Array 1 59695-60022 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHOP01000050.1 Enterobacter hormaechei strain ENT634 Ent634_S53_R1_001_contig_49, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 59695 28 100.0 32 ............................ TTACAGAAGCCACCAAAGGATAAGGGAGATGG 59755 28 100.0 32 ............................ ACCCGCTACCAAAGCACTCAGCCAAAGACAGA 59815 28 100.0 32 ............................ AGCGTGTTCTTGAATCCTGCCAGACCATTAAC 59875 28 100.0 32 ............................ TCTAACTGCCAGACTTCCTGGCTTTCTCCCTC 59935 28 100.0 32 ............................ TACGGCGACACCGACACGCGCCAGCGTGTTTT 59995 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGGGCAGGCAGCTTAGAAA # Left flank : CAGGAACCTGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACTTCTTCATGGCGGGTGGGCATCCACTCAATAGTTTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAATCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACAGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTATTCCTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGAGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGGTGCATAAGTTGTTGATTTTATATGGTTAGGCTGAAGGGGAATAAAAAAGGGGTTGGAGGGAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGATGTAGATTGCTTCA # Right flank : TCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 17116-17985 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHOP01000056.1 Enterobacter hormaechei strain ENT634 Ent634_S53_R1_001_contig_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 17116 28 100.0 32 ............................ TGATGCAAGATAACACCGCCACTATGACGATG 17176 28 100.0 32 ............................ TCCATTATACGCATTGGGCCTAGTACGTCAAA 17236 28 96.4 32 T........................... CTATACCGCGGGCGGTGATTATTTCCCTTTTC 17296 28 100.0 32 ............................ GCACTGTTTAATGATCAACGGCCTGTAGCGTT 17356 28 100.0 33 ............................ CATTGATCGCACAAAGAAACTTCCAGATGGAGC 17417 28 100.0 32 ............................ TGCGGTAATTGTCGGTACCGGTTCAGTGACTT 17477 28 100.0 32 ............................ TCGTCAGCATCATCAGGCGCTTCTGAGGGCTT 17537 28 100.0 33 ............................ TTCGCCAAAGCGCTGGCCGTCCATAACGATGAT 17598 28 100.0 32 ............................ TTGCGGGGTGGCGGGATTCCGAGCACCCGCAT 17658 28 100.0 32 ............................ CATGCCGCGGAGTAACTAACGTGATATCCCTT 17718 28 100.0 32 ............................ CATAGCCTTGCTGATGATTGACTCAGCCCATT 17778 28 100.0 32 ............................ GATAACGATCCCCCAGACGACTGAAGAGCTCA 17838 28 100.0 32 ............................ TCTATTTTCCCAGTCAAGGTAAACAGATAACC 17898 28 100.0 32 ............................ GCAACCGCATTGGCCCTGCTTATCACCATGTT 17958 28 71.4 0 ......CA....A........A..CTCC | ========== ====== ====== ====== ============================ ================================= ================== 15 28 97.9 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGAGTGATTTCCGGGTGGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGGCAATGAGTGGCTGCTGGAAGATACTGAAATTAAGTGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGTTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAGGTTTAGTGTCGTGCGTCGGGGGAGGGGCTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCCAAACATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAACTCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATGCATTAAATACGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAAAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 27463-28154 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHOP01000056.1 Enterobacter hormaechei strain ENT634 Ent634_S53_R1_001_contig_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 27463 28 100.0 34 ............................ CTGCATGACTGGATATCCATTCCGGTTACTGCAC 27525 28 100.0 32 ............................ CCACATATGCATTCATCTCACCGGTGCGCATC 27585 28 100.0 32 ............................ TCAGGCTGGCAATACATCTTCGGCATTGTCGG 27645 28 100.0 32 ............................ TTGCAAATCGAAAATGCGGGACTGTTCAATAT 27705 28 100.0 32 ............................ CGTCGGAACGGCGCATCGCTGCTGCGGCGGCT 27765 28 100.0 32 ............................ AGACAAATAGTGTCCGTTCACTCTGCGGGTGT 27825 28 100.0 32 ............................ TAGTCACCCAGCGTTTGATGCATTACGGTGCG 27885 28 100.0 32 ............................ AAAAAAGCGATTACGCCGTTCTTCTATCAGGA 27945 28 100.0 32 ............................ GATTATCGTTTCAAGCTGCGTGACGCTTATTT 28005 28 96.4 32 ........T................... CACTCAATGCCCATTTGCACAAATGAGTTAAT T [28011] 28066 28 100.0 32 ............................ TTCCTGCGATTGCTCTATGGCGCGACGAGTGA 28126 28 85.7 0 ...........A........T...T..C | T [28146] ========== ====== ====== ====== ============================ ================================== ================== 12 28 98.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAGCCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGCCCAGAATGTAATATATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGATATGATTTAA # Right flank : CATCCAATGCAGCAGTACTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAATCCGAAACCCAACCACTCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //