Array 1 22354-22505 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_017945.3 Corynebacterium pseudotuberculosis 258, complete sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
     22354	    29	 100.0	    32	.............................	TAGTGACCTGGGGGCGAAGTATGTAAAGCCTC 	
     22415	    29	 100.0	    33	.............................	CCGAAGTGCTCGATAGCCAAGGTGCGTAGTTGG	
     22477	    29	 100.0	     0	.............................	|                                	
==========	======	======	======	=============================	=================================	==================
         3	    29	 100.0	    33	GGAACTACCTCCGCATACGCGGAGAAAAG	                                 	       

# Left flank :   AAGAAAGAAACTCACGCTTAGCTTCGACATCAGATACAACGGCTTTTTCCTGCACCAGTCCTGCTAGGAATTCCTCGAGCTCAAAATCCTGTACTCCAGAATCTCCGTATCGGACAGACACCGATGGCGTCGCTTCAATACGCGTGATTGCGTCATAAAAATCCATCATGCCTCCTTCAACGGGCCCTTGATATTTTTCCGTCATCTGTGATTGGCGATACTCCATTCCCGGAAATCGGGTAAAGCGTCGCAATTCTGAAGTCGTATTGAGAGGCATCTTTCGCTGGCCCAAGTACGATTTCTATCGTAACGAATTTTCCGTCTGGGCCTTTAACTCGTGATCTGATTCTACGTCCCGTCCTAGTTACAATGACGGCCTCGGGGGATATCAGTGCTGCCTTCAGCGGTGAGGGCTCTCCTTCGAGCCAAGCTTTCAAGATATCTCGGCCGCTCTCGTAAGGAGGAAAGAACGTCTTCTCTCCGCTAAATACTGCCTCTGG
# Right flank :  GACTAAATAACCTGCGCGTTTACTCACTCTCTGGGCAAAAATCCTCCAAAACTTCGTCTGGAATAATTGCATCGGCTTCATCCAGGGGGTCAGCAAAACGCACATCTTCTATTAGACCACGAGCAGAGAGGAAAAGGCCATCCAGATCAACGACAGGACGGCGTTGTTTTCCTGTTGTGCGGATTCTGAACCCTTGTTCAGCATCATATTGCGGGTGGATCAGAGTAAGAGATCCCGCTAAGTCTACAGATTGGCATTTTTCCCAAAGATTTTCCATGACAGCCCTGGATAGAACTCCTACATAAAGACCTGCGTCTACTTCAGAAAGGAAGCGGCTGAGGTAGCCGTTGAGGTGGTTCGGAAGGTTATGCCCTTGAATGACCGCAAACATTTATTTACCACCGTATTGTGTGTGCCCTGGGACTTCGCGGTTCCTTCCACCGATGAGTCGGTCGTCGGTACGCTCGGGGAGATACGGAGCGAGAATCTCCATCATAATG

# Questionable array : NO	 Score: 5.67
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGAACTACCTCCGCATACGCGGAGAAAAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [10,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-10.20,-10.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//


Array 2 1843103-1843254 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_017945.3 Corynebacterium pseudotuberculosis 258, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	============================	===================================	==================
   1843103	    28	 100.0	    33	............................	CGTGTTCGCGTGGAATATCTGCGGCTAGTGCTA  	
   1843164	    28	  96.4	    35	.................C..........	TGGGCGACCGCCCTGCGTCTGCAGGTTATATTCCG	
   1843227	    28	 100.0	     0	............................	|                                  	
==========	======	======	======	============================	===================================	==================
         3	    28	  98.8	    34	CTTTTCTCCGCGCACGCGGAGGTAGTTC	                                   	       

# Left flank :   GCCTCGACCCCTGCGAAAACCGCTAACCCTAGAAAACCTCGAAACTGAGACTGCTCAACATCAAGAATTTGCACACCATTAGCGGCCAAAACACGAAAAGCTGCTGCCGACACCCCTTGCCGATCCTGGCCGGAGATCGTAATAACAGCCGGGGTTAACTCTGGGCGAAGACTAACAGTTACTTGAGGCTGGTCCAGTTCAATCACCGATCTATTGTTGCACGAAAGCCCTTCAATTCCTCCCGGCGCTCCCCTCTGTTTAGCGATGCTGTTTACTTTCCTAACAACGAATACATATCTTGAGCATCTATTAAGTTTCGTACCCTCAAGTCTGGTGCTTGCTCTGCTCATTGTGGGGGTGAGTAATAGGACCTCTCAGGACAATCATGGTCTAATAAAAGTGCACTTTCGCACCGACGACGAGGAGTTAATGCGATGATTCCAAACGCAGTTTGGGCTGTTTTAGCCCTTTCCGACGAGTAAAAGTGCAGGTGAGTTAGC
# Right flank :  CGGATCATCAAAAAGGCAAGAAGCTAGAGCATTGGCATTGGAAGTAATGGCTCAGCAAATCCGCGATCAAAAAATCCTTTCCTCGGCTGTCGAAGAAATTTTTCTTTCTCTCTTGGATCGGCAAACTGCTGAAGAACGAGCGGGGGCTGCTATGCAAAAGATCCTTGATTTGGGAAAGCCTCATTCCTTCCTCACATCTTCTTTTTCCTTAAGCACTAAAGAAGTTTCTGCTATGTTGAAAGCTTCCAAGAACTCTGACGAAAACAGATTTGAACAAGCAGAAACGAGCACTGATGACCATGATGAATCCCACTGAGCGCATTAACAAAGACCAATTACGGCAGATTCGCAATGATCTAGCAAGCGCAGAAATCGAGGGTCAATCAAGAGCTCCAGAAGACGAAAAAATCCTTGCCGCTTATTATCTTGGTGAAGTTAGCGAACAAGAATCTTTTGAATCGCTTCTGAAAGCTGCAGGAGTTCACCCCCCTTACCCATCA

# Questionable array : NO	 Score: 5.30
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTCTCCGCGCACGCGGAGGTAGTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-10.90,-10.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.37   Confidence: MEDIUM] 

# Array family : NA
//