Array 1 949103-950854 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016646.1 Neisseria meningitidis strain M22819 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 949103 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 949169 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 949235 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 949301 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 949367 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 949433 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 949499 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 949565 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 949631 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 949697 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 949763 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 949829 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 949895 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 949961 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 950027 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 950093 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 950159 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 950225 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 950291 36 100.0 30 .................................... TGTAAATGAGGTTATTGAAGATGCAAAAAG 950357 36 100.0 30 .................................... TTTTCCAAAGCGTAAAATCACATTCGGGGC 950423 36 100.0 30 .................................... AACACTGATAGGGAATGTACCCTCGATAGT 950489 36 100.0 30 .................................... GAACCTGTACGACTATCGCAAGGTTGCAAC 950555 36 100.0 30 .................................... TTGGTGGATTGCCATACTCAGAAACAATCA 950621 36 100.0 30 .................................... CACGCAAAGACGGCATCGAGAACACATTCA 950687 36 100.0 30 .................................... TTCGGTCGATAGCATCCATTATCTGGATTG 950753 36 100.0 30 .................................... AGCGAGTGTTCAAATATGATTATGTGAATA 950819 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //