Array 1 4087489-4088248 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058977.1 Streptomyces sp. NEAU-sy36 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4087489 29 100.0 32 ............................. GCCTCGGCCGCCGGGTCCGGGGTGTTGCATCA 4087550 29 100.0 32 ............................. TCGGCCCGCTCCCCGAGCTCCCCGACATGGGC 4087611 29 100.0 32 ............................. GCCGACGCGATCAGGTTGAGGTGGGGCAGCTC 4087672 29 100.0 33 ............................. AGCAGCGGTGTACGGCTCGGTGTCACGTCGGTC 4087734 29 100.0 32 ............................. ACCTCAGACGGCGGGTTCTCCGGCCTGTGCTC 4087795 29 100.0 32 ............................. AGCGGCGACGGGTCGACCATGAACCCGGCGAC 4087856 27 93.1 32 ........--................... GCCGTAGAGGCTGGGCATACATGCCTGAGAAT 4087915 29 100.0 32 ............................. GTGGGCTTGCTCCATAAGAGCAGCCCAGCCGC 4087976 29 100.0 32 ............................. TACGACCTCAAGGCGGACACCATCGGCCTCGA 4088037 29 93.1 32 .........................T..T GCGCCGAGGAGCTGGCCCCGCTGCGCGAAGCC 4088098 29 89.7 32 .............T......C....T... CGCTGCCAGTCCAACAAGGACCCGGACGTCAT 4088159 29 82.8 32 .....T......TT...........T..T GCGACCGGCGTGGACCGCGTCCAAACGCTCGC 4088220 29 75.9 0 ....G..T....TTT.T........T... | ========== ====== ====== ====== ============================= ================================= ================== 13 29 95.0 32 CTGCTCCCCGCGCCCGCGGGGATGGCCCC # Left flank : TGCGCGACGTCCCCAGCCCGCTCGGACACGGGGCTGCGGCTGGGCAGATGCTGTTGCAGGCATGACACTTCCTTGTTGTGGGCGCGACGGAGCCGCGCGTGGATGGGATGGCTGAACCTTGGCCCGCAGGGCTGTTAGCCCCGCAAGTCCCCGATCGCCCGGGGCGCCTCCCGGACACGGGCTGGGAGTGCACAGTTCTCCGTCGTGGCGAGATGTCGCGAATCTTCGGTAGTGCACCAGCAGGCCGCGACGCCCGAAGTGATGCCCTCATCCCGTTCCCGGACAGGGCGCCGACGCTGATGCCGCGATCGAGCCGGTACGCGACATGACGGCGCTGCGGCCGTAGGCGTGGCCGGACAGGTCTTGTACGAGACGGTGAGGACTACGATGCTCGCTTGCTGCCCCGCTAGGGGAGAGGAGCCGGTATGGCGCTTTTGTCGGAATCTGCAAAAGTCCACGGAAATGTGTCCGTCGAGCGATAAAGACGCAGGTCAGGAAGT # Right flank : CGTGCCCGAGTGGCCGCCCCCTGCCACCCGGTACAGCACCCGGACGGCACGTCACATCACAACAGGACAAACGTTTGCTGTAACAACACGCGGCCGCCCTGTCCGGAACCGTGCACCACGCCGCCGCGTCTATCACGGGCATGGCTGAGAGAACCGCGGAACGGGCCACGGGTATGAACCCGAAGACTGAGGGCGGTGCCGGATGCCTACTCGCCGGCCTCGGTGCGACAGCCGCGCCGCTTGTCTGGGCACCGCGCGCCGCGGTCAGCATCGACGGAGGATTCGAGGGCCATGCCCGCGATCTGAGCGTACTCTTCATCGATCTGCCGCTCATCGTGCTCGGCGGCGCACTGGTTCCGCTCTTCGCCTGGGCGTTGGCCGCCAGATGGGTGCACCGCCCCTGGGCCGCGGCACTCGTAGCCGTGGCCACGCTCGCGCTCGCGGTGTGGGGGCTCACCGAGTGGTGGACCCCCCGCCGGCAGTCAGACCCCGGTTACGGA # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4205673-4204913 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058977.1 Streptomyces sp. NEAU-sy36 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4205672 29 100.0 32 ............................. GCCTCGGCCGCCGGGTCCGGGGTGTTGCATCA 4205611 29 100.0 32 ............................. TCGGCCCGCTCCCCGAGCTCCCCGACATGGGC 4205550 29 100.0 32 ............................. GCCGACGCGATCAGGTTGAGGTGGGGCAGCTC 4205489 29 100.0 33 ............................. AGCAGCGGTGTACGGCTCGGTGTCACGTCGGTC 4205427 29 100.0 32 ............................. ACCTCAGACGGCGGGTTCTCCGGCCTGTGCTC 4205366 29 100.0 32 ............................. AGCGGCGACGGGTCGACCATGAACCCGGCGAC 4205305 27 93.1 32 ........--................... GCCGTAGAGGCTGGGCATACATGCCTGAGAAT 4205246 29 100.0 32 ............................. GTGGGCTTGCTCCATAAGAGCAGCCCAGCCGC 4205185 29 100.0 32 ............................. TACGACCTCAAGGCGGACACCATCGGCCTCGA 4205124 29 93.1 32 .........................T..T GCGCCGAGGAGCTGGCCCCGCTGCGCGAAGCC 4205063 29 93.1 31 .............T......C........ GCTGCCAGTCCAACAAGGACCCGGACGTCAT T [4205038] 4205002 29 82.8 32 .....T......TT...........T..T GCGACCGGCGTGGACCGCGTCCAAACGCTCGC 4204941 29 75.9 0 ....G..T....TTT.T........T... | ========== ====== ====== ====== ============================= ================================= ================== 13 29 95.2 32 CTGCTCCCCGCGCCCGCGGGGATGGCCCC # Left flank : TGCGCGACGTCCCCAGCCCGCTCGGACACGGGGCTGCGGCTGGGCAGATGCTGTTGCAGGCATGACACTTCCTTGTTGTGGGCGCGACGGAGCCGCGCGTGGATGGGATGGCTGAACCTTGGCCCGCAGGGCTGTTAGCCCCGCAAGTCCCCGATCGCCCGGGGCGCCTCCCGGACACGGGCTGGGAGTGCACAGTTCTCCGTCGTGGCGAGATGTCGCGAATCTTCGGTAGTGCACCAGCAGGCCGCGACGCCCGAAGTGATGCCCTCATCCCGTTCCCGGACAGGGCGCCGACGCTGATGCCGCGATCGAGCCGGTACGCGACATGACGGCGCTGCGGCCGTAGGCGTGGCCGGACAGGTCTTGTACGAGACGGTGAGGACTACGATGCTCGCTTGCTGCCCCGCTAGGGGAGAGGAGCCGGTATGGCGCTTTTGTCGGAATCTGCAAAAGTCCACGGAAATGTGTCCGTCGAGCGATAAAGACGCAGGTCAGGAAGT # Right flank : GTGCCCGAGTGGCCGCCCCCTGCCACCCGGTACAGCACCCGGACGGCACGTCACATCACAACAGGACAAACGTTTGCTGTAACAACACGCGGCCGCCCTGTCCGGAACCGTGCACCACGCCGCCGCGTCTATCACGGGCATGGCTGAGAGAACCGCGGAACGGGCCACGGGTATGAACCCGAAGACTGAGGGCGGTGCCGGATGCCTACTCGCCGGCCTCGGTGCGACAGCCGCGCCGCTTGTCTGGGCACCGCGCGCCGCGGTCAGCATCGACGGAGGATTCGAGGGCCATGCCCGCGATCTGAGCGTACTCTTCATCGATCTGCCGCTCATCGTGCTCGGCGGCGCACTGGTTCCGCTCTTCGCCTGGGCGTTGGCCGCCAGATGGGTGCACCGCCCCTGGGCCGCGGCACTCGTAGCCGTGGCCACGCTCGCGCTCGCGGTGTGGGGGCTCACCGAGTGGTGGACCCCCCGCCGGCAGTCAGACCCCGGTTACGGAT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //