Array 1 20-517 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZEX01000061.1 Latilactobacillus fuchuensis DSM 14340 = JCM 11249 strain DSM 14340 NODE_106, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 .................................... AGAGTAGTAGGAACTATTGAACGTCAATGG 86 36 100.0 30 .................................... TCTTATTACACCTATCAACTTACACGCCCT 152 36 100.0 30 .................................... TTAGTTTGGCAAAATCAGAACAACAGCACT 218 36 100.0 30 .................................... TAAATTGTTCTGATTTAATGTTTATGTTAT 284 36 100.0 30 .................................... CATTGCAACCGGTAATATCAACGTTAATGG 350 36 100.0 30 .................................... TAATTGTTTAAATCTGTTACTCTATAAAGT 416 36 100.0 30 .................................... ACATTGAAAGCGTGCGCGTTACCAGTTGCA 482 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 100.0 30 GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Left flank : CTTTATTCACGCAACTTGAG # Right flank : TTGAATATGCAATGACCATCGACACGGCTTGCTCCTATCCTAGTATTTGGTACATAAATTTCTGAACAGTTGTGCCATAATTAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 14855-15156 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZEX01000021.1 Latilactobacillus fuchuensis DSM 14340 = JCM 11249 strain DSM 14340 NODE_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ============================ ================== 14855 38 100.0 28 ...................................... AGCTTGCTGTCCAGTAGTTCCAAACATA 14921 38 97.4 28 .T.................................... CGCTAGTATTGGTAGTGGTGCGTTTCAT 14987 38 97.4 28 C..................................... GACCGCTGTTTCAAATTAATCGAAGAGT 15053 38 100.0 28 ...................................... TTTGTGTTAAATTATTTAACGCTTCAAT 15119 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ============================ ================== 5 38 99.0 28 TAGTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Left flank : ACGCCCCAATTTAATCAAGCACCAGCCCAATGCAAGGATATGGCGTGCTGACATTACTTATTTGGAATTACGTCCAGGAACCTGGGTTTATCTCAGTTCTATTTACGAACCAAAGGTTCATCAAGTTCTTGCTTTCAAGATTGGTCGTCAGATGGAGGCGACGTTAGTTGTAGAAACGATTAATCAGGCGCTTGAATGTCATCAAAAGCCACAATATTTTCACTCTGACATGGGTTCACAGTACACCAGCAACGAAGTTGAAACTTTACTTGAACGGCATCAGATTAGCCACTCATACTCAAAACAAGGTTATCCTTATGATAATGGGCCAATTGAAGCTTTTCACTCATTGTTGAAGAGAGAGTTTGCCTTTCAAACAACTTTTTCCAATTTTGAGGACTTGGTAATCCGAACCTCAAATTACATCAGTTGGTTTAATTCCGACAGAATTAGAACGAGTGTTTAGAAAAAGATGTGCCATTTATTGACATAGGAGCAGC # Right flank : TTTCAACGACTGAGATTAA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAGTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 433-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZEX01000005.1 Latilactobacillus fuchuensis DSM 14340 = JCM 11249 strain DSM 14340 NODE_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 432 36 100.0 30 .................................... AAAACACGGTCTCGCCAATCGAAATGTTTC 366 36 100.0 30 .................................... ATATACCAAACATAATCTCAGCGCGCGTAA 300 36 100.0 30 .................................... ATTTTAATAAGTTTTTTTGGTTTGGTACGT 234 36 100.0 30 .................................... AAGACGATTTAGCATCTACCTTTAGTCCTG 168 36 100.0 30 .................................... CAAGCCAATACCAATGCGATTATTGCCGGC 102 36 100.0 30 .................................... TTTGGCGTCGGCTTTATTCACGCAACTTGA 36 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Left flank : | # Right flank : C # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 715-19 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZEX01000047.1 Latilactobacillus fuchuensis DSM 14340 = JCM 11249 strain DSM 14340 NODE_66, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 714 36 100.0 30 .................................... GCGTTCGCTTGCTTCGTACCCCTTTCCCGT 648 36 100.0 30 .................................... TGTCGTTATTAAGCTGTTACTAATTCACGT 582 36 100.0 30 .................................... TTCGATGCATAAATTTGAGCACCTTTACCA 516 36 100.0 30 .................................... CATACGCTGAAAATAACGTTTTAGCAATAA 450 36 100.0 30 .................................... TACTTCACGCGTAGTAATTTCAAGTTGTTG 384 36 100.0 30 .................................... CCACCAGATGACGGAAACAGTGTAGGCTTG 318 36 100.0 30 .................................... CGTTGGCAAAGGCTAAATCTGCTTCAGATT 252 36 100.0 30 .................................... GCGATTGGATTAAAACACTAATTATTAGTC 186 36 100.0 30 .................................... TTGTTCATCACTTCGTGGTTGCAGTTCGCT 120 36 100.0 30 .................................... TGAGCATAACAGCTGGCACCATCAATGCGA 54 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 100.0 30 GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Left flank : ACGCTAGATCCCAATAAATTATTTCAAAGCCGTTTGATTAAAAAAATGGCGAAGGATTTAACGGATAATCAGCGTCAAAACTTAATTAAGCTTGATAGTCAGATGCGGGCCGCTATTTTAGAGGCTGCTTTTATGTATGATTTAGCGCTTGATATTGATTTAGAGTTGGACGTTCAAAAAGCGCTAAAATACTTTAATTTAAAGTTTTCAAATGATATCCAAACCGATCCCTATGGTATAATAGAGAGTATAGTATTGACTGCTTCAGAATTAAATGAAACTAAAATTATTGTATTGATGAACGTTTCTCATTATCTTAGTATCAGCCAATTTAATGAATTGGTAAGATTAATGGCGACGTTGAATGTGAAACTCTTTATCATCGAATTTTCAGAAACCTCAAATCCGACTAGGTACCAAGAATGCCGGTATTATCATATCGACGCCGATTATGTCGAGTGGCGTTATGATTCAGATGAAGGAATGATGAAAAAATAACG # Right flank : CAAAACACGGTCTCGCCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //