Array 1 182968-180961 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPAJ01000047.1 Campylobacter concisus strain AAUH-9UCdp 1100547, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 182967 30 100.0 37 .............................. TCAAGTGAAAGGTGCTTTTCTGAATTAGGTCATTGTA 182900 30 100.0 36 .............................. TTTCAAGCACTCCGCTTGCGTCCTTGCGACTTATCT 182834 30 100.0 36 .............................. TAGACTGTGCCATAGCAAAGCCTCTCATTGCGAAAA 182768 30 100.0 34 .............................. TTTCTTTTAAGAAGTGAAGCCCAGCTTTTACGTA 182704 30 100.0 35 .............................. GAAAGCAAAAGATACAAAGGGGCTAAGGGCGGACG 182639 30 100.0 38 .............................. ACAAAAGCAATGGTCGCTTTGTTTTGCCGCCTGACTTT 182571 30 100.0 37 .............................. ACCCAAAATATCGACGGGCTAAACGGCGGGGCATTCG 182504 30 100.0 34 .............................. TGATAAAATTGATAATATTCCTAGTTGGTTTGGT 182440 30 100.0 36 .............................. TAATAAAAGACACCGACGACACTATCGAAAACGATG 182374 30 100.0 34 .............................. ACGTTTTCTCCACACCCACGGCGGAGTAGGATCA 182310 30 100.0 36 .............................. TTTTTAGTGCGATCTCTGCTTCTATCGTCGGCTCTA 182244 30 100.0 36 .............................. ATAAGTGATAATAAGGACTACGAACCAATAATTATC 182178 30 100.0 36 .............................. CTTTTTTCTTTATGAAGCCTTTAGGGTCTTTTTTAA 182112 30 100.0 37 .............................. TATATTGGCGCGTTTTGATTTTTAGTTAGCTCCTCAT 182045 30 100.0 37 .............................. ATTACGATTAACTATTATGAAGACGTTGAAGCCTCTG 181978 30 100.0 36 .............................. TCCTTGACATCACCACGCCAAAGAAAAATCTTAATC 181912 30 100.0 36 .............................. TACTCTATAACAACAGCGATCTTGTGGCTTTGGTCT 181846 30 100.0 36 .............................. AAAGTGTTGGCGATACTCTAGCTACAGAAAACAAAG 181780 30 100.0 34 .............................. TTGCTGTTTCGCCTACTTTATATAAATCATATTC 181716 30 100.0 34 .............................. ATAGAAAGATGTAGCCAAGACTTTTTCACTTATG 181652 30 100.0 37 .............................. GCGAGATAAATGGCGTAGCGGTCAAATGTCGCCCTGA 181585 30 100.0 35 .............................. AGTTTAGGGCAGATATAGCTAAAGAAGAGCAGTTT 181520 30 100.0 37 .............................. CGAGTATCTGAGAATAGATCGATCTCGTCTGAGTATT 181453 30 100.0 40 .............................. TGTGGCAAAAGTAAAATAATCCCTATCTACAATCCAGAAT 181383 30 100.0 35 .............................. TGCCCTATCGTGATTTTTCTACGTGCTAGAAAATG 181318 30 100.0 36 .............................. TCGACTTTTAATATAATGCTCTCACTCGCGTTTGCG 181252 30 100.0 36 .............................. TCGTAAAGCGATCGTGCAGATATACCTAGCTCCTTT 181186 30 100.0 35 .............................. TCTCCGATAATGTAGAAAAAATAAATAGCGTAAGT 181121 30 100.0 36 .............................. CAAAATAGAGCCGACCGACAGCGACGAGGAAGTAAG 181055 30 100.0 35 .............................. AGATAAAAGAAACGAGCTAAGATTAAAACTCAATC 180990 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ======================================== ================== 31 30 99.9 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GCTTGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGATCTAGCGGAGATTTTTAAGCCGATCTTGGGTGATACGCTTATATTTAATATGCTAAATAAAAAGGAGATCACCGCAAAGGACTTTCAAACGGACGCTGGCAGGATAAAATTTAGCAATGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGTGAGACACTCACGGTGGGCGACAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAACAAACAAGCTCAAAAAGTGCATCTGTGAGGACGCGCCTTATGAGGGCTTTAGGTGGGAGTGAAATCGCATTTTGATAAAGCGTTTTTTAAGATTTTAAAATGCTTGAAATTTAGGGCTTTGCATATTTATATGTAGCTAAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAATGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : CCACCAAACATGGTTGGCGACAACCACAATCACTCTTTTGATAGTCGTTTTTTCGGGGCAGTTCCATATAAATTTTTAATTGGTAAAGTTAGATGGCAGCTGTTTTAGCACAAATTAGCAAAAACCTTGGCTAAAGATTATAATGAAGCAAATTATCGGATTAATGAAATTTAAAAAAGGTTGTGAATTTTTTGTCAACTATAATTAAAACAAAAAATATATGAATTTTTAAAACCTACTTGTAAAAACAAGCAGGTTTTAAAATGTTTTATTTCTCTAGTTTTTCTTTTTTAGATTTAGCTTTTGAAACAGCTTTTTCTTTCTTTTCTTTTACTTTGTCAACAACTTTGTCTTTTTCATCTTTTGCTTTTTCACTCATACTAGTTTCATCTTCTTTATTAGAAGTTAGCTCTTCTTTAGTTTTAGAAGCTTTCTTTTTAAATTTATCTTTTTTATCAGAGATTTTTTCTTTCATCTCGTCTTTTGCCTCATCCATTTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //