Array 1 7891-10303 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXCZ01000014.1 Apilactobacillus kunkeei strain LAla contig014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 7891 36 100.0 30 .................................... CTTTCAAATGACCACATTCTCGTCAACGCG 7957 36 100.0 30 .................................... AAGAGAGTAGGTGATGACGATTTCGTATCG 8023 36 100.0 30 .................................... ATCTCCACTTCAATGTGTGGCTCTTCTGAA 8089 36 100.0 30 .................................... TGAAAATGAACAACGTGTTAAATGAACTAG 8155 36 100.0 30 .................................... GACTATTGGATTGCACGACCGTAATACTAT 8221 36 100.0 30 .................................... AAGTAAAAACGAAAAATTGTTGGACAAATC 8287 36 100.0 30 .................................... ACATTGGAATGCTATTAGGTTCAGTTTGTA 8353 36 100.0 30 .................................... AAGTCGATACCTTCAAAAGTAAAGTCGGTT 8419 36 100.0 30 .................................... TTAATGTCTAGGGCTTGCGATATTCTTTTA 8485 36 100.0 30 .................................... TCATTCAAGGTAAATAACGGCAAAATCAAT 8551 36 100.0 30 .................................... CCATTGATAAAGCGGTTCGTAAGACAGTTG 8617 36 100.0 30 .................................... GACAATTCACACAATTCCACAATGCTGATG 8683 36 100.0 30 .................................... TTAGATGAGTTCGAGCAGGTAAGATGTTTT 8749 36 100.0 30 .................................... TTATTATATGGTAAAAAGTTATAAACGTGA 8815 36 100.0 30 .................................... TATATGATGCAGACATTCCAGCGTTTAATG 8881 36 100.0 30 .................................... TCTTCTACGGTTCTGGATACATAATCTAAT 8947 36 100.0 30 .................................... TAACTGGTATCAGCTAATTGAACGTCTTGG 9013 36 100.0 30 .................................... TGATATAGAGATGATGTTGGAACCGGTCCC 9079 36 100.0 30 .................................... AGAAAGGAGCGATAAATAATGGCACAACCA 9145 36 100.0 30 .................................... TTTCGATAATTTCCATTGTTTACATCTCCT 9211 36 100.0 31 .................................... CTCTTTTGCATATTCTCGTCAGCTTCATCAG 9278 36 100.0 30 .................................... TCATATTCAACGTTTCCAACGTCGTGAATT 9344 36 100.0 30 .................................... CTGGTTCATTGCTTTCTTACATGCCCAGTT 9410 36 100.0 30 .................................... ATCAAGAACGCGTAATTACTGAAACATTGT 9476 36 100.0 30 .................................... TTAAGTCAGGTGCATTAATTGACTATAGTT 9542 36 100.0 30 .................................... TAACACAGTCACATATCAGTACAGCAACGG 9608 36 100.0 30 .................................... TTGATAATCGATTGGAACTTGGTTATAAGG 9674 36 100.0 30 .................................... GAAAAATTAGACAGAAAGGACGCCAACCGC 9740 36 100.0 30 .................................... TCCCGTCAAAACGTTCAATTCGGATGATGT 9806 36 100.0 30 .................................... TTCTGGTAAGTTCATTTTGTCAGCAGCTTC 9872 36 100.0 30 .................................... TGGTTTAAATATCTTTGATCATTTTAACTG 9938 36 100.0 30 .................................... GACGAATACGCTATTCTACACTAAATAAGA 10004 36 100.0 30 .................................... TAGTTATTTGTTGGTATAATGTTGCGTCTG 10070 36 100.0 30 .................................... ACTGAGTCGACGTCGCTAGCCAACAAGACA 10136 36 100.0 30 .................................... ACTGATAAACAACGACCAGTAGCTTGGTTA 10202 36 100.0 30 .................................... TGAACAGACTGCGAAGAAGTTGAATGAAGC 10268 36 91.7 0 .................................GTA | ========== ====== ====== ====== ==================================== =============================== ================== 37 36 99.8 30 GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAAC # Left flank : ATTAATTTCGACGGATTAGTGAGTAAGCAAGTAAATGCATTGATAAAGAAAATAGTAGATTATTTAGATAATGATGATATTAACTATATTCAAAAGTGCGTATCAAAATTAAATGATTATCTTCAGGAAAAGCTATTTATGATTGATCTACCACTGAGAGTTACTAAAGATGTTGACTTAAAAAAAGTAATTAAAAATTTAGATATTCATCTTGATTCATCCATAATCAGTAATCCATATGATATACTTGAAATGTTAATAAGGTTAAAAGTAGAAACTAATTCTGTTTCGATTATAGTTTTAAATAATTTAGCTAATTATTTAGATGATGATCAATTGAGAAGCATTCAACAATTATGTAGAGAATCAGAAGTTCCTATTTTAGATATTGAATTTAATAGTGACTGTATTGATAGATTCAAGTTCTGTCAGTACTATTTTATAGATAATGACTTCGTTGATTGGCATAACTAAAATGAGATTTTGATTATAAAACATCG # Right flank : ATTAACAAGATAGGAGATAATATATGAAAATATGTTATTGGAATTGTAATGGTGCCTTTAGAAAAAAATACACTGAATTACTTAAAGAAAAAGCAGATCTTTATATTGTTTCAGAGGTAGAAGATATAAGTAAAATAGATTTTCTCGAAAATATATCTAATAAGCTATATTGTAAGACCAAGGGTGATATAAAAGGAGTGCTGTTTTTTTCTTTTGATTCCTCACCAATTATTCCGGTTGAAAATGATAATTATGGTATTAGATATGTTATTCCTGTTAAATTTAAAAACATCAAAATATTTGGAATATGGGCTAAAGGTGGATACATTGAGGATTTATATACCTATTCCGCAATTAACATTGACCAAATGAAAAATTCAATATTAATTGGTGATTTTAATAGTAATGTTATTTGGGATAAAAAGCATGGAGAAAGATGTCATACTAATTTTGATGCAATGCTTAAGAAAATTAATTTAATTAGCGGCTATCACACAAAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //