Array 1 433-63 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACEN01000066.1 Neisseria flavescens NRL30031/H210 N_flavescens-1.0_Cont150.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================== ================== 432 34 100.0 35 .................................. TATTTTTAAAACAATAGGGGGGTGGGTCTCTTGGG 363 34 100.0 33 .................................. TGCTTACAAAAATCTTGTTTCTGATTCTCTTGG 296 34 100.0 33 .................................. CAGACGCCTGTTTTAGGGTCATATCCGCGCCGT 229 34 100.0 33 .................................. AGCCTATGAAAAGGTGGAAGCATTGGGCAAGGA 162 34 100.0 32 .................................. AAAGTCTAAATCTACGGTTTGGGTGGGTATGT 96 34 97.1 0 C................................. | ========== ====== ====== ====== ================================== =================================== ================== 6 34 99.5 33 TCCAGCCGCCTTCAGGCGGCTGGTGTGTTGAAAC # Left flank : TGCACATGGGAATACAAAATGCTGATGCTGATTACTTACGATATTTCGCTGGAAGACGCGGAAGGACAGGCAAGGCTGCGACGCGTGGCGAAATTGTGTCTGGACTACGGCGTGCGCGTGCAATATTCGGTGTTCGAATGTGACATTGCGCCCGACCAGTGGGTTGTTTTAAAGGACAAACTTTTGAAAACCTACAACCCCGAAACCGACAGCCTGCGCTTTTACCATCTGGGCAGCAAATGGCGGCGCAAAGTGGAACACCACGGCGCAAAACTGGCAGTGGATGTGTTTAAAGATACGTTGATTGTGTGAATCGCCAACCTACAGTTCTCATGAAAATGCGGCAGGGTTGGCAAATTGGGATTGTTCTTTAACAATTAGGATATTGCGAATGCGGGTGTAACGGAAAAGGCTGTGTTATACTCACGCTCGCGCTTTTCTTGGGAGCTTAGCGAGATTAGGTTTTCGAAACCTGATGTAGTAAGGCTTTTAAGAGAGGC # Right flank : CTATTGCCTATTAAATCGCGTCATACCGCGTTGCCCAGCCGCCTTCAGGCGGCTGGTGTGTTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCAGCCGCCTTCAGGCGGCTGGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //