Array 1 20916-22616 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBFH01000024.1 Streptococcus mutans strain PKUSS-8 C179, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 20916 32 100.0 33 ................................ TGAAAAGCTTGACGCTATTACCGAGCTTTTGGA 20981 32 100.0 33 ................................ ATCAAGCATACGTATATATGCTTGTGTGCTTAG 21046 32 100.0 34 ................................ AATTTGTTCTTGCGGTTGCGGTGCTGGTGTTCCA 21112 32 100.0 36 ................................ ACTGTCGATTAGTGCTATACATGTATTTGTGTTGTC 21180 32 100.0 34 ................................ ACGTCTGATTTCAGACCAGCCGCGCGGTGCGTTG 21246 32 100.0 34 ................................ TTTGGCTATGACTCATACGGCTTAACTAAAGTCG 21312 32 100.0 36 ................................ TCATAAGCCGTTTGCTTGCTAGCCATTCCCAAGCCA 21380 32 100.0 37 ................................ TGATTATATTATATTATATATATTATATAATGTCAAG 21449 32 100.0 35 ................................ TTGAGGTAGGAAATATTCAATACAGCGGCTACGTT 21516 32 100.0 35 ................................ TTTGTACATCAGCTCTGCTTGCTTCTTATCAAAGC 21583 32 100.0 34 ................................ ACTACAGTACCGCGTGAATTTTCGTCTTTAAGCG 21649 32 100.0 35 ................................ TTGTAGTTCTTATCAAAGGATTTTAGCTGTCTATC 21716 32 100.0 35 ................................ AACCAAGCAATCTTTAGAACTTGCTGAGAAAGCTC 21783 32 100.0 34 ................................ TTGACATCAGAGCTATACGCTCTAGCGTCGTCAA 21849 32 100.0 35 ................................ CAAAAATATGGGCACTAACACTAATACTGCCAAAA 21916 32 100.0 33 ................................ ACCAAACGCTGAAAGATTATCAGCGAAAGAAGT 21981 32 100.0 34 ................................ AACTATTTGAGTGCAGTTATTCAAGTCAGCGGAT 22047 32 100.0 35 ................................ TTTTCTCTTCTCTTACATTTTTATCGTCAACAGTA 22114 32 100.0 35 ................................ TTCTGCTTCGACGTATCTTGACTTTGGAGTAAAAT 22181 32 100.0 36 ................................ CGGTTTGAACAAATCATAAATCCCCCGTATTAAAAG 22249 32 100.0 36 ................................ TTCCTGAGCTTAGTTGAAGCGATTAAACATGGTTCT 22317 32 100.0 35 ................................ AAGAGCACTGCAGATAAAGAACGGTTTAAGAAAGC 22384 32 100.0 36 ................................ ATTTCTTGCACGCTTCTAACAGTAGTGATAAGCGTC 22452 32 100.0 33 ................................ CTGTTGGATTTCAAGCACTCGTTCTTCAAATTT 22517 32 100.0 36 ................................ ACATAGGTGATTATGCGTTGAATTTTCCTCCCAAAC 22585 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 26 32 100.0 35 GTCGCACCCTTCACGGGTGCGTGGATTGAAAT # Left flank : TAAAGCTATTCGTGGAGAATTAGAATCTTATCCACCATTCTTAATCTAGGAGCAAATTTATGATGGTTTTAGTGACTTATGATGTCAATACGGAGACTGTAGCAGGCAGGAAACGACTACGACATGTCGCAAAACTCTGTGTTGATTATGGTCAGCGTGTGCAACATTCGGTTTTTGAGTGTTCAGTGACACCAGCCGAATTTGTAGAGATTAAAAATGAACTCTCAACAATCATTGACCAAGAATCAGACAGCATCCGATTTTATTTACTTGGCAAAAATTGGCAAAATCGGGTAGAAACGATGGGCCGAGATGACAGTTATGACCCCGATGTGGGGATACTGCTTTTATAAAAATTTGTGTGCGAATCTGGGTTGCACATCAAAACCAGAGACATTCGCGCACAAAACCAGAACTATAGTGATAAAAATTCAGTTTTTATTGAGCCAATTGGTTTAATAAATTCTCGATTTTAGTCACAAACGGTGCAACTACGCGCC # Right flank : TAATATTTCCTGCACAACCGAAATGTTATCATCTGTCGCACCCTTCACG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCACGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 2592-1360 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBFH01000031.1 Streptococcus mutans strain PKUSS-8 C165, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2591 32 100.0 35 ................................ TGTTTTCGCTTTATATGAGATACCTGCTCACATTA 2524 32 100.0 33 ................................ CATGTTGATGTATTATAACGCTTATATGTATGC 2459 32 100.0 35 ................................ AAAACATCAAAAGCTTTCGTATCATGTAACTCCAA 2392 32 100.0 34 ................................ ATCTAAACTTGTATCATTATTTGTTAATCCAATT 2326 32 100.0 35 ................................ TTCTTTGTGCTGTAGTACGCAAAATCTGCGTCTGC 2259 32 100.0 33 ................................ AGGTATTTTGGAAATTACTTCTGAAATGTGGGG 2194 32 100.0 35 ................................ AAAAAATGGAAAATGTCTCAACTAATATTTTCAAA 2127 32 100.0 35 ................................ TAAATGCGCGCGATAAGACGATTATCACAACTAAT 2060 32 100.0 35 ................................ TTATATTTCTTAACGACGACGTTTATATTTTGCTC 1993 32 100.0 34 ................................ TAAAGAAGCTGAACGAATGGACACGTTACGCGAC 1927 32 100.0 35 ................................ AGTAAAGGAGATATTAAAAAATGAATAACAAATTA 1860 32 100.0 34 ................................ ACAATCAAATTGGCTTGCGACTGTTTGTAAACGT 1794 32 100.0 36 ................................ CATCAGTCTCCTCTAAACTTCAAACTTCTTAGAGAG 1726 32 100.0 35 ................................ AGTTTCAGCAGTGTATGAAATTCCTTCTAAAATTG 1659 32 100.0 34 ................................ TTGACCATGCCGTTGACAATAGTTGAGAAGCTTC 1593 32 100.0 35 ................................ TTGATTCCTTTATCAATTCCGCGCGGATCTTCGTC 1526 32 100.0 36 ................................ TTGATTTTTTTGGCGCGTGCGGTTTTGGCTGTGCCG 1458 32 100.0 35 ................................ ATTATCATTACCGACAACTAAATAATCACCATAAA 1391 32 96.9 0 ....T........................... | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 99.8 35 GTCGCACCCTTCACGGGTGCGTGGATTGAAAT # Left flank : TGCGTGGATTGAAATTAATATTTCCTGCACAACCGAAATGTTATCATC # Right flank : TGAAATCAATCGCATAGTATATGAAATGAGTTTTGTCGCACCCTTTAAAGGTTGGGTTTGCTTTTTGGTATAATAAAAGTGGAGAATTTTTTATAAAAATGTCTGGCACTGATTTTAACAAAGGAAAGAGTTCGTCCATGAAAGCAACATACAACATTGATAATCCCAATTTACCTTATCAGACCAATCTTGAACTTTGGCAGACAAGTTTTGGTCTTTCAGCAGGTGGATGGCTTAACGCCATCAGCTTATATGGAAGAATTGGCTGAGAAGCAGGCGCATGGAGATTATTCTTATGAATAGGTCTATGAGGAAATCATTGATTATCACAAATCAACGGATGACAGCACGGCTGAGGCTGATTTGGTTTCCTTGCGTATTGCATAGCATCGGGTTTAGCTTTAGTCCAGCTATCTTGCTGACAATTTGGTGTGAACCGTTTCAGAATATTTTTGGTTGTTTCATTCTCATTGGTTAGTTTCGTCAAACAAATATTTCTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCACGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //