Array 1 9103-8340 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAXPR010000001.1 Streptococcus ovuberis strain CCUG 69612 SS2007_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      9102	    36	 100.0	    30	....................................	ATTTATGGTAAAGTAAACGAAACTGATTGG	
      9036	    36	 100.0	    30	....................................	GAGTGTGGCTTCCTGTCGATTTTCTCTAGT	
      8970	    36	 100.0	    30	....................................	GATGATCTCGATACCCTTAGCAACAATGTT	
      8904	    36	 100.0	    30	....................................	TGCTTTTTCAACAGGTTTGAACTTGTCCTT	
      8838	    36	 100.0	    30	....................................	ATAGTTGGCCACGACCTTGCCTTTGAGACT	
      8772	    36	 100.0	    30	....................................	GTTGACAAGACAATCAAATCAACAATGCCT	
      8706	    36	 100.0	    30	....................................	TTTATGCTTTGCAAAAAGAAAATGCGGCGT	
      8640	    36	 100.0	    30	....................................	ATCGATTTAGTATCGATTGGCGCAAAGAGT	
      8574	    36	 100.0	    30	....................................	TATAAGCAGTTTAGGTTTGCGGAAGGCTTT	
      8508	    36	 100.0	    30	....................................	TAGCAGATAGTTCCTACCTCCAGCTTCTGT	
      8442	    36	 100.0	    30	....................................	AGGGGAATATACCAAGATTGCAGAAGCCTT	
      8376	    36	  83.3	     0	....................T....TT..ATC....	|                             	G [8353]
==========	======	======	======	====================================	==============================	==================
        12	    36	  98.6	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGCTCCAAAAC	                              	       

# Left flank :   CAACAGCTTAACAATAAACCAGAGGTCAAGTCAATGATTGATAAGCTATCGTCTACCATCACTGAACTGATTGCTTATGAATGTCTCGAAAACGAACTGGACCTCGAGTACGATGAGGTGACCATCTTGGAGCTTATTAAAGCGTTAGGTGTCCGCGTTGAAACAGCGAATGATACCATTTTTGAAAAATGCTTTGAGATTCTTCAAATTGTCAAGTATTTAGCTAAAAAGAGACTGCTGGTCTTGGTCAATAGTGGTGCCTATTTCAGTTGTAAGGAATTGGCTCGGCTGAAAGAATACATTGACCTAAATCAGATGACGGTACTTTTTTTAGAGCCAAGGCGATTATATGACCTACCTCAGTATGTCCTAGATGATGATTACTTCCTAATCACAGAAAATATGCTATAATAGTGGTTATAAAGGAGCCAGACGAAACTGAAGTCTAGCTGAGACGAACAGTGCGATTACGAAATCTTATAGGCAAAAAAGCCTCCGAG
# Right flank :  GTTTCTGTTGATCTATCCGCTCCCCTTTAATGCTAGACAGTTGGAACAGGCTGGGCGGTTAGCTATCAATCCCGACTACGGCTACGAATTTAGCCATACCCTTGACGCGCAGATTGGCGGTCAGCTGCGTGCTGGATTTGCCGTAATTGATTTTTATGAATCAAAAAATAGCCAGCATCGCCTATCAATTTATGGCAGTGATTATTTGGCCAATTTAAGCATCAAGTTGTAAAGGAGCATTATGCCAGAATTACCAGAGGTGGAGACGGTCAGAAGAGGGCTGGAGCGCTTGGTAGTCGGTCGTCGGATTGAGCGTGTGAGGATCCGCTATCCGAGGCTGGTTGTGACAGACCGTGATGAATTTGTCGCCAGTTTGACTGGTGCGACTATTGAGCAGATGGGGCGTCGGGGCAAGTACCTGCTATTTGGTCTCGGTCAGATGACCATGGTGTCTCATCTGAGAATGGAGGGCAAGTGGTTGCTCTTTCCATCTGACCAAA

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGCTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:56.76%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-4.30,-7.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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