Array 1 1137691-1142354 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN555523.1 Romboutsia ilealis strain CRIB chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1137691 29 100.0 37 ............................. CATTGGCAAATACAAGACAATCTCAACATTTAAACGT 1137757 29 100.0 37 ............................. CGTAAATTATTCGCTCTAGCAGATATTCATAAGCAAG 1137823 29 100.0 37 ............................. TTTATAGTTACTGAAACATCCTTAGTTGCACTAGAAC 1137889 29 100.0 37 ............................. AAGTTTATCCCCACACTAAGTTCTAATACGAATTTCA 1137955 29 100.0 37 ............................. TATTTCATCTATAACTAATTTATCAGAAGTTATAGTT 1138021 29 100.0 37 ............................. TCAAGGGTATAATCATCATCAGTAACTAACCCTAACT 1138087 29 100.0 38 ............................. GGTAATAGAACATAACAAAGTAATAGACAAGGTTTCAG 1138154 29 100.0 37 ............................. ATAGCTTCTAATACATTAGCCATACTCATACTATAAT 1138220 29 100.0 36 ............................. TACCACTATTAAACTTATTAACTACGTTATTTAAGA 1138285 29 100.0 37 ............................. TTTTCTTTTGCTTTTAAAAACTCTCTTTCTATCCTTG 1138351 29 100.0 37 ............................. ACTATCAAGCCTTGAAGCATAAGTTACAGTATCAAAA 1138417 29 100.0 37 ............................. TTAGTTACATACTGGCATAAGTTTTCAACGTGTTTTC 1138483 29 100.0 37 ............................. AAAGTTTCAATAACCCAACTCGGCAAACTTAATTTGT 1138549 29 100.0 38 ............................. TTTCTTATTTTGTTAATTCGTTATATAACTCTCTGTTT 1138616 29 100.0 37 ............................. CAAAACGAAGAAAATTATGCAAACAATTTATTGGAAG 1138682 29 100.0 38 ............................. AAAAGTTCCTTATAAGCTTCATATTTGCACTCGCTACA 1138749 29 100.0 37 ............................. ACAAAGGAAAAGATGTGTTATGACTTAGGAATAAAAA 1138815 29 100.0 38 ............................. ATTATATTTGAAATCATTTTTACAATTAATATCATATA 1138882 29 100.0 37 ............................. TATAATCACCATTAATCATACAATGTTTATTACAAAA 1138948 29 100.0 37 ............................. GTTTTTTAACTCCTAATATATCTAAATCTGTTGCAAC 1139014 29 100.0 38 ............................. TGATGATTTATCTTTTTGTACAAAATAGTATGACAATC 1139081 29 100.0 37 ............................. TTGACTTTTAAATGTAGATGTGGAAAAGAATTTAAAA 1139147 29 100.0 37 ............................. ATTTTAACTTCATCTAATCTATTGTTCTTCATTCTAT 1139213 29 100.0 37 ............................. TATTTTAAAACTATTGAAATTTCAAGCATTCAATGTT 1139279 29 100.0 37 ............................. CACTTAATAGTAAAAGTAGTATCTGATAATTTAACTA 1139345 29 100.0 38 ............................. CAATATGTTCACTTGTTAATGCTGAAAAATCTTGTGAT 1139412 29 100.0 37 ............................. AGAATAGCAGGATTAATAGCAGGTACATCTTTAAAAA 1139478 29 100.0 37 ............................. TACATTTAACCCCCCTATCTTTAGAATTTGGATCTAA 1139544 29 100.0 37 ............................. CTACACACATATAAAGGAACATTAGTAGAACTTTCTT 1139610 29 100.0 37 ............................. ATAGGGGAGAAATTAGTAACTTTTGGTGGTACTGCTA 1139676 29 100.0 37 ............................. AAAATTGAGTGGAGAAAAATAAACTGGAAAGATAAAC 1139742 29 100.0 38 ............................. ATATAATAAATTAACTATGTATAAATTCCTCCAAACTA 1139809 29 100.0 36 ............................. GTTACAGATAGAAGTCTTAAATTAACATTGAATAAA 1139874 29 100.0 37 ............................. TCTATTGGTTTTAGTGACGTAGGAAGAACTGACGCAA 1139940 29 100.0 37 ............................. TTAGGTATTTTATATCTTTATTTATTCTATCTATTAT 1140006 29 100.0 36 ............................. GAGGATATCTTACCTACTATCATAGCACCATTAGTA 1140071 29 100.0 36 ............................. CTAATTTATTTAGTGCATTTCCAAAAGTCGGAGCAG 1140136 29 100.0 38 ............................. ATGAAAGTGGGAGTGCGAGTGATGTCTACCAAAAACTG 1140203 29 100.0 38 ............................. CACCTTTGAGTAAGTACCTTAGAAATAGAATAAATCAA 1140270 29 100.0 38 ............................. CAAGTGATACTAGATAGAGATGGAAATTTAGAGAAATT 1140337 29 100.0 37 ............................. CTAAATATCCATCTCCAACTTGCACCTAAATCTCTTA 1140403 29 100.0 37 ............................. TCTTCCAACGATAAAATAGTTGATAAACTAACTGAAA 1140469 29 100.0 37 ............................. TATCAAGAAGATAAATTAACTATTTTATCGCCTGTAC 1140535 29 100.0 36 ............................. AGTTGCAACTTTTGTATTTTCTTCACTTGTAAATAC 1140600 29 100.0 37 ............................. ATTATAACATGTCTGGTTCTAGTTGCTAGTATTGTAA 1140666 29 100.0 36 ............................. TCAATGTGTGGAATTATGTGGGTCAATGGCTATCTC 1140731 29 100.0 37 ............................. CGTATTAAACGTGATAGAGAGTGACGAAATAAAACAA 1140797 29 100.0 38 ............................. TAGTAACAGTAATATAAATGTAAACATACAAACTACAC 1140864 29 100.0 37 ............................. AGTATATCATCAAAGCTGTTCCAATCTACAACTTGAG 1140930 29 100.0 38 ............................. ATAAATTTTCTGTTTGTGTTCATACAAGCGACACCAGT 1140997 29 100.0 37 ............................. TATCATAAATACATCATCAATTATTTTCGTTTCGATT 1141063 29 100.0 38 ............................. GCTTATTGGAATTGGCATTTAGTAGAAGGCAAGAAAGT 1141130 29 100.0 37 ............................. TCTTCCATATGGTTCAAGTTAAAAGCTGATAAAGGAG 1141196 29 100.0 37 ............................. AACTATTAGATGAAACAAATGATGAATTAAGAACAGA 1141262 29 100.0 38 ............................. TGTCTATAAATGCAGAGGAGTTTGCAGATTTCTCTAAA 1141329 29 100.0 37 ............................. GATGCACCATTTAAAGTTGCCAGAAATGATGAAGGTA 1141395 29 100.0 37 ............................. GTACCAGACAATGGTGGAAATAGCGGAAATGATAATG 1141461 29 100.0 38 ............................. CATTTCATATCTTTCCCAAAATGTTAAAGACTTTATTT 1141528 29 100.0 37 ............................. GACGATATCATATCTCACATAGGATACGATTTACATA 1141594 29 100.0 37 ............................. GTTGCAGGCACACTTGGTATTAGTATGGAAGAAACTG 1141660 29 100.0 37 ............................. TTAACTTTGTATCAGTAGCCATTTGACCTGCTACTTT 1141726 29 100.0 37 ............................. AAAGACTGTATCTATAAATGTGCTTAAAAGTGAACAT 1141792 29 100.0 38 ............................. TAAGGAGGGTCGCATATTATAGCATCTACTACAACACC 1141859 29 100.0 37 ............................. CGGTGTTAAATTACCTGCTCCGCTTTTACTAAATACA 1141925 29 100.0 37 ............................. CATTATTTGACATTCATTGTAGTCTTATAAGGTTTGA 1141991 29 100.0 36 ............................. CCGTCTATTAAAGCATCTATACAATCAGATATAACA 1142056 29 100.0 38 ............................. ACCTAACATGCAAGTAAGAGTGATAGCAGGTGCAACTC 1142123 29 100.0 37 ............................. CAAGTTAACGTAGGTGGTACTGTAAGAACCTTATATC 1142189 29 100.0 36 ............................. AGCAATTAGAATACCTAACATTGATTTGATAGGTAA 1142254 29 100.0 37 ............................. TTTAAAAACTATTCATTTTGTCAGTATTCAGATTATA 1142320 29 96.6 0 ..................T.......... | AC,C,G,A,T [1142335,1142338,1142344,1142347,1142349] ========== ====== ====== ====== ============================= ====================================== ================== 71 29 100.0 37 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : AGCATTTCATAAAAGATGAAAAATATAAAGTATTAAAGGCATGGTGGTAATATGTTTGTTATAGTAACTTATGATATTGTAGAAGGAAAGCCACTTAATAGGACAAGAAAGATACTAAAAAAATACTTAACTTGGACTCAAAATTCTGTATTTGAAGGTGAGATAACAGATAGTAAATTACATAAGTGTATGAGTGAGATAGAAAGTATTATAGACAAAAAAATGGATTCTATATATGTTTATGAGATTAAGAATCCTAAAAATATTGAGAAGAAGTTATATGGTGTGCATAAGAGTTTTGATGAGATGTTTTTATAGTTTGCAGTGAGCGATATATATGATAAAATTGTATGTAAGCATTATAAATAGTGTAATTGAAGTAATATTTATATAATTATTACTTTCCTTATTGCAACTTTACTGCAAAATAAAGTGAAAAATTTAGACTATTTTAATTAAACTCTAGAGATTTCAATGTATAGAGAATTTTAAAAATTGGG # Right flank : TATGATTATTGAAAATACTAGAGAAAAGGTGTTGATTATAATATGCCAACTCAAAAGTCTAGTTAAATATGATTATTGAAAATACTAGAGCCTAGTAAACTATAGTTTGATAGTTCAAAAACTTTATACAGTAATTTCAATATGTTTAGCAAAATAACTAGCACAACAGATTAACTAGTTATAAAACCGGATTATTAATAGCATTAAAATAAATTAACAATATAAACATATATTTTGATATCATTAGTGTAATAAATCATTTAAATATTAGAAAATTTTACTGTAAAATGATAAAATAACAGGTACAATATTCAGAAAGCACAGAAATAGTAACTATAATTATCCCAAGGATATAAGAAAATTGATATTTAAAATTAGAAGAAGGATAGAAGCTAGTTTTTATTCATTGGCATAACAATTAAATTTGAATAAAGTAAAAAGTAAATCAATGTTAGAGCTTATAACTAAAACTTCAATAAAAGTTTTAGTTATCATATACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //