Array 1 1-538 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGGQ01000041.1 Streptococcus sobrinus TCI-119 contig00041, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 1 36 97.2 35 ......A............................. GCTTTGATGTAGGTTGCGATTGGTGAGATGTAGCG 72 36 100.0 36 .................................... GTGAAGGCTTTTTTGTGGTCCTCAACAGCTTCTAGG 144 36 94.4 36 .......A.......G.................... TTTACCTTGGCCAATCTTATGTTAGCCCCTTTCCTT 216 36 94.4 36 .......A.......G.................... TTGATTAAAGATAGCCGTCACTTCTTCGGTTTGTTT 288 36 100.0 35 .................................... TTGTCATTCATAGGTTGACCGTTCGTTAGTCGTTG 359 36 94.4 35 ........T...................G....... ATTAAAACTTCGCCTCGTCGGTCAACTAGTTCATC 430 36 91.7 37 ......AT..T......................... TATAGAGTTAAGGCCTTGTCGCCTCTACGAACCAAGA 503 36 91.7 0 ...............T..............A....T | ========== ====== ====== ====== ==================================== ===================================== ================== 8 36 95.5 36 ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC # Left flank : | # Right flank : TTATCACACCAGTGTATTTTTGCGATAGGTGAATCGCTTTCCTATCGCTGCTTCTGCAGGCTTAGACCTTTCAATCGGTTTTTTAGGAGAAATATCTTCAAAAAGGATTTGACTTTTATCGCCGAAAGGTTTATAATCAGCCAAAAATATAAATAAAAAAAGGGCGCCTTTGCGGTGAAAAATACTTTTCAGCCGGAGGTGCCTTTTCAAATAGAGAAATGATGAAAGAACTAAGATTATTTTTTAAAAGAACAGCTTTGCCGGCGAATGTGCTAGCGGTAAAGCTGCAGGGTTATCTGATGGGTCAGATTTCCGATGACTACGCCGAATTTTTGCACCAGCAGGAAACCAATCCCTATGCCTCCTTCGTAATAGATAGAGGGGATCAGCAAGTCTGGACGGTCAGTCTCCTGACAGAACAGGCTTGTGAGCAGCTTCAAGAAGGCTTGCTGTCTCTGCAGCATATTCGACTAGACTCTTATGCCGAGCTTATTAGCATT # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC # Alternate repeat : ATTGAATACCCCATAGCCTCGTAAGGGGACGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.00,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 1731-2263 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGGQ01000237.1 Streptococcus sobrinus TCI-119 contig00237, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 1731 36 100.0 36 .................................... AGTCATACGTATTTACCTCTCAATTATTTAACTTTA 1803 36 100.0 35 .................................... TTAACTGCTGAAAACAGTTCGGTGTTTTTCATTTC 1874 36 94.4 34 ...............T...T................ GCGTCATCGTTAGGTTTAACCTTTGTATGAGACA 1944 36 97.2 34 ...............G.................... TGTTCAGTGTCCGGGTCATAGATTTTTCCGTCAA 2014 36 94.4 35 ......A..........T.................. AGTAATTCTTCATGGTCTTTATCACTCATCTCATG 2085 36 97.2 35 ...............G.................... AATCCAACAAACGTTCCATGTTCTGTCATACCTTT 2156 36 97.2 36 ......A............................. CCTTGCCAGCCTTTTGACTGGCTCCTTTCTTTATCT 2228 36 94.4 0 ............G..T.................... | ========== ====== ====== ====== ==================================== ==================================== ================== 8 36 96.9 35 ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC # Left flank : ACTCTCTGATAAGAGCCTTTAAAGAAAAAGATCCCAATTGCTATCTGGCTAGTTATACGAGGAGGTGAAGCCATGGGATGCGATTTTAATTTGACGGCAGAAGAACTGCTGTTTGCCAGAAATTATCAGCTCTACTGCCTAGTGATTTACGACATTGCAAATCAAAAGAGACGACTCAAATTGGCACGATTGCTGGAAGGCTATGGCAAGCGGGTTCAGAGATCCTGCTTTGAGGTAAAACTGAGCCAGAAGGTTTACCGTCGGCTGCTCCAGGCGCTTGAAGACTTTTACGAGGAAGATGAGAAAGACTGTATCACACTTTATAAAATTCGTCGGGAAGAGAGGGTCGTTTTCAACTCTTATGATGAGCCAGAAGAAGAGACACAGACGATTATCTTATGATTGCAAAACCTCTATGAACATGATAGACTGTTATCGGATAGTTTCAAGCTGAGGCACAAGATATAGCAGTGCCTGTCTAGACTGACACAAAATATGCT # Right flank : CATATAGTTCATCATGTAAGGG # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC # Alternate repeat : ATTGAATGCCCCATAGCCTCGTAAGGGGACGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.00,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //