Array 1 9304-8555 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFM01000054.1 Salinivibrio sp. PR932 scaffold54.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9303 28 96.4 32 ................T........... ACGCCCCTTTTCCGTAAACCTTTTTGCCTAAT 9243 28 96.4 32 ................T........... AAATGTTTAAAGAGTCGATAGAGGGTGATTTA 9183 28 100.0 32 ............................ ATACTTATTAACCCCGCTACAAATTTTTTGGT 9123 28 96.4 32 .............T.............. TTCAGCTTGTTGTATTCTGAATCTTGCGGATT 9063 28 100.0 32 ............................ TGATCATGGACCTGCGCGACAAGGATTCGGTC 9003 28 100.0 32 ............................ AGATGTTCACGACGTGGATGCGCTGCGCCGTG 8943 28 100.0 32 ............................ TGGTGACGTGATTGAAGTGATGGACAACTTCT 8883 28 96.4 32 .............T.............. ATACTTATTAACCCCGCTACAAATTTTTTGGT 8823 28 96.4 32 .............T.............. AGGATTGTACAGCGTCACGCTGTACAAAGATG 8763 28 96.4 33 .............T.............. AGAAAGTGCGGATGAAAACACCCGCAAGCTAAA 8702 28 96.4 32 .............T.............. TCCGGCCGCTTCCTTGGTGATGTCGACGGCAT 8642 28 100.0 32 ............................ TTTCAAGCACAGGCTCAGCACTGGGTTGCTTT 8582 28 92.9 0 .............T...T.......... | ========== ====== ====== ====== ============================ ================================= ================== 13 28 97.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTTTATCTACGATTAGCCTTACCGTTAGACGATTTTACTTTATATTGGCTTTTACAATGACTGCGGCCCACAGACGCTGAACGAAGCGCTTTATGCTTGGTTTTACGCCCGTTTGTACGTTCTCGCCATACTTTAAAGCTGCGCGGCTTTAACTCACGGCGCATCAGTGCAATGACATCATCTTGTCGCAGACCATATAGTGTTTCAATCGCCTCAAAAGGAGTTCGATCTTCCCACGCCATTTCAATAATCCGGTCTAAGTCACCAGGCTCGGTCAGTTGCATACGCTCCTCCTCGTAGTAGAGCGATAGATACGGATAAGTCGAGCCACGTGGATCAATAAGGGGAGATGCCTAAATCCGTTATGACCCTTATTTTTTGGCCATTTAAAAATAAACAATAAATACAGCTAGTTACGAAAGGCCCTTTTTAACAAGGGTAAAAGTCCATTTTTAACCTAACGGCCTGTTGTCACTGACGATTATTAAGTTATTCTATT # Right flank : GGATTGAATGAGAACTCTTGTGTGCTGCTATATACCTAACGTCGTTCGGCTGAATCAATATGAGTGAAAAAGTTGGGAGTCACTTAAAAAAGCGCTATATTCATTATTCATATTTATGAATAAGTGCGATAGTTATGGCAACAACAAGTTTAAGTTTAGGGGAGCACTGGGAAGTGTTTATTAAAAACGAGGTAGCAAGTGGCCGTTACGGCTCTGCTAGCGAGGTTGTTCGTGATGCATTACGCACGCTTGAGGAACGCAAAACCAAACTGGATGTGTTGCGCGCACATCTTGATGAGGGGGCTCGACAGGCAGCAAGTGACACGTTTGTCGATGATTTTTCAATGGATGAACTGATTAACGACTTGGACGCAGAATCTTGACGGCGAGCCAAACAAAAAAGCAGGTTCGTATTACGCCCAGAGCACGTGATGATCTTAAAAATATTGGTCGTTACACTGAGCGTAAATGGGGAAAAGCACAGCGTAACACTTATTTAA # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1384-1236 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFM01000065.1 Salinivibrio sp. PR932 scaffold65.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1383 28 100.0 32 ............................ AACATGTCAGCGCAAGAATATAACAAGTTATT 1323 28 100.0 32 ............................ TTGGTTCTTTGACACTCGATTTTTGTAATCAA 1263 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CTGGACGATCTGTTACCCCGACCGTATGTTGCCGCGATTAGCACCGCTTTATGATGTGGTCTTTACGCAGCCTTATATTGAATATGACAACATTGCGTTGAAAATGGCGAAAAGTAAGCGTTGGTATGATATTGGTTTGAGCCATTTTGAACGCTGGTCGCAAGATGTGGGTGTGCCGTGGCAAATGATCAAACCGCATCTGTTGGATACGATCAACTTGGCGAGAGATATCTGGCCAAATCAACTTGCGCAATTACCGATGTTAACGGAGCACAAAGCGATGCTACGTAATCATTGGAAAGCCCTGCACAAGGACTTCACCATCGATTCGTGAGCCAATCTAACGGAGAGCTAATCGGCACCTTCTTACCCTTCTTTTTTAGCCACTTAAAAATAAACAATAAATACAGCTAGTTACGGAATCCCTTTTTTAACAAGGGTAAAAGGCCATTTTTATCCTAACAGCCTGTTGTCACTGACGATTATTACGTTATTCTATT # Right flank : TGATAAATTCAGGCCGCGGATCGTTCACTATCGCATTGGTAGCGGAACGAGCATTATGAATGGTTCGTTCATTAGTGAGGGTGTCTTGTTTTTCTACAAAATGACCAACTAACTATACTCTTTCGTGGCTTGGTATGTAACTCGACGTCTATCGTTAGATTTATTTCTATTGAGTAATCAAAAAGTAACTCGTCGCATGGTTATCATTGCCTAGATTTTCTAACCTAAGCCGCGATTCTCTTCTACGCTAACTCAGTAAAGATGTTTTTACGGATGTTGAGTGCTAGGAGTTGGGTATGAACATCAATAACACCATGAAGTTAGTGTTCTTTATTATTGGTGCAGGAATTGTTGTTAGTTTTGTCACGATCATCCAACTAAATGGGCTGATGAATAAAGTTGATGAAATGGCACAAGTTCGGTATGCCTCGTATCAAACTGCCGATGAATTAAGGCAAAGCTCTGATGATTTAACCCGTCTGGGGCGAACGTATGTTGTA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 107872-107107 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFM01000008.1 Salinivibrio sp. PR932 scaffold8.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ==================================== ================== 107871 38 100.0 34 ...................................... GTGGAGGGGATAACCCCTCCACGTTGTTGCTTAT 107799 38 100.0 35 ...................................... TGTAACGATGTGTGTTTTCCTTTTCAACACCCATG 107726 38 100.0 35 ...................................... CACGAAGGCCATAGCGTCGTATACAGGCAGGTCGA 107653 38 100.0 34 ...................................... GCTGCGCTCTCGGCGTCAGAGGCCAACTCTTCGA 107581 38 97.4 36 ....G................................. TTAATGGGCGTTTGGGTATCAATTAATGAATTTTTA 107507 38 100.0 35 ...................................... CTATTGTGGATGATAAAATAGAAGATGTGCTCAAA 107434 38 100.0 34 ...................................... CTGCATTTGCTTGGCTGTTTTGCAATTGTCTATC 107362 38 100.0 35 ...................................... GCTAACGGTCAATGGGCTTAGAACTTCCACATCGT 107289 38 100.0 35 ...................................... CAAAGTTCATCGTCTAGGGTATATTCCCTTTCCGT 107216 38 100.0 34 ...................................... AGTTGTTGCTGTAGCATGACTTCATTAGCTTGAT 107144 38 86.8 0 ..............................T..T.TCT | ========== ====== ====== ====== ====================================== ==================================== ================== 11 38 98.6 35 GTCCTCACGGACCACGCCCTGACTAAAGGGATTAAGAC # Left flank : ACAATTTTATCCAAAATGGTTTGCATGGCAGAAAAAGCGGCGTCAGAGATTGCGTCGGTTAGCGCGTCTTTGTCGCCATTATATCGAGAGGGCATAATCCATGGATAAACCCCTATGGCTAATCAGCTACGATGTGAGCCACCCTAAGCGGTTACGGCGTATTTATCAATATTGCAGTCAGTATGGTTGGCCGTTACAAAAGTCGGTGTTCGTGTTTGCGCTTAATAAAGCAGAAAAAGAAAAAGCGTGTCAGCATCTTATTGGCATAATTGATGATAATGAAGATAAGCTATTGTGTATTCCTTTTAATCCCACCGCGGGCAGCTTTCATCTTATGCCGTCCAGTGACCTGGTGATCGCCCATGATGATCCTCGCTTAGCGCGGTTTGTTCAATAATACGGTATGAAAATTGCTTGATTTTAAAAGTTATCCACTGTTTAAAACGACTGTTTATTTTGCAGCTTGCAAAGATAAAAACAATCAGTTATAAGTAGAAACT # Right flank : GTCGTGCCTAGCCCCCCGGGCACCAAGATCGTGAGCGATAAAAAAAGGCCACAGGGTTAACCCTGTGGTCTTTTGCGTGTGCGCATCGTCTAAGTTGCCTAACTGGTGGCGTTTTTGTATTGAATATTGTCAGGCGCAATCGTTAGGCCTTTATACACATAACCCGCTCTGTTGACTTTCCGCTTATGCACGTTATTAATCGTGTAGTACTGGCCTAATTTCTTACCCAGCTTGTCGGTGATTTGCTTGTTGGTCTCTTTTAACAAGCGATTCCATAAATTTTTGTGCCGTTTTCTCAGCTCATCAAGCGGTCGCTCTAAGTCGCTGTTGAACAGAATGTCTGTATCTTTTCTATCGCCTTGGAACAACCAACGCTTGCGGGCTACGCCCGAATCCGTGTCATATTTTACGATTTCCTCCGCGGTTTCTTCGGCGAGCTCTACCCACCTCACTAGATCCCAATCGTCGCGCTCGCTTGGCAATGCGGCACTATCAAAGGA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCACGGACCACGCCCTGACTAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 112508-111237 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFM01000008.1 Salinivibrio sp. PR932 scaffold8.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 112507 38 100.0 35 ...................................... GAACAACTCGAACGTAATATTGTGTCACACATAGA 112434 38 100.0 35 ...................................... GAGAGTGTGTCAAGTGCAGCTTCTGCATCGTTAGC 112361 38 100.0 35 ...................................... ATTGATGCTGACTGCTTATCGAATGATGCTTGCAG 112288 38 100.0 34 ...................................... TTTGATTGATTAAGGGGCCGGATGGCCCCTTTTG 112216 38 100.0 34 ...................................... TCGGTGACGCATTTGACGGCCCTGTTAAATTTCA 112144 38 100.0 34 ...................................... TTAACCACACATCATTCACCGAAAGAAATTGATC 112072 38 100.0 34 ...................................... TCGGTGACGCATTTGACGGCCCTGTTAAATTTCA 112000 38 100.0 34 ...................................... TTAACCACACATCATTCACCGAAAGAAATTGATC 111928 38 100.0 34 ...................................... CTTTGTTGTAACGAACAATAGGGAAGTGATTAAT 111856 38 100.0 33 ...................................... TCGTTACCCAACCACTTGTTGGTAGGATCTGGA 111785 38 100.0 36 ...................................... GTTTATTAGATAGAAGAAGTAAAGGTGCCGGTTGGT 111711 38 100.0 37 ...................................... CTCAATCATTTTTATGACCTTTGTCTTGTCGTGTTTT 111636 38 100.0 34 ...................................... TCTACGGTGTTGCAGGGAAAAACCCACTGGCTAT 111564 38 100.0 34 ...................................... AACAGGTGAGGAGATTGCTGCACAGAAAATCTGT 111492 38 100.0 34 ...................................... TTAATGTCAACCACATTGCCAGTCTTGACGTAAA 111420 38 100.0 35 ...................................... CTTTACTTTGCTCATAATTTTATCTCCAAATTAAA 111347 38 100.0 35 ...................................... TTAGCATGTTGGTCATGCTGCGGTTGCGGTTTGCC 111274 38 97.4 0 .....C................................ | ========== ====== ====== ====== ====================================== ===================================== ================== 18 38 99.9 35 GTCCTAACGGACCACGCCCTGACTAAAGGGATTAAGAC # Left flank : GATTTATGTGGGAAATGATCAGATTGTCCACCTAAATGGTGACGGTTTTATTGAAGCCGTATCGCCGGCACAGTTTTTACAGCGCTTGGGTGGCTTTAACCCAGCGATAAGTATTTATGTGTCATGCCAAGATGAGCAAGCGGTCGGCTCGCCAGCGGCAGCCACGCGAGCGATGCAGGCGGTAGGCAAACGTCAAGACTACAATATGCTGTTTGACAACTGCCATCAATTTTCGTCGTGGTGTTTGTCGGATAACCGTGCAAACAGCGACAGTTTTACCTGGATGCTAAAAGACACCGCCAAGGCACATTTACGCGCAAATACCTGGCGAGTGTGGGATCGAGAAGATTAAAATAAGATGACAAGACGTTCAATCGCTTACCAGCGAGAATAACAACATGGCACGTCATTTGCTTATTTTTGTAAAATTTAGCGTGTTTAAAACGCTTGTTTATTTCGCAACTTGCAAAGGTCAAAACAATCAGTTATAAATGAAAACT # Right flank : ATAATCCGTCAAAGTCTTTTCTCATTTCTACCATCGTCCTAACGGACCACGCCCTGARTAAAGGGATTAAGACTAATACGGAACCAGTAATTACAAAGGGGAGTTTTGCGTCCTAACGGACCACGCCCTGACTAAAGGGATTAAGACTCAAGTTCCTCTTGATAAGCGTCCTGAACGTCTAGTCCTAACGGACCACGCCCTGACTAAAGGGATTAATATGTAGGGCCTAGGAGCCTAGGCCCTAGGCCCTTTATTTCACGCCTCGCTTAAAGGGCTCCCTCTTGTGTTTGATTTTCCTACTATCACCGATTGGTGAACCGTGCGCTGGCATCGGATAACAGGTATCCTTACCCTTATCAGTTGCCCGCGATACTGGGCAGCGTTTAATCACCCATTGCCACGGCCCCATACAAGGAGGTGCTATGCAACACGTTCATATCAATCTTGTCTCCAACCAATTGCTGCCTAATCTTATTCCCACATTGGGCGACAACGCCTGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTAACGGACCACGCCCTGACTAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //