1 Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1790107 28 100.0 33 ............................ TTGTATGTATCGCGTTGACCGAATCGACAAACC 1790168 28 100.0 33 ............................ CCGGTCAGTACTTTTTCCGGCTTCAGGGTTCGC 1790229 28 100.0 33 ............................ CCCGGTCAATGGGTCGAGATTGACGGCACGAGG 1790290 28 100.0 33 ............................ CAAGATCGCCGACCTTGCCAACGTCAAACCCGG 1790351 28 100.0 33 ............................ TGAAGTCACCCGGCTTCATGCTTACCCTTTCAC 1790412 28 100.0 33 ............................ CGGCCATCGGTCGGGGTCGCATGGTGCGGGTTG 1790473 28 100.0 33 ............................ TTTCAACCCATTGACCGGGTTTGACGTTGGCAA 1790534 28 100.0 33 ............................ TTGCTTATCAACAAGAACGCTCTTGTGCTTATG 1790595 28 100.0 33 ............................ TGGCGGCAAAAGGTGCAGGAGTTTCACCAGAAG 1790656 28 100.0 33 ............................ TCGTGCGCCTCGAGATAAGCAAAAAGGGATTCC 1790717 28 100.0 33 ............................ CCATTCCTCCGAATGCCGCGCCATCACGCGGCG 1790778 28 100.0 33 ............................ TGGAGCAGTCCCGGCCTGCGGCGTATTTCCAGT 1790839 28 100.0 33 ............................ CAGCGCGTCCTGCAGGCGGCGCGCGTCGCGGTC 1790900 28 100.0 33 ............................ CGGCATACCTCATGAAGTACGTGACCAAGGTGA 1790961 28 100.0 33 ............................ CCAGCTCGCGATATTGCTGCCGATGTTGCTCAC 1791022 28 100.0 33 ............................ CCGCACTGACGGGCCAGTAACAGGGTAGCCATC 1791083 28 100.0 33 ............................ CTTCCTCGCCAAGCTCGCCGCGCCGGAGGTGCA 1791144 28 100.0 33 ............................ CCCCATGGAGCCGGACCGCGCCCGCGCCATCGC 1791205 28 100.0 33 ............................ CGGGCCGCCCCCTTGTAGCGCTTGCCAGCGTCC 1791266 28 100.0 33 ............................ CCGGGATAACCCGAAACGTACGCCGCCCTTTGT 1791327 28 100.0 33 ............................ TTCGCGCATAGTTTGCGCGCTGATTCCCTCTGC 1791388 28 100.0 33 ............................ CCGGTCGGGCGATGGCCTCCGAGTGCCTCTTGT 1791449 28 100.0 33 ............................ CCTTTGCCGCCGTACGCGACATGCCCGTGATCA 1791510 28 100.0 33 ............................ CTGCGCGAACGAGTCCCGGCGCAGCGCCTTGCG 1791571 28 100.0 33 ............................ GCGGTATATACCGCACGCGGGCCATGCGCCAAA 1791632 28 100.0 33 ............................ TGATCCTCATCGCGTTGTTTTGGGCGCTGAAAT 1791693 28 96.4 33 ..C......................... GACCTCGGCCACGCCGTCAGCGCCGAAGTGCGC 1791754 28 96.4 33 ..C......................... CCGTCTGGCCTTTTCGTTGCTGGCCTCAACCCA 1791815 28 96.4 33 ..C......................... CCGGAAGACCATAACGACGGATGAGGTTTTTCA 1791876 28 92.9 33 ..C.........C............... GCTGCACGGCCTAGAGTGTCCCGTCGGGTATCG 1791937 28 92.9 33 ..C.........C............... ATAGTCCGCCACTTCTGTGAGCACGCCCTCATA 1791998 28 92.9 33 ..C.........C............... AATCCGTGAACACCCCACGGGCGCTGATCTTGT 1792059 28 92.9 33 ..C.........C............... GTACCGTTGTTTGGTGTCGTTCATGGTGTCCTC 1792120 28 92.9 33 ..C.........C............... CGCCTCTGTCACCGTCTCCGACGCCGAAAAGGC 1792181 28 92.9 33 ..C.........C............... TGTGCCGTGGCGACCAATCATGAGCACCACGCC 1792242 28 89.3 33 ..C.........C............C.. CGACCCCGACAACCTGCAGCCGCTCTGCCGCGA 1792303 28 92.9 33 ..C.........C............... CGACCCGAGAGCGAAGCCCTACCGTTTCGAGCG 1792364 28 92.9 33 ..C.........C............... TTGAACCCGAGCCACGCGACAAGAAACGAAAAA 1792425 28 92.9 33 ..C.........C............... CCGTAGCCAGCTGCAGCGTCACCCGAGCGGCGA 1792486 28 92.9 33 ..C.........C............... TGATTGCCGCCGGCGAGTACCGCTACATCTCCC 1792547 28 92.9 33 ..C.........C............... CACGCCCGCCGGCCGTAACAGCGAAAAGCCCGT 1792608 28 92.9 33 ..C.........C............... CGCGACTGGCGGCGTATCGCGGTCACAGAGGCG 1792669 28 89.3 0 ..C.........C.C............. | ========== ====== ====== ====== ============================ ================================= ================== 43 28 97.3 33 GGTTCCCCCGCGTATGCGGGGATTGACC # Left flank : CCATCGACCGTGCCACGCGCTGGGTCTTCATTGCCCTGTACGCCTCCAAGAGCGCGAGAAACGCGCGCGCCTTCCTCAAGTCGCTGCTCACGGCGTGCCCGATCAAGATCAACAAGATCCTCACAGACAATGGCAAGGAGTTCACCGCACGGCTGCTGGGGCAGCCCAGTGCCACCCACGCCTTCGAGAGCCTGTGCGAGGCACTCGGCATCGAGCACCGCACCACGCGCGTGCGACGCCCCCAGACCAACGGGATGGTAGAGCGCTTCAACGGCCGCATCGAGGAGGTGCTGCGCAGCCACCACTTCATCAGCGGCGAGGATCTCGAGAAGACCCTGCTGCGCTATGCTTGGCTTTACAACCACCAGCTGCCCCAGGCCGCACTCAAGGGTCTCACGCCCATGCAGGCCATGAAACAGTGGTACACGTCACACCCGCATCTGTTCCAAAAACGGCCATATGATCATCCGGGATGTGACAGCTAGGGCATGATCCGCGAA # Right flank : CCAACCATCGCGCGGGCCGGCGGCATCAGCGCCGGAGCTCCCCTCCCGCGAGGGATCAGCCCGCATGAGCGGCTTGCGCCAGCACCTTTGCCGCCCATTGGTTGAGACTTGTGCCCGCTGCTTGCGCCGCCACCAGCGCGGCGCTGTGCACTTCGGGCGGGACGCGCAGCATCAGGCGGCCAGAGGCCGGCTTCTCCGGCTTTTTGCCGAGCTTTGCGCAGGTCTCCAGGTAGTCATCGACGGCTTCCTCAAAAGCGGTGCGCAGGTCGGCCACGTTGTCTGCGTGGAAGCTCACGATGTCCTGGATGCCCAGCAGCCGCCCCACCAGGATGTTGTCGCGGTCGTCAAATTCGATGCGGGCGGTATAGCCCTTGTAGGTCATGGTGTTCATGGCTTGACTCCGATCCGTTCGAGAAAGGTGCGTGCATCCTCCACCTGATACGGCTTGGCTTCCTTCGCCGGGTGCGGGCGGTGGAAGGTGGCGACCTTGTCTCCGAAGG # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.99, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGTATGCGGGGATTGACC # Alternate repeat : GGCTCCCCCGCGCATGCGGGGATTGACC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //