Array 1 3598-4490 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAGK01000009.1 Oceaniglobus ichthyenteri strain YLY08 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3598 36 100.0 30 .................................... CGACACGGTGATAATCTGCCGACCGTAGCA 3664 36 100.0 30 .................................... TCAACGGAACGGACCCCGACATCAGCCATC 3730 36 100.0 30 .................................... CCAGATCGCGGGCCGATGCCAGAGAGAAGG 3796 36 100.0 30 .................................... CTGGGCGTTGTGTCATGAGCCGCCGCCGCA 3862 36 100.0 29 .................................... GCCCGCCCGCGCCAGCACACCCAACGGGT 3927 36 100.0 30 .................................... TCAGCGAAATCGAAACCGGCAAGCGCAATG 3993 36 100.0 30 .................................... CCCCGCACCAAACGACACGCGCGGGTTTCT 4059 36 100.0 30 .................................... GCATCACGACAGCACAACCATCATGGGACA 4125 36 100.0 31 .................................... GACAATTCCGGACTTTAACACAAAGAATGTC 4192 36 100.0 30 .................................... CCGGGACAACTGCGAAACCATTTCGCGTAT 4258 36 100.0 30 .................................... ATGGGCAGGGCCGATACATGGTGCATATGT 4324 36 100.0 29 .................................... TAACGTTTTCCGCACTGCCCGCCGGATCG 4389 36 100.0 30 .................................... GGTTTCTTTGGGGAGGGCAGCTCTATTGGA 4455 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 14 36 100.0 31 GTTGCGGCTGGACCGCGGATTTTGAACAGCTACAAT # Left flank : GGCAAATTCAAGATCAGTTGATCAGAGAAAAAGGGCGGCTTTGTGTTTAGCCGCAAGCACGAAGCGTTGGTACGCGCCGCCGTTGGCATGGACGAAGCAGGCGCGGCACCGGAGGCCGAAACCGACGCTATCAAGGCCGACCACGGCCTGTTGGACGGATACGAGCGCCTTATGGTTGGCGGCGAACCATCCACAACCCAAACCCGAACGTCGTCGAAGTTTTCCGCAACATGATCTCAGTGCAGAGTTGCCAGTTTGCCCGTGAACCGGCCGGCAAGACCTGCCGCGTCACTCGGCTTTGCGGGTATTGAATCCCATCAAGCCTATCAGACGACGCACACGGTGGTCGGCCGCGTGGAAGCCGTTTCTGGGCAAGTAGGCTGTAATCTGAAGACTACCAAAGAACGGGTGCTTGGTGAACACCCGGCCGATCTCCTTCATCAGCGTCAGCGTTTCAGCATCTATTTCGGCAGGCCTGGAATACAGCGATGACCGGCTGA # Right flank : TACATCGCCGTGCATGCCTTTGAAAACATAAAGATATGTACGGTGGTCGTTGGATAAAAGTTCGCCGAATCGGATCAAAACATCACCAGTTGTTGCGGATTCTCGCGAGCGCGCCTGCGACTCTGATCCGAGAAATGAACAATATCACGATACTGCCGATCAGTAAAATTCAGTATCTGCACATCGCCCGAATCTGGCAAATGACGCGAAATCCGGTTAACGCGGGTTTGAAACGCTTCCTTGCCATTTACGAATCGAGCGTAGACGGAAAACTGGCTCATCTCGAACCCCTCATCCAGCAGAAAATTCCGAAAATCGCCTGCCGCCTTGCGCTGCAGCTTGCTATCGGTTGGCAGATCAAACATCACAAGAATCCACATCAGTCGATACCCCGATAAAACTCTGATTTCATAGCTCATGCTCCCAGCACCGCAAGGGTCAGACGGTCCAGCGGGGCCGGTAAAGCCAGCGCCAACTTACCCGATTCGAAGCTTTGGCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCGCGGATTTTGAACAGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTGCGGCTGGACCGCGAATTTTGAACAGCTACAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.20,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //