Array 1 65117-61178 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBTN01000004.1 Acinetobacter baumannii strain NBRC 109757, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 65116 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 65056 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 64996 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 64936 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 64876 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 64816 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 64756 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 64696 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 64636 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [64585] 64584 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 64524 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 64464 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 64404 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 64344 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 64284 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 64224 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 64164 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 64104 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 64044 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 63984 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 63924 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 63864 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 63804 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 63744 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 63684 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 63624 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 63564 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 63504 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 63444 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 63384 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 63324 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 63264 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 63204 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 63144 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 63084 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 63024 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 62964 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 62904 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 62844 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 62784 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 62724 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 62664 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 62604 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 62544 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 62484 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 62424 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 62364 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 62305 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 62245 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 62185 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 62125 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 62065 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 62005 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 61945 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 61885 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 61825 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 61765 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 61705 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 61645 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 61566 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [61540] 61506 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 61446 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 61386 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 61326 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 61266 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 61206 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTAA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [50-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //