Array 1 19132-18501 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPGZ01000050.1 Mesotoga sp. Brook.08.YT.4.2.5.2. Brooks.4.2.5.2_c34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 19131 30 100.0 38 .............................. CCTCCCGGTTGTCATACTTACCTTCCATAATTTTTAGG 19063 30 100.0 36 .............................. TAGCCGGAACTCATTCAGAAGAGGATCTTGTGATAA 18997 30 100.0 36 .............................. GCCTTACCGTCCGCTTCGCTATGTTCTCGTACTCCT 18931 30 96.7 36 ...............C.............. GTAGTGTGATTGTCCATTATAGCAATAAGCTGAAAG 18865 30 100.0 36 .............................. ATATACTCGCCGTCTATTGAGACGACGTGATATATG 18799 30 100.0 38 .............................. CTAGCAACATTGCCTTCAATGTCTTCTGCGTAACGTAG 18731 30 100.0 36 .............................. CGATTAACATCGAGAAGGTGTGATGAGATGGGTAAC 18665 30 100.0 38 .............................. ATATGTAGCTGATTTCCTTACTTCTTTTTCTGGTTTGA 18597 30 100.0 38 .............................. AGATGGTGCTGGAGATTCTGACTGCAGGAGGATTACTG 18529 29 93.3 0 .........................-..T. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 99.0 37 GTTGCGTGAGAACCATAGTGGTATGGAAAC # Left flank : CTTATTGCCGGATCACATTATATAACGTCGATTTTGTTGAACTCCATATTGCGGAGCATCCTTATCCGCTTTTATGAATCGAGTTGTGTTATTCTTTCAACAAGCTTTTCCCGAGTTAATGATTTTGTAAGTGATTCTCGTCGGATCGATCGTCTACCATTATCCTCTGAAATGATTTTCAAATAACACTTCTAGACCTATTTAGAATCATTCTTGTACAGTTTACATAGATTCGACTGGCAATTGGTCATGTGATTGAAAGCGAAATTGACAGCTGTTTTCTTCTGTGAGCTTTTGCCGAAGGGTATCTCGCCGGTATTTTCCATGATAGATCTTTCTTAGAAGATACCGGCATGTTCTTTCTTCGAAAAACTACGAGGCTTTCTCGAATAAACTCTGAACAAATCTCCAAAACGCAATGTTTACGGCTATTGCAAGAGCTGACCATTTAGTTGATTCCACCTCCTAAAAACCTGTATAATATCTTTGTAATAGAAGCG # Right flank : GCTGCCTTTGGCAGGACGCTGTGCCGGGAAGATCATCCCGGGAAGTGATGCGCCGAGAACCATCGGCGGACGCAATGCCCGGAGAAACATCCGGGGACGCATGGCTGGCTTCGCCAGGAGGGAGAAGCTTTCTAGGGGCAGGACGTTAGGTTGTATGAACCAACTCAACTGGTCATCCTGACGTGCTCTTGGTCAGGATCTGGTCTTTGATCTTATCGGAGGACGGGTCCATGCTCTTGGACGGTCAACGGAGGACGGCTCTTATATGAACCATAGTGGTATGGAAACTACTTTCTTACTAAACAGAAATCCAACTCAAGCATTTTAATAACCAACTTCAATTTAACTTAAGAGTATTATGTTAAATTCATCTGTTCTCTTCTAGCCCACTCCCAGTAAAGGCTTCATTCGAAACTCTACCTCTTCTGTTTGCTCTCTTTGATTTTGTATTTTACACAGTATGTGATATTATCTATTTATGTTAAATTAATGAATTTAGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGTGAGAACCATAGTGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 2484-2645 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPGZ01000036.1 Mesotoga sp. Brook.08.YT.4.2.5.2. Brooks.4.2.5.2_c42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 2484 29 100.0 38 ............................. TGGGATGATTTTCTTGTCGGTGGAATAGTATTTGCCTC 2551 29 96.6 37 ....A........................ CCGAATCAAAAGACTTGCCTCTAAGCAGTGCTCTGGC 2617 29 96.6 0 .............A............... | ========== ====== ====== ====== ============================= ====================================== ================== 3 29 97.7 38 GTTTGAAGAGAAGCAGATTTGCTTTAGTG # Left flank : TTACTACACCTCCATTTGCTAAGTTACTATAATCATACAGGAGAGAGTAAGAAAAAGGAGCATCTATCTTATCTAAAGGCGGGCGAAAATGCAGAATCTGCTAATCGATAGACCATCTGAAGAAGAGAAATTCGAGATCATGAAGGAAATGTATTACTCAATTGCCGAGTCTAGTAGCGGGAGGCATTCACTTCCGGATCTAAGACCGATGGATGAAGTATACTCCGACTTTCTCAAGAGAGGAGACTCTTTGATAGTTCTCAGGAGCGGCGAAGAAATCGAGGACATGTACATTCTGGTCCCCAGATCGATGAAAGACTCGCGTTCGGAAGATCCGGTCACATCTATGACCTGTTTGTGAGCGACATATATAGGAGAAGAGGAGCAGGGAAGCTTCTGCTTAGTGCTTCTTTAGAAGAACTCAAGAGATCCTCTTACTTGACGGTCACAGCAAATACATACAGGCTTGGAGCAGGATGGCGCCTTCTCAAGAGCGACGG # Right flank : GTCGGCAGAACACACCATGTTGCCGATAGAAGGCTAGAGGTAATGCGCGGTATACGTGAAGATTTGAGAAGTGTTTTTTTCGAGATTTCTTCTTCTCCTGAAGTGTTGAGAAGCCAGATGTCCATGACTCCAAGCGAGCTGTTCTTCACGTTGAATGAGACTCTGGATTCAGGGGGCAGAATTCTCATCTGCAGGCGAGATGAGAAAGCTGTCGGGATACTTATCTACTCTGTCTTCGAGGATTTGATGACATATAATCTACTTGGATATATAGAACTCGTATTTGTCATGCCACATTTTCGAGGAAAGGGTGTTGCGAAGAAACTGCTTTCATTTGCCACGAATGATCTGTCGGGAGAAGGTGTTGATGAAACGTTTTTTGAATGTGTCTTTGACAGCGATTATCACAATTGGTCTAAGGCTGTCGGGATGAGTGAATTCTCAATTCTTCTGGAGAAGAGTCTACAGCAATGAGAAGAGATCCCGAACTTTGATCGTTT # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGAGAAGCAGATTTGCTTTAGTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.60,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 22780-31826 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPGZ01000043.1 Mesotoga sp. Brook.08.YT.4.2.5.2. Brooks.4.2.5.2_c31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 22780 30 100.0 36 .............................. AAGAGTTCATCGACAAACTTGTCAATGGTTATGTTG 22846 30 100.0 36 .............................. AATGATTCCAGTACACATATACTATATCAAAACCTC 22912 30 100.0 38 .............................. ATAGTATGGTTGTTGCTAGTGGAGTTGGCACGACTCAG 22980 30 100.0 35 .............................. TCGGTTCTAACATTCAGATTGGAAAGGGAGTCGGG 23045 30 100.0 37 .............................. CTAGTGGGGTCGGCACGACTCAGGCAGTCGTGGGGTA 23112 30 100.0 37 .............................. TTCTCTTTGATTTCGGCTATTTTTCGTTCTATGAGGC 23179 30 100.0 37 .............................. TCAAAGTCTTTTTGAACATCATCCATTTTAGTGAGCA 23246 30 100.0 37 .............................. AAAGGCGCGAAGCGGAGAGGGCGAAACAGGCAAGCCA 23313 30 100.0 35 .............................. GTTGTGCCTACAATTGCCATCTTTGCATTCTCAAA 23378 30 100.0 36 .............................. ATATTCCCACGTGGTACGGAACGAAAACGGTGGCAA 23444 30 100.0 37 .............................. AAAAGCACGGAGTACGTTGATGAATCGGTTGATTATC 23511 30 100.0 34 .............................. GTGGTACGGGTGGCTTTGGGGACGAGATGGTGCC 23575 30 100.0 38 .............................. CTTCGTCGTCCGTGAGAACCTCGATATTCACGCTACCC 23643 30 100.0 36 .............................. TCCGTAGTCCAGCGCTTCCTCTTCGCTCTTCGCAAT 23709 30 100.0 36 .............................. TTCTTCCACATTCAATTTCTGAGCGGGTTTCTCCTG 23775 30 100.0 36 .............................. ATCTCTCATCATCTGCGTGACTTTCCAGCCGACACC 23841 30 100.0 34 .............................. CATAAGCGCAAAGGCTGCCGATTCAGATAAACTG 23905 30 100.0 37 .............................. ACATATTGGATATCAAAGATACCACCACCGGTCTTCA 23972 30 100.0 39 .............................. CAGTCGCATCGTCAACATCGATGCGATATGCACCACCTC 24041 30 100.0 37 .............................. TGGCAGCAGCTCTCGTGGGCTTGCTCAAGGAGTTCTG 24108 30 100.0 34 .............................. GGTATATCCGAGTTTTACGAACCAGGGATTAGTT 24172 30 100.0 37 .............................. TTATGTTCTTGGTACCAAAGTTTCCGGGGAACAATAC 24239 30 100.0 36 .............................. TTTCTCGCCTCCTTTTCGCCAATTTCCTCTTCCTTC 24305 30 100.0 34 .............................. CTATCCTCGCCAACCGCTTCAGCGGCGACAATAG 24369 30 100.0 36 .............................. AGCAGATTATGGCGGGTATCGAAAAAGCTATTGAAC 24435 30 100.0 36 .............................. TATCATCCGAGAAAGAAAGTTCCTTCTCAGACGATT 24501 30 100.0 38 .............................. AAGACATTCCCTCTTAAGTACAGCCCAATGTATTTCTC 24569 30 100.0 35 .............................. TCAGTTTTGGAACGGCGGCCACGAGCATCGGATCG 24634 30 100.0 34 .............................. ACGGGCATTCTTATGTTATCGATGGAATCTCGTT 24698 30 100.0 35 .............................. GAGGTATGACATGAAGAACACAAGAGGATATGATG 24763 30 100.0 36 .............................. CCGGCTCCTCTTGGGACTGGGGGGAAGCAAGAACTC 24829 30 100.0 37 .............................. TAGAGACGATCGCCGAGGTAGAGATTGAGAGAGTCAG 24896 30 100.0 35 .............................. ATAAGCGAGAGCAAAGCCGAGCGAACTGCTACTGT 24961 30 100.0 36 .............................. TCGTCTGACCCAGAGTAAGAGATCTTCCCGGTCAGA 25027 30 100.0 35 .............................. ACCTCGGCAACCATTGCAAACTTCTCTGATTTAGG 25092 30 100.0 35 .............................. TCGCACCTTTTGCTGCCACGTCTTTGAAGAACGTA 25157 30 100.0 34 .............................. CCGGATACCAATAGACATCTGATGTTTTTTTCAG 25221 30 100.0 35 .............................. AATATTTTAAGCGCAAATGGGATTATAACAGGACA 25286 30 100.0 38 .............................. TGAGCCATAAGCAAAATGAAGGCCCATTCGGCATTAGT 25354 30 100.0 38 .............................. TCACATCGCCAACGATCTTTGCCCTAATCTCATCGTTT 25422 30 100.0 36 .............................. AAAGATATCTGACAGCGGAGGAATACGAGAATAATG 25488 30 100.0 36 .............................. ATGACTACAACTACAATCCCGCTAGCGGAGGATTGC 25554 30 100.0 37 .............................. TCAGAGCGTCACCACTGGCTGTAATCTTCACTGAGTC 25621 30 100.0 36 .............................. CAGAAATTTCACACGAGTCGGCGCCGGGAGAGCTGG 25687 30 100.0 36 .............................. GCAGGTATCGAAAAGGCTATTGAACTTGAAAACAGT 25753 30 100.0 33 .............................. AAATTGTAACATACCATTATAGCTATATATTAT 25816 30 100.0 36 .............................. GCAGTGGCACGAAAACTTAAGAGCTTTGATCAAATT 25882 30 100.0 36 .............................. TGGGCGCCTTTTCAAAGCTTTGACTACTTTTCTAAC 25948 30 100.0 35 .............................. TCTATCATGGTTCAAAATTCATGGAAAAGGGGGTG 26013 30 100.0 36 .............................. TGAACCTGGCAATAAGTAAGTGAACAAAATTCACGG 26079 30 100.0 37 .............................. TGAGAAGTAATCACGCCTCCTGGTCTGCTGTGTGGGT 26146 30 100.0 36 .............................. CTTACTTGACTACTTACCTTGATTCACGTGCATTTC 26212 30 100.0 34 .............................. GCGCAGTTGCTAGAAATTAGAAATGCACGTGAAT 26276 30 100.0 34 .............................. TTCGCTAGCGTGATATACCCATGCAATCTCTCCT 26340 30 100.0 35 .............................. CAAAGTAGTTGGAAAAATGGAATATAGTATGATAG 26405 30 100.0 36 .............................. ACTTTCAATGGCGGGGCAAAATTCGGGCGAATTTTG 26471 30 100.0 36 .............................. CGAAAGGAGTGTGAGAGAGATGGTAGAAAGCAAAAG 26537 30 100.0 36 .............................. CCTCGATCTTCGTCTCTTTCTGATAGCTCTTCTTCG 26603 30 100.0 36 .............................. CCGGCTTAGATGACGTTGAAAAGCTCAAGTCAATCG 26669 30 100.0 36 .............................. TCCTGAGAAATGGTGAAGGCCTCTACGGTGAATCGA 26735 30 100.0 36 .............................. TCAAGCTGTGGTTCGAATCTACAACTCCTATACACT 26801 30 100.0 36 .............................. GCGAATAAGACGCCAGAAAAGCTTGAGAAAATCCTG 26867 30 100.0 35 .............................. ATTCATTTGACGGGTAATTATAATTTGTTCGTTTA 26932 30 100.0 37 .............................. CTCAGCAATACCAGAACGCGGCATACACTTTGGTTTG 26999 30 100.0 35 .............................. CTTTCTCATAATCAGTATAGTCATCTATCTCAACT 27064 30 100.0 37 .............................. ATGCGAATATCAATATTGGCAGTCACCACCTTTGTGC 27131 30 100.0 36 .............................. TGAATGGGCACCGGGTGAGGCGCCGTGGGATACTTC 27197 30 100.0 36 .............................. GTACTTGCAGAGAGGTAACAGTGCACGAAAATAAGT 27263 30 100.0 36 .............................. TACCCAGGCTCATTTGACCTTTTCAACCCCGGAGTA 27329 30 100.0 36 .............................. TTGCCTCGGTGCTTCCGGGAAGCCAGGGAACATCTT 27395 30 100.0 36 .............................. TGGAGCAAATCTAACCGACTTCGCTATGCAATTTAA 27461 30 100.0 35 .............................. GCAATTCTGCAGAGACTAGCTTTCGCAACGTTTCA 27526 30 100.0 36 .............................. TCGAGTTCTTTGAAAGCATCCCGCCAGTCGTGAAAT 27592 30 100.0 36 .............................. GTAGTGCACGAAACCATTTACCATACTCTGAAGTTC 27658 30 100.0 35 .............................. CTTGCTTACACATATGAGGATAATGACTGGGTATA 27723 30 100.0 35 .............................. ATGAGCAGTGGAAGAAAGTCAACGAAGGATCGAGC 27788 30 100.0 36 .............................. TCTCCGTCAGTATATGGCGTAGCGTTTCCTACATAA 27854 30 100.0 35 .............................. CTTGCGGAAGGCTGGCTACCGCTCGTAGATGAACC 27919 30 100.0 33 .............................. GAAACCGTACTATCATGAGCGCAAAAAAATAGG 27982 30 100.0 35 .............................. TTGAGTTCTTTGAAAGCATCCCGCCAGTCGTGCGC 28047 30 100.0 36 .............................. TCTTGATCGGGATCTCAATGGGCCCGGTAGATCCGA 28113 30 100.0 37 .............................. GTAGGAAGCCAGCTCCCAACAAGCACATCGGCAAAGG 28180 30 100.0 36 .............................. CCGATCCTTCTTTGATATCGAAGGGCCAGACGGTGA 28246 30 100.0 35 .............................. AAATCCCATTCAGGAAAACGGGTCGAGAGTTTGTC 28311 30 100.0 36 .............................. CTCAAGTACAGATGGACCACCTGACCAATTGGATAG 28377 30 100.0 33 .............................. GAAACCGTACTATCATGAGCGCAAAAAAATAGG 28440 30 100.0 35 .............................. TTGAGTTCTTTGAAAGCATCCCGCCAGTCGTGCGC 28505 30 100.0 35 .............................. CCGGTTTCCTGAACACGATTCCTTTGGAAAAGGGC 28570 30 100.0 36 .............................. TCTCTCCAATTGTTACATCTGCCAGCCCCTTGACGA 28636 30 100.0 36 .............................. TATAGAGGGTAACTGGATTCACGTACGAGACATATA 28702 30 100.0 36 .............................. GCGAATAAGACGCCAGAAAAGCTTGAGAAAATCCTG 28768 30 100.0 36 .............................. CCGGTTTCCTGAACACCATTCCTTTGGGAAAGGGCC 28834 30 100.0 36 .............................. TTCAGCGTTGGCAAGTCAATGTTTGAGAGCTTCAGC 28900 30 100.0 36 .............................. TTGTTCATCATGTTCAAAGGAGGCCTCAAGAGCAGT 28966 30 100.0 37 .............................. TTGTATGTGATATGCTGGCTTGAGCCGGCCATAAAGG 29033 30 100.0 37 .............................. TTCCTGTATTGAAACCTTGGATAGACCAGATAGGATA 29100 30 100.0 36 .............................. CTAGAGCAAATAAAGAGCAACAGAAGCTCGAACATC 29166 30 100.0 35 .............................. CAGCACAAATGAACCGGCCTCCGCAGTTGCCGCCT 29231 30 100.0 37 .............................. TCGCATCATAAACCGCCTTTTCGCCTAATGCCTTAAC 29298 30 100.0 36 .............................. TGTCAAAAAAATATGTTGGTGACGTAGAGGCAGCTG 29364 30 100.0 35 .............................. CGTGGTACTTTCCAACTGGCAGTAATATAGTACTC 29429 30 100.0 35 .............................. TTTGCTAACGTGATATACCCATGTAGTCTCTCTTC 29494 30 100.0 35 .............................. TTTTGTGAGTTAGGAAAAATGGAATCTAACATGAT 29559 30 100.0 36 .............................. TAGTGTCTATAATCGGCTATTCAAGTTAACATTGGA 29625 30 100.0 35 .............................. CGATGCAGAGATGCTTCTCTAAAGGAGCCGTTTCC 29690 30 100.0 36 .............................. CTATATTTAATCGAGGGAGTCGGAGGAATGAAGAGA 29756 30 100.0 35 .............................. CTTGTTCTCTATCAGTAAATAGACCTTTCTCTATT 29821 30 100.0 35 .............................. GATTATTGCCCTATCAGTCGGATCCGCTTTCTCCA 29886 30 100.0 36 .............................. CTTGCTACTTAGACTCACGCGCATTTCTAATGGTCA 29952 30 100.0 37 .............................. TCTATGAACCATGTGACCACTATGGAGGCATATCCTA 30019 30 100.0 37 .............................. CAGCTGCAACCGTGGAGCATCTCGGACAGAACGGATC 30086 30 100.0 39 .............................. TGGGAGAGGACTTTGCGTGGCTAACGGGGCTCTTGACAG 30155 30 100.0 33 .............................. TTTCCCATCTCAAAGAAAAGATAGGTGGCTTTC 30218 30 96.7 38 .......................C...... TAGAAAAATTGGCAAAGTTTTATATTCCGCAGGAGCAT 30286 30 100.0 35 .............................. TTTCAAAGAACGAAGCGTGGGATGTATTTCTTTCA 30351 30 100.0 34 .............................. AGTGCTACTACTTCAGGGCTTCACGGCGGTTCTT 30415 30 100.0 36 .............................. ATCGGGTAATTTATAGCTGGGTGTGAGTTATAAATC 30481 30 100.0 35 .............................. TTTGAAATGTATCGACAAATGATACTAACTGAAGG 30546 30 100.0 35 .............................. TTTTGCGGACACAAGCGGGACATTCAAAGCATATC 30611 30 100.0 36 .............................. CCAGAGCAAATAAAGAGCAACAGAAGCTCGAACATC 30677 30 100.0 34 .............................. TCTGCCACGTGGACAAGCTCTTGCCCTCTGTAGA 30741 30 100.0 36 .............................. CCGGATTTCTGAATACGATTCCTTTGGAAAAGGGTC 30807 30 100.0 38 .............................. GTTAGGTACACTACTATACTATACTACTAAGTACACGT 30875 30 100.0 35 .............................. GTGAGTCAGAGTTGGCTACAAGTCTAGAAATTAGG 30940 30 100.0 36 .............................. CTTGCTACTTAGACTCACGCGCATTTCTAATGGTCA 31006 30 100.0 36 .............................. TGTTATCGATGGAATCTCGTTCTCTTCTCATCCATA 31072 30 100.0 36 .............................. TAGTATCCTAAAGTGAAGGCGGTGTGTAAGTATGAG 31138 30 100.0 35 .............................. TTAATGAGTCGGAGCTAGCTACAGACCTTGAAATT 31203 30 100.0 36 .............................. CGCTACCGATCCCGACTATGCGAAGAAGCTGACAAG 31269 30 100.0 38 .............................. TTGCCTTTTTCTCTGTTAATGTAACCATGTTCTATCCC 31337 30 100.0 37 .............................. CCCCGATTTTGAAATTTCCCCCAACATTCAGGGAAAT 31404 30 100.0 35 .............................. TTCGAAATGTATCGAAAAATGATATTAATCGAGGG 31469 30 100.0 36 .............................. CAAAAGAGATCTCTTTTTTTTGCGCTCTTATCCTGG 31535 30 100.0 35 .............................. TAACTGATGAGCTGCCAGAAGATATAATAGTGTGG 31600 30 100.0 35 .............................. ACTAAAATTAGGCATTTTTAGCCTAAATCTATATA 31665 30 100.0 35 .............................. ATGAAATATCTATCCATTCCCCAACATTAGTAGCA 31730 30 100.0 37 .............................. CCCCGATTTTGAAATTTCCCCCAACATTCAGGGAAAT 31797 30 93.3 0 .......................C....T. | ========== ====== ====== ====== ============================== ======================================= ================== 138 30 99.9 36 GCTCCCAGACTACCTATGAGGAATTGAAAC # Left flank : GCTCTTTTGAGCTTGGAGTTCTTCCAAGGTGCGATAGAGATCAAATTGAAGAGCAGCTTAAGGCTGTCCTTTCAATTATGAGCAACTTTGGTTCTCGAGGGGCTAAGCCCCAATTTGGTAATGGCCTCTTTGAACTCACTGATGATACAGGAGAACCAATAGAATCACTTCGGATGATCAACAGATTCCTTAAGGAAAATTGCTTTATCAAAAAAAGCGATCACAAGAAAGGCTTTTCGCTGAAGAACTACTGGAAAATCGAGACAGAAGTTGGAAAATCTCTTCCACCAGCGAACCTGAAGTATGTGGGCAGAGAAGTTAAGAACTTGTATATCCCGTCGACCCCTGATTCATGGAAAACACCGGGGGATCGACAGAAATACTAGAATTTTGTTCTTCCATTGTAAATGGGATTTATAAGACATTGGTCTTTGAAAAACAGGCATGAACATAATTTGCCTCAAAACACTGAAAATACTATATAATCTATATAATAATGG # Right flank : CTTGAGAGAGAGTTCAATGAACTGGTCAAGGACTGCAGCTTGGGACATTTTACAAACTAGAGACATATTGGTTCAGTAGTCTACGGAAAAGGATCAAAGAGATATCACTAAAAGAGCAGGAAGGATCTCTCTTCCTTCCTGCCGTTAGGGTGTGTGAGTGGAGCAGTTGCAAGGGAAAACCAGTTGCAAGTGCCAAGTTGTGAGTTGCAAGAATAAGAGCTGCTGTACGCTGGAATAGCGGTCCTCGGTCAGCCGTCATCGGTCCTCCGATTTTTCAAGAGATTTGGAGAGTTTCCAGAGCATTCTATTAATGCTTTCGGCCTTCCTCTCGATTAGTTCAAGCTGATTTCGATTCATATAGCCAAACTCAAAGGAAATCTCAAGCTGGGCAACCGTCTCGTTCAGAAAATCCGCTTTACGATGCCTGCTGATCGCTGGAAAGACCGCTTTACTCTAAGAACCCGCCGAACGATAAAGGACAAGCTACCTGGGTAATGACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCCCAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //