Array 1 64190-62039 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJJN01000007.1 Campylobacter lanienae strain P0121 ERR460911.12227_1_93.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 64189 37 100.0 33 ..................................... CGCAAAAGCTAGAGAGCGAATATCTGATTTTGC 64119 37 100.0 36 ..................................... GAAAAATTCTAAGGTGCTAAGGTCAGCATTCATCAG 64046 37 100.0 36 ..................................... CACTTTAGGCGTTATTAGTATCGCGGAAAGGCTTAT 63973 37 100.0 35 ..................................... GCTAGAACAAAATAAGACTAAAATTAGCAAAGAGC 63901 37 100.0 36 ..................................... TTTAATGATATTTCTAAATCTCTATAAAAATAATTA 63828 37 100.0 37 ..................................... ATGGGGTAAGTGTGAGTTATCAAAGCTCACCATATAG 63754 37 100.0 36 ..................................... CACTAATTCCTAAATCAGTATAAACGCTTTGTAGAG 63681 37 100.0 38 ..................................... TACTTTACTTCAAGCAGCAATTAGGGGAGCCACTGGAC 63606 37 100.0 36 ..................................... TTTATTATGCTGTTAGTAGTATTAACGCGGTTACCA 63533 37 100.0 35 ..................................... CAAAAAGCCGTAAGCGATTTTACACAAGCGAGAAG 63461 37 100.0 37 ..................................... ATTTAGTTAATAGGGCATCTTTTGATATATCAATCAT 63387 37 100.0 37 ..................................... GAAAAAATAAACGGCGGTAAAGATTATGTTTATTATT 63313 37 100.0 37 ..................................... AGAAAAAAGGCGAGAATTAGAGCTTAAAACACTTCAC 63239 37 100.0 37 ..................................... TTCTGTCATCATTTCGCCTTAAATAAAATTAGTTCAC 63165 37 100.0 35 ..................................... CTAAGAGCCGGATTTTTTGAAGTTGCTAAAATAGC 63093 37 100.0 37 ..................................... CTATATTTAAAATATTCATTAATCATTTAGTATCCCT 63019 37 100.0 36 ..................................... GCCACTCGCCATCTTGTTCTAATGTGAGATATTTTA 62946 37 100.0 36 ..................................... TAAAAACATTAAAGCAAGAAAACACGCAATTAAAGG 62873 37 100.0 37 ..................................... ATTATGATACCGAAGCTGAAAGAATTAGGCAATATCT 62799 37 100.0 35 ..................................... TAATTGATACCAGTTTAAGCCTTCATTTATGTTAA 62727 37 100.0 35 ..................................... GTTCTATCAAAGGGATTATTATTAAAATTATCTTT 62655 37 100.0 34 ..................................... CTTAAATTAACCTTAAAAATATTAGTCACTATTA 62584 37 100.0 36 ..................................... AGCTAAAAAAGATTTTAGAGTTTTCTGCCCTTATAG 62511 37 100.0 36 ..................................... GTTAAATAACACAGCCTTAAAAAGTGGGCTTAAGGA 62438 37 100.0 36 ..................................... TTCAGTATTTACCCATTTTCTGAATTCTTTTGCTGT 62365 37 100.0 36 ..................................... AAAGGCATAAGATGGATAGAGTAGTAGTCCAGCCAA 62292 37 100.0 35 ..................................... AAACTAGCAAGGCAATATCAAGGGATAAGCAATCG 62220 37 100.0 36 ..................................... TTCAGACGCTCAACCAACATTTACGGCTAATAACAT 62147 37 100.0 35 ..................................... TTTAAATGCTCTTTTCTCAAATGAGTTAGCAATCA 62075 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 30 37 100.0 36 GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Left flank : GTTATAAGAGAGAGAAAACTTCTCTTACTCTAAATCTAAAATAAGAGAAAATGAAGTTAAAGATAAAGAGATTTATTTGGGGAGATGATTAATAGCAATAATACATTATCATAATAATTATTTATAAATCTAAAAATTTTTTTTAATTTTTGATATTTTTAAATAATTCTATTATTTATAGCTTGAGTTAATATTTCCATTTTACTCTCCTAAAAATTGTTTAAAAACTTCTCTACATTATCACGCTCAAAATATTTATAATATTGTGTAGAGATACGCATTAAAATCATCTCTCTCTTAAACTTATCAGCTCGAGCTCATCACTTTGATAAATTTTATATAACGAAGCATTTACTAAATCTATATCATCAAAATTAGCCGCTATACCTAATTCTGGGGCAATCTCATCATAAAATAGCTCTATTTGCTCCCCTTTTTTGTAAGCACAATTCTAAAAGCATTTATAAAGTCTTGAGTGTTTGTAAAATTTTTGTATTTGT # Right flank : TCCGCACAAAATGCCCTATTTTAGGGATTTTGCGCTTAGTTAATTGTAAAAATTTTTCCACTTAGAAAAAAATCGCAAAAAATGGCGAATTTGTGGAAAAATATGTTATAATTCAAGCGCAAATTATACCATAATCTAGCTTATAGCGTTTGAAATCACCACAAGGTGTTTTCATATCGGGGCAACTGCCTTTGGCACCCCCGGTTATTCTCTATCATCGCAATAATTTTTAAACTCACATTGCGCGCAAGCTGTAATGCTAGCTGAACTTTGTGGGAAATATCCTTTTTCTAATAGATCTTGAATTTGTGTTAGTGTTTTATCAAAATAAGCTAAATCCTCTTTATAAATTTCAAAGATTTTAAATTTTAGATTATTTGAGTAGCATAAAATCACCCTATGAAAAGGCTTTTTAAAGCGCTTACTAGCAAGTTTAGAATATGCTATAAGCTGCATTTTTGCGCCCTTGCTTAAAATTGGCTTTGATTGGTTTTTAAACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //