Array 1 108193-107615 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOAH01000001.1 Escherichia coli strain BG1 NODE_1_length_326811_cov_45.9013_ID_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 108192 29 100.0 32 ............................. CGACAAAATTCTCAAAACTCGATCAGGAAAAT 108131 29 100.0 32 ............................. CCACCGTTTTCGCCCACCAGGGCGCACAACCC 108070 29 100.0 32 ............................. GAAAAAGAGAAGGTAGAGAAAGCGGAATCTGG 108009 29 100.0 32 ............................. CAGGTCTATCGGGCGATCAATAAAATCGGTCA 107948 29 100.0 32 ............................. GCGCACCGTTGCGTCGAAAAGGCGCTGGAGAT 107887 29 100.0 32 ............................. TACGCTTACACAACGGGCGAATATTTTAACGG 107826 29 100.0 32 ............................. GAACCCAATAGTGAAATACAGCATCATTTTTT 107765 29 100.0 32 ............................. GGGCAAATATAAATTCCAGCGTGCTTCATGAA 107704 29 100.0 32 ............................. CGGCGTAGCGACCTTTGCTCTCAATTTCGTTG 107643 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAACAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAATCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAGGTTATGTGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCCAACCCATCAAGACGCCTTCGCCAACTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCAAACCTGACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCAGGATTGGTCGTCGCGGCTATTCCCTGACTGCGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 125431-123694 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOAH01000001.1 Escherichia coli strain BG1 NODE_1_length_326811_cov_45.9013_ID_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 125430 29 100.0 32 ............................. GCATTGACGCTTTAAACGACGACGGACGCCAC 125369 29 100.0 32 ............................. AAAACAGCCTTTAGATTAGTACCTGACGACCG 125308 29 100.0 32 ............................. TAAACGCACCTGGCGCGCCACTTTATCAACAA 125247 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 125186 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 125125 29 100.0 32 ............................. ACGGCGTGGATTGAGGGACGGGTATTTGGTCC 125064 29 96.6 32 ............................T AGATCGCGCCACGAGGAAACGAATATGAACGG 125003 29 100.0 32 ............................. TGCCGCCAGGCCAGCGACACATCAGACAACTG 124942 29 100.0 32 ............................. GTCTGTGATGGCCTGCTCGTGAGTCCGCGGCG 124881 29 100.0 32 ............................. TTTTGATTTCATTAACGGCGCTCCCCATATTT 124820 29 100.0 32 ............................. TGCGCCGTAGCGTGTCCACCTATTGTAGTAAA 124759 29 100.0 32 ............................. ATACAAACGCGGTGTTTATCAATATGAATTTT 124698 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 124637 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 124576 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 124515 29 100.0 32 ............................. AAAATTCTGTGTTTCGACCATTACTTCGGTAA 124454 29 100.0 32 ............................. ATTCTTGATCACGCTTTTACCGAAGTAATGGT 124393 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 124332 29 100.0 32 ............................. CGGCGTTCCGTGCGGCAATTGGAATCACACCA 124271 29 100.0 32 ............................. CGTTCTGAATCCGATATTCTTCAGCACCTTCA 124210 29 100.0 32 ............................. AGCGTCAATCAGCGCGTCTATCGCGTCACTTT 124149 29 100.0 32 ............................. ATTTGGGGGTATGAGAGCGCCGAGCCGTTCGG 124088 29 100.0 32 ............................. GCTCCCTGTCAGTTGTAATCGATAACGTTGAT 124027 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 123966 29 100.0 32 ............................. CCGAGCCCGATTATCGGCATGAGCGATGCGGA 123905 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 123844 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 123783 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 123722 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 29 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATGTTGAATTAATATCTATTAATTTTTTCTTTAGGTTAATAGTTTGTTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGAAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATTACCGTTTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //