Array 1 145192-146010 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CEDR01000021.1 Streptococcus suis strain LS2K, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    145192	    32	 100.0	    34	................................	TTAATAAAGCGGTCATTCTGTAGCTGGTCCTGAA 	
    145258	    32	 100.0	    33	................................	CCTTGAATGACAGATAAGATACTTGTTGCAAAC  	
    145323	    32	 100.0	    35	................................	ATCCTTACACGACGAATTGCAAAAAGAATATTACC	
    145390	    32	 100.0	    33	................................	TTACAGGAACGGCAGACTTCAGCGGGTCGTGGC  	
    145455	    32	 100.0	    34	................................	TTGCCACACTCGATAACCATATCTCGCTGTTGCC 	
    145521	    32	 100.0	    33	................................	ATGTCTCAGCGGATGAGATTACCTTTGACCCTG  	
    145586	    32	 100.0	    33	................................	ATGTCTCAGCGGATGAGATTACCTTTGACCCTG  	
    145651	    32	 100.0	    35	................................	CTCCTACTGCACCTATTGAAACATGTATCTTAGCG	
    145718	    32	 100.0	    34	................................	GGCTCCAGTCCTCCACCTTGCATGGCGTTTAAAC 	
    145784	    32	 100.0	    33	................................	TTTGAGCGTGGTTTGGCATCTCGGGAAGAAATT  	
    145849	    32	  96.9	    34	......................A.........	AACGTATCGACAGACTACCTGCTCGGACGGACCG 	
    145915	    32	  84.4	    32	.......T..T....A.....C..G.......	TGGACGGCACTATGGAAACACCTGGCACATCG   	
    145979	    32	  68.8	     0	....T..T..TTG..TA.A...A.G.......	|                                  	
==========	======	======	======	================================	===================================	==================
        13	    32	  96.2	    34	GTCGCACCCTACACGGGTGCGTGGATTGAAAT	                                   	       

# Left flank :   CAAAAGCTATTCGAGGCGAGTTGGATAGCTATCCTCCGTTTATGATATAGGAGCTATATTATGATGGTATTAGTGACCTATGATGTCAATACAGAGACAGCAGCTGGACGAAAGCGGTTGAGAAAAGTAGCCAAGCTGTGCGTTGACTTTGGTCAACGTGTGCAACATTCTGTTTTCGAATGTTCAGTCACTCCAGCAGAATTTGTTGAAGTAAAGAATAGATTATTGGAAATCATTGACAAGGAACAGGACAGTATCCGCTTTTATATGCTAGGAAAAAACTGGCAAAATCGTGTGGAAACGATTGGGGGAGATACTAGTTATGATCCAGATCAAGGAGTTCTTCTGTTATAGATTATCTATGCGAATCGGACTTACTCATTAAATGTGAGGAGATTCGCGTGAAAAGCATATGAAAAAAAGTGAAAATAGAGTGAATTTATGGTATATTCTATATTTGTAGAAACTTTATTTTTTACAAAACAGTGTCAAAAGGCACT
# Right flank :  TTGTTTTTTGCTTAACACAGTATATCTGGTATGGACGTGTTCGAAGTTTCCCTCCTTTAACTCATCTCCCCCACAATTTTCTAAAATTCTTGTTTTGTCTTGCTTGCTTCATGCTATAATAGTTGTATCAGTTTTTTAAAAGGAGACAAAGATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAATTTGTGACGGACGGGATGATTGTTGGGCTGGGAACTGGTTCGACTGCCTACTATTTCGTGCAGGAAATTGGCCGCCGGGTTGCAGAAGAAGGGCTACAGATCACAGGCGTAACGACCTCTCATGCTACGGCAGAACATGCTGCGTCCCTTGGGATTCCCCTAAAAAATATCGACGAAGTCGAATATGTGGACTTAACGGTGGATGGAGCAGATGAGGTTGATGGAGACTTCAATGGGATTAAAGGCGGTGGTGCAGCGCTTCTCATGGAGAAAGTGGTAGCAGTCAATAGCAAGGACTGCATCTGGA

# Questionable array : NO	 Score: 9.07
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCCTACACGGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [7,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-4.90,-6.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-16] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.68,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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