Array 1 334189-335937 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNIV01000001.1 Streptococcus agalactiae strain 214 NODE_1_length_556671_cov_135.115991, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 334189 36 100.0 30 .................................... GATATGGTGGACAGGTTCAGCAGGTCATGT 334255 36 100.0 30 .................................... TAATTGCCAATGCTTACAATATCTTCGTCA 334321 36 100.0 30 .................................... GAACTATTGCCGTTTTGATTAGTTTGTTGT 334387 36 100.0 30 .................................... ACATGCCACCTTATTGTATGGTGTATCGTT 334453 36 100.0 30 .................................... ATTTACAGGATTACCAAGAAGCACAACTTT 334519 36 100.0 30 .................................... TTATTTTAATATGTACTTAACAGATTATTC 334585 36 100.0 30 .................................... AACTTTATACAATTGTCTTGGAAACCTTTG 334651 36 100.0 30 .................................... AGACATTTACCTATTACTTTAGAAAGTCAT 334717 36 100.0 30 .................................... TAGTGATTTCCGTATTATCGGAAAAGTTGT 334783 36 100.0 30 .................................... TGATACCTTTATTTTCATACACAATCCACT 334849 36 100.0 30 .................................... GAAGTATACTACGGTTAGAGATTGGCTCAA 334915 36 100.0 30 .................................... GAAACTTCGATTAGTTTGCGTACTCGCTCA 334981 36 100.0 30 .................................... ATTAGTCCTGTTGTTATGATGGATGATTAT 335047 36 100.0 30 .................................... ACAAACCTCTAATGGATAATATAGAACAAA 335113 36 100.0 30 .................................... ACACAATTAAACATAAAGAAGTGCTTATTT 335179 36 100.0 30 .................................... TCAGGAGATTGTGTGTACTCACGAATTTTT 335245 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 335311 36 100.0 30 .................................... AACCTTGATAGGCGTACTGTATGGATTCCA 335377 36 100.0 30 .................................... CTACTGTATTATCTGAAATAGTATCGTTTT 335443 36 100.0 30 .................................... TCTCGGGAAATGCAACTGATGCTGCAATCA 335509 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 335575 36 100.0 27 .................................... CGGGAAATGCAACTGATGCTGCAATCA 335638 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 335704 36 100.0 30 .................................... GCTAGCATGGCACAAAAATAGCGTTGGAAT 335770 36 100.0 30 .................................... TTAATAACTGTCCGTTTTGCCATTTCTTGC 335836 36 100.0 30 .................................... AGAGGGGAAAATATCAATGCCGAATGCTGA 335902 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTAGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CGATGGTACAAAATCATTTGTTGGTACTGATGTTTTAAAGCTGTGCTGTTATTATGCTAGGGCACCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCGATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCAAGATTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTCTTTGTCACTAATACTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //