Array 1 460851-460552 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NAQP01000043.1 Dolosigranulum pigrum strain KPL1939_CDC4792-99 NODE_76_length_460712_cov_96.464218, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    460850	    36	 100.0	    29	....................................	ACTCGCCGGATCCAACTCCATATTGACAT 	
    460785	    36	 100.0	    30	....................................	TTGTCTCATCTCTTCCCTCCTAGATGTACA	
    460719	    36	 100.0	    30	....................................	CCTGACGAGGATACATATCGCCGACTTCAT	
    460653	    36	 100.0	    30	....................................	AGACGAAAATAAAACTTTAAAAGATACTGT	
    460587	    36	  91.7	     0	..............................T...TT	|                             	
==========	======	======	======	====================================	==============================	==================
         5	    36	  98.3	    30	GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC	                              	       

# Left flank :   |
# Right flank :  GATTGTTCAGATAACTTATGAAATTTAGAGTTATAGTGTATTGATTTTTGATGTAATAATTAATAAAACATATAATCCTGTTTAATTTTCTAGTCAAACTAGCTAATTAAATAGGATTTTTGTTTATTCAGGAGATAAGGTATTTGTGAAGTATTTCCCGTGACTATTAGTCGAAATTGTGGTGGGAATATGCGATAATATAGAGCAAGGAGTGATGGCTGTGAGTAAGGAATTGTTAGTATTGATTGATTATGAAGTGGATGTATTAGATACGTTTCGAGAGATGGCTAGTGAATATCAGTTGGTGAGTGAGTTTGAGGAAGCTGATTTTTCGAAGGTTGAGATCGTACTGGGTTGGGATGAGCGGTTAGTTGATGTGCTTGAGTCTGGTGAACATCAATTAAAGTGGATTCAGTTATCGACAGCTGGCGTGGATAAGTTGCCACTTGATTTACTAGCGCAAGAAGGGGTGCGGTTGACTTCGGCGAGCGGGATGCATA

# Questionable array : NO	 Score: 5.97
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.30,-2.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [78.3-0.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.64,4.91   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//


Array 1 6-173 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NAQP01000001.1 Dolosigranulum pigrum strain KPL1939_CDC4792-99 NODE_1_length_72026_cov_98.440994, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
         6	    36	 100.0	    30	....................................	GTATAGGAAAGGTACTTGCTGAACAACAAG	
        72	    36	 100.0	    30	....................................	CCTTTTACTGCTAGGAATTCCGCAAACTCA	
       138	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         3	    36	 100.0	    30	GTTTTGGAGTCATTCAAAACAACACGGCTCTAAAAC	                              	       

# Left flank :   ATCAAG
# Right flank :  CCTCGCACAGTATTTCTTTTCTAAAAAATCATGATTTTCATAAGAAATTTGCACAAAATTTCGTAATCGCGCTATTCGTCCATGCAAAACTTCAGCTTTGAACGACTCCTATTTTTCTAGTTTATCTTCTACTTCATTTTACCATGTTTGATGGTTAAAAAGAAGTCCGAATCCAGGATATATTGTGTAATATTGGCATCAGTCGGTTTTGGTTCGATCATCAGCACATTCATCTGTAACAATGAAACAAACTGTGCCATTTCATTAAGCTCCTCGGTTGTAAAGTATGAAGCTGCATTTACAAGTATTAGTAACCTTTTATTTCGCAAATATTTAAAGACTTGAAAAATTTCCAACACCTTTTCAAATAATGTATCTGTATCAACTTCTATCTTCACTCCTAAAGCGATGAGTACTTCCTGGATTGTAATTTCATCAAGTTCTAAATCCAATTCATGATTCAGTACCTCTGCATTAATCAGTTCAGTAATTTGATTAGT

# Questionable array : NO	 Score: 2.67
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTGGAGTCATTCAAAACAACACGGCTCTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.20,-2.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [6.7-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.37,0.27   Confidence: LOW] 

# Array family : NA
//