Array 1 666442-668160 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386627.1 Bacteroides graminisolvens DSM 19988 = JCM 15093 strain DSM 19988 C511DRAFT_scaffold00002.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 666442 29 100.0 34 ............................. AAAGCTAAGCAAGCAAATGCTGGACTTGAAAAAT 666505 29 100.0 35 ............................. TCAATCATTTCATACGTACCATATTCTATTCTTTC 666569 29 100.0 36 ............................. TACGCAATTGACGCGTTAAGCTATACCGAAGCTGAA 666634 29 100.0 37 ............................. TTAAAGCGGCTAGAAGTGCCGTTTTGAAACGATTGCA 666700 29 100.0 37 ............................. AAAAAAACGGTTTGATTGATAGTATCGGTTCGCGCGA 666766 29 100.0 37 ............................. TAATTAAAGTTTAGGTTAAATAAAACAATTACTCTTC 666832 29 100.0 34 ............................. TGGCATAACCTGATAAGAGTCTACATTGACATAG 666895 29 100.0 36 ............................. GCAGGAGCTTTTTAAACGCACTGAGGGCTATGCCGA 666960 29 100.0 37 ............................. GCCCACAACGCTGCTCTGGAGAAAATGCCCCGCTATA 667026 29 100.0 37 ............................. TGTAAATGCGCGTACCTGAAACTAATTTTACTTTATC 667092 29 100.0 36 ............................. CTTCTTTTTGCGGCAGTCATAGTACGCTTCTAACAT 667157 29 100.0 36 ............................. TCAACTGGATAATGTGCGCTCGCCTACCTTGCCCTT 667222 29 100.0 35 ............................. TCCACAAATGGTTTCAGGAAGTTTTTCCTACAACC 667286 29 100.0 38 ............................. CAATAGCTTAGTGGGTGACTCCGTGGGAGCTACCACAA 667353 29 100.0 34 ............................. ATTCTTTTTGCGAAGCAATAAGTTCGTCCAATAA 667416 29 100.0 38 ............................. CAATGTCAGTCGATAAGTTTTTTCGCCAACCTCTTCCA 667483 29 100.0 36 ............................. GCGAATATGGCATCTTCACACTTATTGTACGACGAC 667548 29 100.0 36 ............................. ATTCTTTCTTGCCTAAACAGTTAGGAAATACAGCCT 667613 29 100.0 36 ............................. TATGGAAATGGTCTATCCACACTGTAAAATTCATAA 667678 29 100.0 36 ............................. CTGAATAACCCCGAATAGTAATCGAATTGCTTCTTG 667743 29 100.0 35 ............................. ATTGAAAAAAAACTCAAAGTTCTATGTATTTAGGA 667807 29 100.0 36 ............................. TGCTATTGAAAGCAAAGCGGTAAGATGTTTTTTTTA 667872 29 100.0 36 ............................. AAATGCATCTCTATATAGAGGATTTACCTCGTCTGA 667937 29 100.0 36 ............................. TATTATCCAGGTTCTCACAGGTTAATGCATCATCAA 668002 29 100.0 35 ............................. TGTGTGCAGACAAGGCCTTCATACCGGTAACGAGA 668066 29 100.0 37 ............................. ATACTTATAACGGCTGCAATAAGTCTGTTAGAGTATA 668132 29 89.7 0 .........................T.TA | ========== ====== ====== ====== ============================= ====================================== ================== 27 29 99.6 36 CTTTTAATTGTACCTTATGGAATTGAAAC # Left flank : CTTTTAAAATGTATTGGTAGCTTATGTATGTTGTTTTAGTTTACGACTTTGGGGAGAAGCGAGTTGCCAAAATGTTGAAACTTTGTAGGAAGTATCTGAATTGGATTCAAAACTCTGTTTTTGAGGGAGAGATATCTGAGGTTCGTTTGCATGAATTGCTTATATCTGCGAAAAAGATAATGAAAGAAGAGAGCGATAGTATTATTATTTTTAAAGGCAGAGATATCAGATGGACTGAGAAGCAGATAGTTGGTAGAGAGCGCAGTAATATTGATATTTTTTTATAGTAAGTTGTCGATGTTGATTTTATCTACTTGTGATTCTTGCTAAATTGAAGATTATAGCTCTTTGACTTATTGATTATCTACATTATATGGGTTATGTCGATCGCCAGAGATTTTTATATTACTGACAATCGACATTTTTTAGAACGTTTTTTTCTATCTTTGGACTTCATAAATGCTTTATTATTACGGAATTTCCCGTTTAGCATTTTGAGG # Right flank : TAATAACTTAAAAGTATACCACCCTAATAATTAAAAAGTATACCACTGTCAGTCCGTAGAAGACCGAGCAGTGCGCCCTGATTATTTGAGGCGTAGCCGAGAATATTCAGGGCGCACTGCTCATATTTTTCAGAGCATACTATTTATTTGTTTAACTTGCATCAATTATATATTGATGCAAAAAATGATAACAATGACTGACAGAAATGAAATAATTTCGATGTACGATAAGACCGGCTCGATAAGGGCAACGGCACGTAATCTTGGGCTTAATCGC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 274-5089 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATZI01000028.1 Bacteroides graminisolvens DSM 19988 = JCM 15093 strain DSM 19988 C511DRAFT_scaffold00026.26_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 274 29 79.3 37 T....G...A.TAT............... AAGAGGGTATTGCGATGGCTATCAGCGCAGAAACAGG C,AC [277,290] 343 29 100.0 35 ............................. CAAAAAAAGACGCCATGATAGTAACATACGGGATC 407 29 100.0 35 ............................. AGGTGACTCAGACTCGAGACGGCAGCAATACTATC 471 29 100.0 35 ............................. TTCAATGTTCGCTTTCGCTGAAGCATTGTCGGCAA 535 29 100.0 36 ............................. ACCAAACATTCATCTTAATATAACCCTCAATCGAAT 600 29 100.0 34 ............................. ATACAGAGGGCTTAAGTTATCAGGCCTCTATTAA 663 29 100.0 34 ............................. CAAGACGGGAAAAAGCGTTTTGCGGGGTCAGTTG 726 29 100.0 36 ............................. GAATTCAGGTTTATACATAATTGGCAAATTGTCACT 791 29 100.0 35 ............................. AGGAATACATGGCGCAGTTTGCGGAAACGAGTAAG 855 29 100.0 35 ............................. TTAAAAGACATTCTTCGGTGTAGTACTTGACTTTT 919 29 100.0 35 ............................. AGGAATACATGGCGCAGTTTGCGGAAACGAGTAAG 983 29 100.0 35 ............................. TTAAAAGACATTCTTCGGTGTAGTACTTGACTTTT 1047 29 100.0 36 ............................. AACGATTAAAGCAAAATGTTGTGCGAACGACTGTAT 1112 29 100.0 36 ............................. ACTTAAATACTCGGTATCAAGTTTATAAGTAGTTTT 1177 29 100.0 34 ............................. CAGAGACTTTTAAAATTACAAGATGATGGGATAG 1240 29 100.0 36 ............................. GCACATTATAAGAGTTTGCTTGTAACCATTTAAGTT 1305 29 100.0 37 ............................. TGAATGGACTTAATGCTAATGATAGATGGCTCATTGC 1371 29 100.0 36 ............................. ACCTCAAATCTTGTGAGGAACTTTTGCGTTTTTTCG 1436 29 100.0 35 ............................. GCGAAAAAACGGCAAGACTGCATAATCATTGATTT 1500 29 100.0 36 ............................. GCCGTTCGTCAAGTGCCTCCTTCTGCCACGGTATGA 1565 29 100.0 36 ............................. AAGAACTCATATACTTGCTTAGCTAGTTCCGGCTGT 1630 29 100.0 36 ............................. AACAATCAGTCCGGCTCTCCTAGGTATTCAAGTATG 1695 29 100.0 36 ............................. TCAGGTAGGTAGGCACGCCAACAAACTCACTTACCA 1760 29 100.0 36 ............................. GTCGTTAAAAAAGAACCAAATCGGGTCATGTTTGAT 1825 29 100.0 38 ............................. ATGACAATGTTCTTGCTATATTGTAAGTAGCTTCTGTA 1892 29 100.0 36 ............................. TGGAAGTAGCAAGACAATCAGCGATAAAGGTTATTT 1957 29 100.0 34 ............................. GGGCAACCTGAATACCTGATATGCACAAGTTTGG 2020 29 100.0 36 ............................. AAATAAAGTTGCTACCGTGCAGGCTGATGATAAGAA 2085 29 100.0 36 ............................. AGTAGTACTATACAGTCTCCCGATCCTTTGGCTAAT 2150 29 100.0 37 ............................. TCCTTACCGGTAAAATCCTTCACGTTACGTTTGCCCC 2216 29 100.0 36 ............................. ACTTTTCGGGAACGGTGCACAGCAAACGGCTTTCTC 2281 29 100.0 36 ............................. CATTGAAGAAGCAAGAAGCAACCGCATGGATTAAAG 2346 29 100.0 34 ............................. AGGTGGTAGCATCGGCTACCAAGTTAGTAGCTGC 2409 29 100.0 37 ............................. ATTATAATAAGAAGCAGTATTGACATAGCCAAGGATG 2475 29 100.0 36 ............................. CTTGAAAAGACTAATAAGTCTGTTGGTGTGGATATG 2540 29 100.0 37 ............................. AATTATACCTTCTTTTACACATTCAATAAATACATAC 2606 29 100.0 37 ............................. ATATATCTATTGAAGTAACTATTGAAAACTTTGAGTT 2672 29 100.0 36 ............................. AAAACAGAGGGTTTGGCAGCCGTCAAGGTAACGGTT 2737 29 100.0 34 ............................. AGCGGTATGATAATGACATGGCCGATGATACTAC 2800 29 100.0 35 ............................. GCGTAAACTCTTTTTTTGTTGCCGCGCCTGTGCTT 2864 29 100.0 34 ............................. ATCAATGAATTGAGCTACCCATGAATCTGGATCG 2927 29 100.0 35 ............................. TACCTGTACCTCAGGGGATTGATTGTACAGGACAT 2991 29 100.0 34 ............................. GAAATACCAGACTGGAGTACATCCTGGTTATCTT 3054 29 100.0 36 ............................. GTATGGATCGATCCGTCCGTTAATTGCAAAAATGTA 3119 29 100.0 34 ............................. CGCTCTAATATTTCAAGCACAGTAGCGTTAACGC 3182 29 100.0 34 ............................. TAAATACAATGGTTTATCAAAATCAATTACAGGG 3245 29 100.0 35 ............................. AATAAATGTCATGGAATCATCGTTTCCTAACGAAT 3309 29 100.0 34 ............................. AAAACTCCACAATTGCATCGTGCTGCAAGGGTGT 3372 29 100.0 37 ............................. TGGAAGATGGCGTTTAGCTTGGTTAATATGTCGAGGA 3438 29 100.0 36 ............................. ACGGGATAAACTTCTTTCCGTGTCTGATCAAACAGC 3503 29 100.0 34 ............................. CAATTCAAGAATTATCCGTTGCTTGGTCGCAATT 3566 29 100.0 36 ............................. AGATAAAAAATCAATATACATTCCAAACAGGCCTTC 3631 29 100.0 37 ............................. ACAGCAAAATTCTGTTTAGTCATACCCAAGTTGAAAC 3697 29 100.0 37 ............................. GCAGAACACTCTCAGTACATTCTCCATTCAGGAAGTC 3763 29 100.0 35 ............................. AAAAGATCTTGTTTTTCTTCCTCAGACAGCTCTTC 3827 29 100.0 36 ............................. GAATGAAAGTTGGGTGGTGCATTATGATCCGCAAGA 3892 29 100.0 37 ............................. TGAGCCTGCGGAAATGTTCGCGCACAGCCTTGCTGCG 3958 29 100.0 36 ............................. AATATAGATGAATTGACAGATGGGAAACGTACCCTT 4023 29 100.0 37 ............................. ACCTCATAGCTTGGATGGTGGAGCAGCTGCCTTACAC 4089 29 100.0 35 ............................. GAGAAACGACGGTACTCTTCAAAGGCTTTTTCTTT 4153 29 100.0 38 ............................. GTTCGCCTTGTTTGTTCAGGCGTGGGTAGTATCTACAC 4220 29 100.0 37 ............................. TGTACCGAATGAGTATGCGGTAGCACATCTTTGGGTT 4286 29 100.0 36 ............................. CTTCAGGGTTACGACTCGGGCTTCACCTTGGGCATA 4351 29 100.0 35 ............................. ATTATCCTAGCTAGTACCTTTTTATCAGCCTCATC 4415 29 100.0 36 ............................. ATAGACGTTCTCTATTGTGCTCAACTAGAGCTTTTA 4480 29 100.0 37 ............................. AATCAACTGAATTACTATCCATCTTTTGGCACTCGAT 4546 29 100.0 34 ............................. GGCAGAAGATGTTGGAGCTCGAGCAACGTATGCG 4609 29 100.0 36 ............................. CAGAAAATACAGAGCGATACCGTATCAGGTATGAGT 4674 29 100.0 34 ............................. AGCAGTCACAGACACAACAGTAGCAGTCGAACAA 4737 29 100.0 36 ............................. TCGGATGTAATTGTTGACCCCACGCTTGTGGATGAC 4802 29 100.0 36 ............................. AGTATAAGTACATAGATCCGCTCATTACCGGCGTGT 4867 29 100.0 36 ............................. TGTCTAAGCAGTATGCTCAGGTGAAAAAACGCATAG 4932 29 100.0 35 ............................. ACTTGCATATAATGCAGCTTTGACGGCCGAAGGAT 4996 29 100.0 36 ............................. AGTTTTCGGTGATGCGTCCGCATATGTGTCGAAGTA 5061 29 93.1 0 ..........................TG. | ========== ====== ====== ====== ============================= ====================================== ================== 75 29 99.6 36 CTTTTAATTGTACCTTATGGAATTGAAAC # Left flank : ATTTGAAAGATGGAATGAGGTTATAAAGGATAAAATACTTGTTGCTGCACTTATAGACAGAATTACGCAAAAAGCTTATCTGGTAAATATGAACGGGGATTCTTACAGACTGAAGCAGACGAAATTATTAAACAAAAAATAAATGATTTATTATGTGTATAGAAGTTTATCTAAACAGAAAACGGGAAAAGGGAAAATATCCTTTGCCACGTTCCAACATTTTAATATTTTTGCAAGTGGCAGTGGTCCATTTTTTAATTATTATATGGTACCT # Right flank : CAGCTTCCCTTTTTTAGGACGGTGTTTAATTAGACTGCTAAATTAATAATATTATTATCAGTTTCATACTTCCTTCTGTATGAGGGTGTGTCAAAACAGGCACATCCTCTTTTTTTCTAATCGCTAGCTTGTCTCTAATCTAAGTTTACCTATGCCGCAATTTTCGGAAGCGGTGACTTCAAAGTCGCCCAATTCATCCCATAAATCGCTTTTAAGTGTGTGTACAGTCGGTAAATTAGGTCAAGAAATAGTTTAGAGGCTTCCTTGGCAATTTTTGCGCACATCTTTTTGATATTAAAGGCAATGACAAAGAAGGCAAAGTCCATTGTAACCTTTTCTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 125483-125323 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATZI01000008.1 Bacteroides graminisolvens DSM 19988 = JCM 15093 strain DSM 19988 C511DRAFT_scaffold00007.7_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================== ================== 125482 31 67.7 34 GGAAGCAC.CA.................... CGCAGAGGTAAAAGCATCTTTTCCAATTGATTTT 125417 31 100.0 33 ............................... ACATATCCTTTACTTGATGCTGGCATTCTGTCA 125353 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ================================== ================== 3 31 89.2 34 TTCTTTTAATTGTACCTTATGGAATTGAAAC # Left flank : GGAATCAATTACCTCATTATCATCCTTCTTTTCAGCATAATAGAAATACGAACGATGAATCGATATTAACCTGCATGCCCCAGTGATGCTGATTTTGTAATCCGTTACTATTTCTGCTACAACGTCTTTCTTTACCTCGGGCTCTATAGCTTTTTTTCGATGACATCCTTTAGGATCTTATTATCTAAAGCTATATCAGCATACATCTGCTTTAGGCGACGATTCTCTTCTTCAAGCTCTTTCAAGCGCTTAATATGGCTTGAATCCATGCCGCTGTACTTCGATCTCCAATTATAAAGAGTAGCACGAGATATACCATATTCACGACAGATAACATCTGTAGATAAACCACTATCAAGCTGATTGACTGCTTTTACGATTTCATGCTCACTGTGTCTTGACTTTTTCATCTTTTATTCCTCCTTGACAAATTTAATAAGATTTGTCTAATTACAAACAGTCCGACTTAAAGGGAAGCACACAAAAAAGGGAAGCTGACA # Right flank : AAAGCCAATAATATCAATAATCATTTTAAAAATGCATTTTCACATATCATCTTGCGTGGACGAAAAGAATTCCATATATTGCAGCAGTATTTCCCCTAAATTAGTAAGTATATGGATGATCTTAAAATCGAAATGCTTTGTACGGTTCTAGATAAGATACCTTACGGGTCCACATTCCATTTAGATGGTGTTATGATGGAGAGCCTTATACTACATTCCTTTCCTGATTTTAACTCTTTTTCCCAATTTGAATATTCTAATAAAAACAAATTATACGATACGGACCGCTTTTTCATATTAAATACTAATAGCATTTCATGGCTTAAGGAGTATATTCAATCCCACAATTTATTAGATGTTTTTATGTTTTATCGCATCTACGACAAAGATCATAAAGAGATCTTTTTACGTGTATATGATACAGATAGTTATGAAGTATCCAAAAGTTTAAATATTAAAAAAAAAGTCATTGAAGAATGGAACTCTAAACAAGGACAGGG # Questionable array : NO Score: 7.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.46, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTTTTAATTGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //