Array 1 6879-5016 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFJC01000021.1 Microcoleus vaginatus FGP-2 ctg191, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================== ================== 6878 37 100.0 34 ..................................... CAAATGCAATTTGTGCAATCTCAATGTCATCCAA 6807 37 100.0 34 ..................................... CCACCCCAAAGCTTTGATTCTACTAACTGGAGAA 6736 37 100.0 34 ..................................... GGAAAAAATTTCAAGGTAGTCTCTCAGATATCGA 6665 37 100.0 34 ..................................... AAGAGCCGTCAAAGGAGCTAGCCACAAAACTAAA 6594 37 100.0 34 ..................................... GCGCAATTGCTTAGCCAGTGGCGGATCTCTAAGA 6523 37 100.0 34 ..................................... CTAGCAGATCAAAGGCTTGCTGGGATTTGTCCAC 6452 37 100.0 36 ..................................... AAGCAATTTTCGGATGTGCCCAGGGGAACGATTCAA 6379 37 100.0 42 ..................................... GCGCCCGTGGCAACACCACCCAAACCAAAAGCGGCAACGCAA 6300 37 100.0 37 ..................................... TTGAAAGAGGCTAGCGGTTTCAGCTTCGACGGCTCTA 6226 37 100.0 35 ..................................... ATGTGGAAAAAATCGCCCTCTACGCCGCGAGTTTC 6154 37 100.0 36 ..................................... GTACCTTCATTTGACTCCCTCTTCGCTTTTATAAAA 6081 37 100.0 34 ..................................... AGTATCCTCCAGCGGGGCGATCGCCTTTACCTTC 6010 37 100.0 36 ..................................... AAAAAATAAGTACATTAATGAGTCGGCTGATCTATT 5937 37 100.0 37 ..................................... CCATACTTTGGCGACAATTTTGTTGTGGCGGTAGTTG 5863 37 100.0 35 ..................................... AGCAGGCCTAGAACTGGTTGTAGACACGATCAAGC 5791 37 100.0 34 ..................................... AACAGGAATTTGCAAGATGGTCCTGGTATTGAGC 5720 37 100.0 33 ..................................... CGAAATTTCGGACACTTTCGAGAGGCTCATGGG 5650 37 100.0 36 ..................................... GCGCAACTGCAGCTCGAACTTGCAAAAAAGCCTGAG 5577 37 100.0 52 ..................................... ATTGACTCTCAAGTTGCCTGGAACAAAGCGGTGGCAGCCGCAATTAACCTAA 5488 37 100.0 36 ..................................... AAAATTCGCAGCGGTCGGCGATCGGGCAAACCTACA 5415 37 100.0 34 ..................................... CGAATCAGTCAGCGGGTTGCGCGGGGCGAAAATT 5344 37 100.0 34 ..................................... TTAAATGGGGGGCGGTTTGCAACCAAGAGTAATT 5273 37 100.0 37 ..................................... GTAAGTCAGGCGATCGCGGCAACCGTAAGCTCGGATA 5199 37 100.0 36 ..................................... TCTGGTGCTACTGTCGCACCCGCAGAAGGCGATATT 5126 37 100.0 37 ..................................... CGTCGGTGTCGTTTCGGCGATCGCACCAAGCGTCAAA 5052 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================================== ================== 26 37 100.0 36 GCCGCAATTAACCTAACTCCCTATCAGGGATTGAAAC # Left flank : GAGATCCAGAGCTAGAAGTAAAAAGGGAGAAAGAAGCTACGATATCAAGCCATTTTATAGAGGAAGTAGGGTGACAGTAATTGGTGCAATAACCAACAAGAAGGTCATCGCCATGAAAACAATGAAACAATCAATGAATGGAGAAGAGTTCAAGAAATTTGTGCAAGAACAATTGGTTCCCAAATTATGGAAAGGAGCGGTATTAGTTATGGATAATTTGAAGGCACACAAGGTAGAAGGTGTGGAAAAAATGATCGAAGCAGTGGGAGCAAGAGTAGTGTATTTGTCACCGTACTCACCTGAGTTTAACCCCATCGAACATTTATGGTGGGAATTAAAGGCATGGCTCAGGAGATTTGTACCTCGAAGTGTACAGATTGTGGAAAAACTATTGGAATTGGGTGTGAAATTATGTTCAAGTAAGCAAATCGAAAATTATTTTGCTCACTGCTGTTACTGTACCTCTTAGTCACGCAAAGTGCTGTAATGGTAGTGATTTT # Right flank : GAATAAAAGAGTAAAAAACAAATTAAGCCACGATAAACCTAAATTCCATCTTCACTTAAGATGACAGTGACAATTCGGCTTTTCAATCAAAGACTCAACCAAAGCATTCAAAGCAACCGCCGCCAACAACCCGCCGCCAAAAGTCCCCACAGTCGTAATATAAGCAACGCCCGATCGCACTAACCGCCGTTTCGCCACCGGAGAATGACTAAAACCGATCGGCATACCAATTACCAAAGCCGGTTGCAGTTGCCCACTCTCGATCGCCTCGCAAACCGCCATCAGCACAGACGGCGCATATCCTATCACCAATATACATCCTTTTTCCAGTTTCAACAACTTTTTAAACCACTCACCCTGCTGCCAGAATTCCTGTTCCGCTTCCGCCGCAGCATTGATGTGCGGGTCATCAATTAAAGTTGCAATACTTGTTCCCAAATGCGCCAATCTTGTCCCATCCAAAGCCGCAAAAACAGGCGGCACATCAGCCACAATTTGAC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAATTAACCTAACTCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 25431-25136 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFJC01000008.1 Microcoleus vaginatus FGP-2 ctg200, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================================================== ================== 25430 37 97.3 36 ...........................C......... CCAGCAGTCAGCACCCTAACTAAGAACTTCCGCCGT 25357 37 100.0 36 ..................................... TGTAGTCTCTTGAGTAAAAAATTGTGGTAAAAAAAC 25284 37 100.0 75 ..................................... TTTCGGAAGTATTCACCAGAGGAGGAGACAGGAGGAAAGAGGGTATTCTTCTCCTGACTCCTGACTCCTTCAAAA 25172 37 94.6 0 ....C..T............................. | ========== ====== ====== ====== ===================================== =========================================================================== ================== 4 37 98.0 49 GCCGGAAACAACCTAAAACCCTATCAGGGATTGAAAC # Left flank : CACCCCGTACAACTCCTCCCCGGCGCTATCTCTGAAATCCTGGCTTCTGTAACCGATACAGGCGTTTTGACTCTGGCGGATCGCTACGGTTTGATGGCCGCCACGTTCGACGACTCTCTGAATGACGAAGACAGAGGCTGTATCAACCGCTTGCTGCGGGCAGTGCTCAGAGGCCGAGTGAAAGTAGTCAACGAACTTTCAGCAGCATTCTAATCGGGATTGGAAGTTTTGTTCTGAAGGCAAGGTGAGTCAGCGGTAGATGAAAATAGTGGAAACTCAGGCAGGAGTGGAAACAGCAGTAATTTGAATTCGATTTAAAAGTTTTCTCCTCTAACTCAACAACGGTTTATTTGTCAAAGCAGCCTTTACCGGCTGCTTTTTTTTTTGTTTAATCGCGGATTTCCAGGTTGTACTGGCGACAGAGGGCGATCAGTTTTTGTTGGAAGCGATCGCGCACATTGAAACTTGTGTTTTAACCACGTCTAAAGCTTCAATTTTGG # Right flank : TTTCGGAAGTATTCACCAGAAGAGGAGACAGGAGGAAAGAGGGTGTTCTTCTCCCGACTCCTGACTCCTGACTCCTTCAAAAGCCGGAAACAAGTTTACTTCCAACACTTGTCGCAGCACAGGTAGTGGTGATGGATAATCTCAGATTTGATAAAAGTGGTCAGATTCAGGAATTGATTCAAACAGCAGGGTGTAGACTATTATATTTACCGCCATACTCTCCAGAGTTTAACAAAATTGAACAAAGAAGAGTCTTGGCTAAAAAGTCAAATTCGCAAACAGCTTGATGAGTTTGATTGCTTACATTTTGGCGAGCCTTGGATGTCTTGCCTTGTGTCCTAACACGGGCAGTTGCTATATGTGATTTCCCAGATTATTCAGTTGAAAAAATACCAAAATTATGACCACTCAAACAACTTCTCCACTCCTACTCAGCCCCTTCAAAATCGGAGATTTATCCTTAAAAAATCGGGTAGTCATGGCACCCCTAACGAGAGCCA # Questionable array : NO Score: 7.41 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:-1.34, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGGAAACAACCTAAAACCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.90,-3.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 194360-193285 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFJC01000010.1 Microcoleus vaginatus FGP-2 ctg197, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================== ================== 194359 37 100.0 34 ..................................... TTTGCTCCGGCGACATCCATCACGATCCAAGTGT 194288 37 100.0 38 ..................................... TCATTTTTCAACCACTCACCACGAAACTTGTAATCCCC 194213 37 100.0 44 ..................................... TGTAGTGTAGTATTCTCGATCATTGACTTGCGTATCTGCGCCAT 194132 37 100.0 49 ..................................... GCATCTGCAATTTCCCAGACGGAAGCTACTAGCGGAAAAACCGCTAGCA 194046 37 100.0 45 ..................................... ATATCTAGTCGCAATCTGTGAACCCTATTGATTAGGGCTTGTTTT 193964 37 100.0 40 ..................................... TTGAATATCTGGTACGCCCATTTTTCACGAGGATCGAAAG 193887 37 100.0 53 ..................................... GCATCCGCCCAACTAATGCCAATCCGTCGGGACTTTTCACAAATCTTGATCGG 193797 37 97.3 37 ...T................................. AGTTTGACCGCTCCTTCAAGCATTTCGATAATTTTCA 193723 37 100.0 50 ..................................... AAAGCAGCATCAACGCCACGAGCACAACCGACAAAGACCGGGGAACGAAG 193636 37 100.0 42 ..................................... TTGCGGTGATCTTTGCTGATGTAAATGATGCGATCACAATCA 193557 37 100.0 47 ..................................... GCTAGTTCATGTGCTTTCAAAACTCGAATTATGTGTTGTACTTCTCT 193473 37 100.0 36 ..................................... TTTAGACTTAGAAAGACATAACTTAGTTTGATTTTG 193400 37 97.3 42 C.................................... ATTACCAGCCGATTGAAATCTTTTAAGGACTGGGTTTTGATA 193321 37 97.3 0 T.................................... | ========== ====== ====== ====== ===================================== ===================================================== ================== 14 37 99.4 43 ACTCCCCACTCGTTGGGGAAACTAATTGAATGGAAAC # Left flank : GGTTTACAAGAATCAGAGGTTTTTGCTGCTTGGGATACTCAAAATAAAGATGAGTGGAAACAGCGGATTTTAAGCTGCATGAATTTTATTGCCAAACCAGATTTGCTACAAGAATTTACATCGCTTGAAGAAGCTAGTTTGATGGCGAAAGTGCATGAGGAATTAGTAGAGGCGATCGACCCTAACAACATTCCAACCTAAAATTGATATATCGCAGCATCCGCTTTTATCCGGTGTCGCGCCATACTTTGAGTCAGGAGGAAACTTGGGGTGTGGGCCCATCAATTACTGAGTTGCCGAAGTCTGTGATTATCTGAAACTTGCGAGGGGGTACGCAAATCGCTAAAATACTGATTCTGCGGTTGACCCCCTCGATATATTGCTGGACAAGGGTTTCAGCTATTTTGAGCCGGAGATGGGCGGCGTTAGTCAGGAAAATTTTCGACCCCCTCGCAAACTGCCTGTAGACATCTTGCGCTGTATGAGGTTTAATGTGGAGG # Right flank : GCTAAAACAAAATTAGTGGAAGTCTTCTATTAATGCGACAGTTTAAGGGCAACCATAAATAGCTGTTGACAAAAGACTAGATTTCTAATAGTGTAGTTTTGGGGGGATGCCTTTAGGGGACGCCTCTACCGCATAGAATAACGTCTTTAAGGCATCGTTCTATCCCCCAGTCGAAGGGTTACGCCACTTACATTGTCACTGTGTAGCAACTTACATTGTCACTGCCTAGAAATAGGTAGCTAAGACAAATTTAGTCGAAGTCTCTATTAATGCGGAATCGAAGGAGGCTTCGACCCCCCCCGACACCGCAAACAGAAATTAAAAAATCAGAGCCTTCTGTAGTGCCAAAAGCTCTAAATCTTTAACCTCTGGAAAACTCCAAAGACCAACTTTTACCACTCAAATTTCTGCAATCAATCCGAGTTGCGAAGAATTAACAAGCACAAAAAAAAGCCCCATAATCGGGGCAAAATATAACTATTCTCAGTCGTTGGGTGGGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTCCCCACTCGTTGGGGAAACTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //