Array 1 1290658-1289762 **** Predicted by CRISPRDetect 2.4 *** >NC_021900.1 Streptococcus lutetiensis 033, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 1290657 36 100.0 30 .................................... GCGATGTTGTTCAAATCGTCTCAAGTGTGA 1290591 36 100.0 30 .................................... AACACTTCTTTAAGCATGTTAGTTTCTTCA 1290525 36 100.0 30 .................................... ATGTAGCAGTAGCTAACTGAGTCATCTTTT 1290459 36 100.0 30 .................................... GTAGGCATTTTCTTAATCCACGATGAGAAA 1290393 36 100.0 30 .................................... ACGTGGATAACGACAGACCCATTCCCAAGT 1290327 36 100.0 30 .................................... AACGCAATCTATGGAAAGGGGTGGTAAAAA 1290261 36 100.0 30 .................................... CATATGAACCAGACCTATACGAATACGATT 1290195 36 100.0 30 .................................... CGAACCACGGCCGCCAGAACAAACTACGTT 1290129 36 100.0 30 .................................... CAGGTACAGTTAAAGCGCCACCCGTTTCAC 1290063 36 100.0 30 .................................... AAGAAAACAAACCGGAGTACGTAATCCCAA 1289997 36 100.0 30 .................................... TTTGTGACGAGTGTTTCAAGTGGTGGAAAG 1289931 36 100.0 30 .................................... GAATTAAGTTGACGTCAACTGTCGCAAGTG 1289865 36 100.0 32 .................................... ACCAATTAGGTTTAACTGTTGACAGTCGCATG 1289797 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 14 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AAACTTTCTTTATGATTAAACCAGATGGCGTGAAACGCGGACTTGTTAGTGAAGTACTTAAACGTATTGAACGTCGTGGTTTCAAAATTGAAAAATTAGAAATGCGTATGGCAACTCCTGAGTTGTTAGAAAAACACTATGAAGACTTGGTTGATCGTCCATTCTTCCCACTAATCGTTGACTTTATGACAAGTGGTCCAGTGATTGCTGGTGTTATGTCAGGAGAAGAAGTAATTACTTCTTGGCGTACAATGATGGGTGCAACAAACCCTAAAGAAGCTCTTCCAGGAACAATCCGTGGTGATTTTGCTCAAGCGCCAGCTGAAGGTGCTGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATCAGTAGAACGCGAAATTGCCCTTTGGTTTGGGGAATAAAATAATTAAGTATGGAATTATTCGGAGCTGAAGTCAGGCTGAGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAAATGGTCCACGAG # Right flank : TGTGGCTACTAAATATGAATACACCAAAACCCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGTAATGAGTTGAGTTTTTATTACCTTTGGTTAAATAATAGCGCTTTCTGCAAAACTTGTAAAATGATTTGCGGTAGCTGATTTTAGCGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGAAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 1291897-1291260 **** Predicted by CRISPRDetect 2.4 *** >NC_021900.1 Streptococcus lutetiensis 033, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1291896 36 100.0 30 .................................... GCATTAAGAGAGAAGCGAGAGTTTAGAAAA 1291830 36 100.0 30 .................................... CATTAGCATTAAAGAACTTAATCGATGGCA 1291764 36 100.0 30 .................................... TTGAAAAATTCAAACTAAAAAGCACAGCCA 1291698 36 100.0 30 .................................... GCAGCTAGGAGACCTATATGACTAAACTAA 1291632 36 100.0 30 .................................... GCTCTATGGCTTTTGATGGTAAACCATTGA 1291566 36 100.0 31 .................................... AAAAAAGAAAGAGCTTACGCCCTTCGCTTGT 1291499 36 100.0 30 .................................... TCCGTGAATCTTACAAACGTCGTTACGGCG 1291433 36 100.0 30 .................................... CAGTTGATGATTCGTATTTTGCTTTCATCG 1291367 36 100.0 30 .................................... TTGTTTAATCCCACCAGACAACACCACTAA 1291301 36 88.9 0 ....................T...AAA......... | T,AAT,C,A [1291265,1291267,1291272,1291274] ========== ====== ====== ====== ==================================== =============================== ================== 10 36 98.9 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : TTTCACAAAGAAGAAGGTGGAAGTTTTTGGGTAGAATTTCCAGGATTCGGTGGTGAAACTGAGGGTAAAGATATCGAGGAAGCTATGAAGAATGCACGTGAAATGCTTGAGAGTTCGTTAGCTGCGTATTTAGATGAAGGACTTGCTCTTCCAAAAGTTATTGATATGAGTGAGTTAACCGTTGATGATGGCTTCATTACTCTGATTCAAGCTGATCCTTCACCGTATTTAAAAAAGACAAAAGCTATTCGTAAAAATGTTACGGTAGCAGAATGGTTAGTCAGATTAGCTGACTGTGAGCAGGTAAACTATTCTGAGGTTTTAACAAAAGATTTGGAGAAAAAAGTTGCAACTATAAGTTTTAAGATTGTTCAGGAACGTTGAAAAATCAAGGTTTTTAAGGTATAATAAAACTAACATTATGGAGCTGTTCGAGACTGAAGTCTGGCTGAGACAAATGGCGCGATTACGAGATTTCGTGAGAAAAATTGGTCCACGAG # Right flank : TGTAGTAAAAATTACTTTCAATGTTTTTCAAAAGTTTTCTTTTATGGTAAAATTGAAAGTGAATTTATTTTAGTTAGATAGGTTGGATTGTTTACATGGAAAAAACTTTCTTTATGATTAAACCAGATGGCGTGAAACGCGGACTTGTTAGTGAAGTACTTAAACGTATTGAACGTCGTGGTTTCAAAATTGAAAAATTAGAAATGCGTATGGCAACTCCTGAGTTGTTAGAAAAACACTATGAAGACTTGGTTGATCGTCCATTCTTCCCACTAATCGTTGACTTTATGACAAGTGGTCCAGTGATTGCTGGTGTTATGTCAGGAGAAGAAGTAATTACTTCTTGGCGTACAATGATGGGTGCAACAAACCCTAAAGAAGCTCTTCCAGGAACAATCCGTGGTGATTTTGCTCAAGCGCCAGCTGAAGGTGCTGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATCAGTAGAACGCGAAATTGCCCTTTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //