Array 1 55175-54237 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP022242.1 Aeromonas caviae strain WP8-S18-CRE-01 plasmid pWP8-S18-CRE-01_1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================= ================== 55174 29 96.6 32 ............................T CATCATGAACGTACTGAAACTGACCGCCGCCG 55113 29 100.0 32 ............................. GCGTGTAAAGCGTCCAACGTGACTTACAGAAA 55052 29 100.0 32 ............................. CTGCGGCGGGTTTCCCTGCCGATTCGCCCCTG C [55048] 54990 29 100.0 31 ............................. GCTGGCACCAGTAGAGCCTGGAGTGCAACGC 54930 29 100.0 32 ............................. AGATTGGCGAAGTCTGCATTGGTAATCCGCTG 54869 28 96.6 32 ....-........................ AGCTTTATGAGCTGAAACAGCTGGTGATCCAG 54809 28 89.7 31 C...-...........C............ AACGAGGCTACGGGCAATGTAGCCAGAAAAA 54750 29 82.8 31 .ATCG.......................T CGCTTCCCACCAATGGCTATCCAGCACATTC 54690 29 82.8 92 GATCG........................ CGCCCAGTTTTTACATACCGATGTAATGTTGGAGCTATCCCCCGAACCTGGGGGTTAACGCCGCAAGGGGAGCTGTTGCTATAGCGGGAATG 54569 29 82.8 31 .ATC....A.......C............ CGTCAGCACATCACACAGCTATTGAGCACCA 54509 28 75.9 32 GATCG...-.......C............ TTTTCGATGATGTCGGTGGCGTTTGCCATCAT TA [54504] 54447 28 93.1 32 ..........-.....C............ CCCGCGGGATAGAGAAGTGGTGCCATCAGCGC 54387 28 86.2 93 ...T.T......-..C............. TGCCCTTTTTGTGCACAAACAAAAAAATCAAAATCCATCCCCCTGTTACGGGGGTTAACGAAGCGGGACGTCGTGGTGCTGTGCTGCGGCTGC C [54372] 54265 29 86.2 0 ...T......A.....C...........T | ========== ====== ====== ====== ============================= ============================================================================================= ================== 14 29 90.9 41 ATCGCCCCCCCGCAGGTGGGGGTTAACGG # Left flank : GGCAATAAAGAACGCATCGCCTATGTGCCTGACGGGGCATGGCAGCGGCTTATGCGGTGGGTGGAGGAGGTTCGTGGTGATCAGCCAGGATCGCTGTTTCAGCGGATCAGGCGGTTTGATGATGTCACCGCCGACAGAATGACTGACCAGGCTATCTATCACATTCTTGAAACGAGAAGGATTGAGGCGGGGCTGGAAAAATTCGCTCCTCATGATCTCCGCAGAACCTTTGCATCGGCCATGCTGGATAATGGCGAGGACATCATCACGGTCAAGGATGCGATGGGCCATGCCAGTGTCACGACCACGCAGAAGTATGATCGTCGGGGAGATGAGCGATTGAAACAGGCCAGTCGGCGACTCGATTTTTGAGTCGGAAGACCAATGTTAATCAGTTGCGCACTCAGAATTTAAGAGGTAAATTTCAGCCACCAATCCTCAAGTGTGCGAACATCGCTGAACGTGACCTAATCTTGATGGTAATTGTTGACTTGGTAAGT # Right flank : TAGCTTCACACCAGGCCTTGATAGCATCGCCGATCTATCCCTCGCGACTGGGGGTTATCGGGAGGAAGCATGGCACAACAGAACGTTTTCCTTCTTCGATTGAGGGTTATGCGCGAAATGGCCGCCGACACCGACTCGGTGATCTCTGCCGTCACGGCCGAGCTGCCAGTCGGTTTCCCTGAGCACATTAGCAAGGCCATTTTTTCTGGGTTGTCGGCTCAAGCAGCCAAGCTTCTGAGAGGGTGAGAAATGGCTGAAATGAGCAATTTTGGGGAAAGCTTCAAGCTTTATTCCGACGGGCAACGAGATCCTGTCAAGCGCACAGGCCTGAACGTCCAGTACACAGAGACTCGGGCCAACTACCCGACAATCAGCATCGAGATCGCTCCCATCCGGGCGGCAGGAGCAAAAGCAGACTGGGAGCAGAAGATCACAGTACAACTGACCAGGGCAGAGCTGACCGCGTTCTGCGGTGTGATGTTTGGGCTCAGGAAGGATGC # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCCCCCCCGCAGGTGGGGGTTAACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //